mRNA_P-littoralis_Contig72.81.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig72.81.1
Unique NamemRNA_P-littoralis_Contig72.81.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 322 bits (826), Expect = 5.490e-102
Identity = 185/429 (43.12%), Postives = 251/429 (58.51%), Query Frame = 1
Query:  115 NFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKGTAAAGQQ 1398
            N T+ E+ +V   LL   S +G L HG++K  A  F C W TISR+WKR     ++  +  ++ S  K  SGRK     +L +++A  P  DRTT++R+A  + +P  +L R      L  HS+ LKP LTD  K   L+W  + V           D   +VH+DEK FY+ +  +  YL  GE PP R  QSKRFITKVM ++AVARP  N   +  FDGKI  W FTE VP  RNSRNR +GT+VT  V V++DTY+  L+  VIPAIK KWP A R   I IQQDNA+P      + +L AC + G+DI +  QPPNS D N+LDLGFF +IQSLQ+RTR RTID+LI+   +AW + D + L   + +LQ+CM + +   GG N YK+PH+ K    + G  +P  +    + +  G A  G +
Sbjct:    7 NLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRK-KKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFVGP----DLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIR-SGGNNNYKVPHMKKAPMMKQGR-LPDAIECPRDVFDHGLALMGNE 427          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.820e-94
Identity = 174/429 (40.56%), Postives = 247/429 (57.58%), Query Frame = 1
Query:  109 RKNFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKGTAAAG 1392
            + NFT  ++ +V  HLL   + +G L +G+++  AA F C W+T++RLWKR      +  +  ++ S +KG +GRK     +L E++A  P  DRTT++ +A  + +P  TL        L  HS+++KP LT+  K   L+W     R G      VHD  D+VHVDEK FY+ +  +  YL  GE PP R  +SKRFITKVM ++AVARP  N   N  FDG+I  W FT+ VP  R+SRNR + T+VT    VT+DTY+  LI+ VIPAIK KWP     R I +QQDNA+P      E +  AC+S G+ I+++ QPPNS D N           +LQ+RTR +TID+LI    +AW   D   L   + +LQ C+ +++   GG N YK+PH+GK K A+ G  +P  +    + +  G AA G
Sbjct:    8 KPNFTPQQRTDVCHHLLTLVARDGKLPYGSFRNVAAQFACNWQTVARLWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFE--RLG--PDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAAR-ILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMN-----------TLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVR-AGGGNNYKIPHMGKKKLAKQGL-LPESVECPRDVFNFGHAAIG 417          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR)

HSP 1 Score: 302 bits (773), Expect = 1.330e-93
Identity = 172/426 (40.38%), Postives = 248/426 (58.22%), Query Frame = 1
Query:   55 PGCW*DVSAAGSAAQAPKRKNFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHD-FDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCV-EVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAG 1326
            PG +  ++A+ +  Q  K+KNFT   K  +   LL    NG L  G     A  F    +++SR+W   K    A    PNL+       GRK   ++   E + D P   RT +R LA+AL +   +L R +    LR HSN +KPYL+ D K   L++ L  +  G  A++   D   D +H+DEK FY+ K  Q++YL+  E  P R  +SKRF+ K+M +AAVARP ++  +N  F+GKI +W F  + P  RNS+NR AGT+ TK +  +TKD  ++ LIE ++PAI+EKWP ++  + I+IQQDNAKP    + ++ +EA    GFDI+L  QP NS D N+LDLGFF +I SLQ +    TID+ +S VE A+       L KV+ +LQ CM +++ +CGG N YK+PH+ K+K  R G
Sbjct:   77 PGSY--IAASENTRQPMKKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRK--KIQVNLEDIKDIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLASKFSFDNMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKWPCSS-SKMIFIQQDNAKPHLGINDDEFVEAAKIDGFDIRLCCQPANSPDMNVLDLGFFRAIDSLQHQKAPSTIDEFVSAVEKAFDMFPSEDLNKVFLTLQLCMVEVIKICGGNN-YKIPHMNKEKYVRNG 496          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 297 bits (761), Expect = 1.100e-92
Identity = 176/422 (41.71%), Postives = 243/422 (57.58%), Query Frame = 1
Query:  115 NFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 1377
            N T  ++  ++  LL  S NG +  G    A A +     TISRLW+ +K  +       NL SG  GN GRK  + +ELR ++   PL+ R T++ LA ALG+    + R L     R HS+ +KP LT++ +L  +++ L              D  D VH+DEK F    + + +YL   E  P+R+ QSKRFI+K M +AAVARP ++      FDGKI +WAF EE    R S+NR  GT+V + VE V ++ YKA  I  +IPAIK KWP + + RTIYIQQDNAKP    D  D++ A  SGG+DI++  QPPNS D N+LDLG+F SIQSLQ +T  R ++ L+  V +A++A     L K++ +LQ CME I+   GG N YK PH GKD   +AG  +P     S E + +G
Sbjct:    5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNN-YKTPHRGKDALKKAGQ-LPVSFACSAEVYDQG 424          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA)

HSP 1 Score: 292 bits (748), Expect = 9.970e-91
Identity = 174/416 (41.83%), Postives = 242/416 (58.17%), Query Frame = 1
Query:  118 FTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYA-TRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISE 1359
             T + K+ +++HLL  S  G+L  GA  EAA  F    KTISRLWK      + G     +   +    G K   ++E+  K+    + +R++ R +A  LG+   T+ R +    LR H++A+KP+LTD  KL  L+W L  ++    A T A ++  + VH+DEK FYL K   ++YL   E  P R  +SKRFITKVM + AV RPH  P   + FDGK+ ++ FTE VP  RNS+NR  GT+ TK +  VT+   +  LI  +IPAI  KWP +   + IYIQQDNAKP       +  EA +S GF IQLI QPPNS DTNILDLGFF +IQSL+D+     +D+L+  V  A+    P  L KV+ +LQ+ + +IL + GG N YK+PH+ KD+  R G  +P  L + E
Sbjct:   10 LTTNMKNNIVQHLLKNSQGGVLRKGAVCEAAEAFAVNRKTISRLWKAATEMMENGEPAHMVGKVKGYKRGEK-KKVDEV--KVRSLSVLERSSYRVMAPKLGVSKTTICRWVKDKQLRPHTSAIKPHLTDLNKLARLKWCLSQLQPNIIARTVAFNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSA-SKEIYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNN-YKIPHMNKDRLERIGA-LPNVLEVEE 419          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA)

HSP 1 Score: 293 bits (749), Expect = 3.130e-90
Identity = 173/429 (40.33%), Postives = 246/429 (57.34%), Query Frame = 1
Query:   88 SAAQAPKRKNFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGV-VTPNLNSGRKGNSGRKGHNL--EELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 1362
            S   A   KN +  ++  V++HLL   +   IL HGA+   AA FG    T+  +WKR  +     +    +++S  KG+ GR   NL  E +  +L   P   RTT R +A AL +P  TL           +S++++P LTD  K+  ++W L  V A         D  D+VHVDEK F+     + +YL  GE PP R  +SK+FITKVM ++AVARP  + A    FDGK+  W FT +VP  R SRNR AGT+VT  V VT+  YKA L++ VIPAIK KWP+ T  + I IQQDNA+P       D++ AC+S G+ +++  QPPNS D NILDLGFF +IQSLQ +  +R ID ++S  E AW   + A L   + +LQ C+++++ + GG N YK+PH+ K   A  G  +P+ +P+  +
Sbjct:   18 SIKSAMGAKNLSNSDRTAVLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGR---NLKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRM-GGNNNYKIPHMKKAALAARGM-LPQVVPVESD 440          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 290 bits (743), Expect = 4.030e-90
Identity = 171/433 (39.49%), Postives = 253/433 (58.43%), Query Frame = 1
Query:   70 DVSAAGSAAQAPKRKNFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVH-DFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCV-EVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 1362
            D+  + S+A    +K  T  ++ ++   LL  S  G L  G   E A  F    K++ R+WKR     + GV   +++    G  GRK  + +    K+++ PL  RT++R LA+A+ +P  TL R +    +R H+ A+KP+LT++GK   LR+    +     A   V  +  ++VH+DEK F+L +E +++YL   E  P+R  +SKRFITKVM +AAVARP  +   N  F GKI ++ FT + P  R+S+N  AGT+ TK +  VTK+  ++ LI+ V+PAI+ KWP      TI+IQQDNAKP       + ++A    GFDI+L  QPPNS D N+LDL +F SIQSLQ +    TID+L++ VE ++    P  L +++ SLQACM +I+ + GG N YK PHLGK+K  R+G  +P  L    E
Sbjct:    2 DIPMSHSSAHPISQKKLTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENGVAV-DVSRRLHGRVGRKRIHFDV--NKVSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPHYDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGG-NHYKQPHLGKNKLMRSGN-LPTHLSCDRE 429          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W4HB86_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB86_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.410e-88
Identity = 175/419 (41.77%), Postives = 248/419 (59.19%), Query Frame = 1
Query:  103 PKRKNFTRDEKDEVIRHLLAGSSNGI---LGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLN----SGRKGNSGRK-GHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDL---LEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAG 1326
            P+R+N T DE++ ++R +L  S+      L  G  +E A  + C   TI R+     + +Q G+   N+     S  KG  GRK     E+++ KL   PL  RTT+R ++E  GI L +L R L     R+HSNA+KP LTD  K   ++  +  V +    T  ++D   FVH+DEK FY+ K  +K+YL  GE  P R+ +SK++ITKVM + AVARP +N A +S +DGKI +W F E V   R+S NR AGT+ TK + VTKD Y+  L++ V+PAI  KWP A    TI +Q DNA+     +   L   L+   + G+ + L  QPPNS DTN+LDLGFFA+IQSLQ R  ARTID+L+  VE+A+     A+L   + +LQ+C+ + L L G +N YK+PH+ K+K  R G
Sbjct:    3 PERRNLTDDEREAILREVLLRSNGSYITRLPKGFSQELADKYKCHVSTIRRV---LAVAKQQGIGGGNMKVTVASKMKGRVGRKKAFTAEQVKAKLLQVPLAQRTTLRSISERTGISLGSLHRYLKLGLFRSHSNAIKPLLTDANKYGRMKHAVEFVGS----TLELNDMLQFVHLDEKWFYITKVSRKYYLVPGEKEPKRECKSKQYITKVMFLCAVARPRYNHATDSWWDGKIGIWPFVEPVAAQRDSVNRKAGTLETKSITVTKDVYRTFLLDKVLPAIVAKWPRAD--HTIKLQHDNARAHVTPEDAKLKAALDTYKAVGWYMSLAPQPPNSPDTNVLDLGFFAAIQSLQHRKSARTIDELVGHVESAFVEYPLARLNHTFMTLQSCLVETLKLFG-DNAYKVPHMSKEKEERKG 411          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.210e-87
Identity = 169/430 (39.30%), Postives = 244/430 (56.74%), Query Frame = 1
Query:  112 KNFTRDEKDEVIRHLLAGSSNGI--LGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAG------VVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 1377
            K+ T D++  V+ HLL     G   L  GA ++ A  FG    TI+ +WKR  +    G      +V  +++S +KG  GRK     +L E++   P   RTT+  +A A+GIP+ TL        L  +++ +KP LTD  K   ++W +  V          HD  D+VHVDEK F   +   +FYL  GE PP R  QSKRFITKVM + AVARP  + A +  +DGKI  W FTE VP  R+SRNR AGT+  + + VT+  YK  LI+ VIPAIK KWPA +  R++ IQQDNA+P        ++ AC+S G+ + L  QPPNS D N+LDLGFF +IQSLQ    + T  +++     AW   DP  L + + +LQ C+ ++++   G+N+YK+PH+ K+   ++G  +P  +  SE+ +  G
Sbjct:   17 KDLTSDQRRAVVDHLLLRIVKGPCKLQRGAIQDVARMFGRNRHTIADIWKRANVSLGNGDLPARELVCEDVSSQKKGRVGRK-LKYNDLPERIRAVPAAQRTTLSYVAHAIGIPVSTLKDYYKRGTLVKYNSHVKPKLTDVNKTARVKWAMDFVHP---TELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRTTQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAES-SRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIM-AAGDNSYKVPHMKKEALKKSGK-LPESVMCSEDVFETG 439          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 285 bits (729), Expect = 7.640e-87
Identity = 178/433 (41.11%), Postives = 241/433 (55.66%), Query Frame = 1
Query:   88 SAAQAPKRKNFTRDEKDEVIRHLLAG--SSNG---ILGHGAYKEAAATFGCCWKTISRLWKRYK-----LQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPIS 1356
            ++ Q  K +  + +E+  V+  LL    SS+G   +L  GA K AA  F    KTISR+WKRYK     +   AG V     S R+   GRK  +LE+L   +   P+ DR  +R L+   GIP  +L R +    +R H+   KP LT   KL+ + W+L  +   G       D+  ++H+DEK FYL +  Q  YL  GE  P    +SK  +TKVM + A ARP  +    + FDGKI +W F  + P  R+S NR  GT+VTK   V  + YK  L+E V+PAI EKWP  +    I+IQ+DNAKP +    E++  A +S G++I +  QPPNS D N+LDLGFF SIQSLQ + R++ ID LI+ VE A+       L  V+ SLQACME  L +  G+N YKLPH+GK    R GT     LPIS
Sbjct:   95 ASPQTKKLRLLSNNERSAVVHFLLQNLRSSHGEDKVLARGAQKAAAVVFQTSPKTISRIWKRYKETCDPINCPAGNV-----SNRRNRCGRKQMHLEDLDALVRRVPMKDRGDLRTLSAVTGIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNG----RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGV-DGDNNYKLPHMGKASLMREGT-----LPIS 512          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485KBU5_9STRA5.490e-10243.12Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
W4FAY9_9STRA2.820e-9440.56Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6P6TEQ3_COFAR1.330e-9340.38uncharacterized protein LOC113700698 n=2 Tax=Coffe... [more]
W2NW41_PHYPR1.100e-9241.71HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
UPI001C256EBA9.970e-9141.83uncharacterized protein LOC121779336 n=3 Tax=Salvi... [more]
A0A6A4Z2B2_9STRA3.130e-9040.33Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A834HDF7_RHOSS4.030e-9039.49Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
W4HB86_9STRA1.410e-8841.77Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6A4Z322_9STRA1.210e-8739.30Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A448ZNT1_9STRA7.640e-8741.11Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:399677..401101 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog157072.XP_008870373.1
Model size1425
Max annot lvl157072.XP_008870373.1|-
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.28e-54
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size711
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791497.5285838-UTR-P-littoralis_Contig72:399676..4003901680791497.5285838-UTR-P-littoralis_Contig72:399676..400390Pylaiella littoralis U1_48UTRP-littoralis_Contig72 399677..400390 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791497.5438056-CDS-P-littoralis_Contig72:400390..4011011680791497.5438056-CDS-P-littoralis_Contig72:400390..401101Pylaiella littoralis U1_48CDSP-littoralis_Contig72 400391..401101 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.81.1prot_P-littoralis_Contig72.81.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig72 400391..401101 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig72.81.1

>prot_P-littoralis_Contig72.81.1 ID=prot_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKC
VEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHED
LLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQL
ISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKA
ARAGTPIPRRLPISEEAWIKGTAAAGQQGAAAGGHGA
back to top

mRNA from alignment at P-littoralis_Contig72:399677..401101+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig72.81.1 ID=mRNA_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1425bp|location=Sequence derived from alignment at P-littoralis_Contig72:399677..401101+ (Pylaiella littoralis U1_48)
CCAGAAGTCACTCGAAATCACCACCCCAACTTTGAAGCTCCGGTCAACAG CCTTCCCGGCTGCTGGTAAGACGTGTCCGCTGCTGGGAGCGCGGCCCAGG CGCCGAAACGCAAGAATTTCACGCGTGATGAAAAAGATGAGGTGATTCGG CACCTCCTCGCCGGCAGCAGCAACGGCATCCTGGGACATGGTGCGTACAA AGAAGCCGCGGCTACGTTCGGGTGCTGTTGGAAGACGATATCGAGGTTGT GGAAAAGGTACAAACTGCAGCGTCAAGCAGGGGTTGTCACTCCAAATCTG AATTCCGGTCGCAAAGGGAATTCCGGCCGGAAGGGTCACAACCTTGAAGA ACTGCGTGAGAAGCTCGCTGACACCCCCCTGAACGACCGCACCACCATGC GCCGCTTGGCTGAGGCGCTCGGGATTCCCCTACGTACACTAGCCCGCAAC CTCAACGCGCTTGGATTGAGGGCACACTCGAACGCGCTCAAGCCTTATCT CACTGACGATGGGAAGCTTGAAAGCCTGAGGTGGGTGTTGCGGTAGGTGC GGGCAGGCGGCTACGCTACCAGAGCGGTGCACGACTTTGACGACTTCGTT CATGTGGATGAGAAATGATTCTATCTTTTCAAGGAGGGCCAGAAGTTCTA CTTGTACGATGGCGAGATCCCCCCGATTCGCAAGGTCCAAAGCAAGAGAT TCATAACGAAGGTTATGTGTGTCGCTGCTGTTGCACGCCCGCACCACAAC CCCGCCATCAACAGCCACTTCGATGGTAAGATCAGACTGTGGGCTTTCAC GGAGGAGGTTCCTGATATGCGCAACAGCCGGAACCGTGCTGCTGGGACGG TTGTAACGAAGTGTGTGGAGGTTACGAAGGACACCTACAAGGCGAAGCTG ATCGAAGGGGTGATCCCCGCAATCAAGGAGAAATGGCCGGCGGCGACTCG GCATCGCACCATCTACATCCAGCAGGACAACGCCAAGCCCCGCCGTGTCA ACGACCACGAGGACCTCCTGGAAGCGTGCTCCTCGGGTGGATTTGACATT CAACTCATCAACCAGCCGCCCAACAGCTCCGACACCAACATCTTGGACCT GGGTTTCTTCGCGTCAATTCAGTCCCTGCAGGACCGCACTCGAGCCAGGA CTATCGACCAGCTCATCAGCGAGGTCGAGGCCGCATGGGCGGCGGCGGAC CCGGCGAAGCTTGGCAAGGTGTGGACTTCGCTCCAGGCTTGCATGGAGCA GATCCTCCTGCTTTGCGGCGGAGAGAACACGTACAAGCTGCCTCACTTGG GCAAAGACAAGGCTGCACGGGCTGGAACACCCATCCCCCGGCGTTTGCCG ATATCCGAAGAGGCGTGGATCAAGGGGACGGCGGCAGCGGGACAGCAAGG GGCGGCTGCAGGGGGGCATGGGGCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig72:399677..401101+

>mRNA_P-littoralis_Contig72.81.1 ID=mRNA_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig72:399677..401101+ (Pylaiella littoralis U1_48)
ATGTGTGTCGCTGCTGTTGCACGCCCGCACCACAACCCCGCCATCAACAG
CCACTTCGATGGTAAGATCAGACTGTGGGCTTTCACGGAGGAGGTTCCTG
ATATGCGCAACAGCCGGAACCGTGCTGCTGGGACGGTTGTAACGAAGTGT
GTGGAGGTTACGAAGGACACCTACAAGGCGAAGCTGATCGAAGGGGTGAT
CCCCGCAATCAAGGAGAAATGGCCGGCGGCGACTCGGCATCGCACCATCT
ACATCCAGCAGGACAACGCCAAGCCCCGCCGTGTCAACGACCACGAGGAC
CTCCTGGAAGCGTGCTCCTCGGGTGGATTTGACATTCAACTCATCAACCA
GCCGCCCAACAGCTCCGACACCAACATCTTGGACCTGGGTTTCTTCGCGT
CAATTCAGTCCCTGCAGGACCGCACTCGAGCCAGGACTATCGACCAGCTC
ATCAGCGAGGTCGAGGCCGCATGGGCGGCGGCGGACCCGGCGAAGCTTGG
CAAGGTGTGGACTTCGCTCCAGGCTTGCATGGAGCAGATCCTCCTGCTTT
GCGGCGGAGAGAACACGTACAAGCTGCCTCACTTGGGCAAAGACAAGGCT
GCACGGGCTGGAACACCCATCCCCCGGCGTTTGCCGATATCCGAAGAGGC
GTGGATCAAGGGGACGGCGGCAGCGGGACAGCAAGGGGCGGCTGCAGGGG
GGCATGGGGCG
back to top