mRNA_P-littoralis_Contig72.81.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 322 bits (826), Expect = 5.490e-102 Identity = 185/429 (43.12%), Postives = 251/429 (58.51%), Query Frame = 1
Query: 115 NFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKGTAAAGQQ 1398
N T+ E+ +V LL S +G L HG++K A F C W TISR+WKR ++ + ++ S K SGRK +L +++A P DRTT++R+A + +P +L R L HS+ LKP LTD K L+W + V D +VH+DEK FY+ + + YL GE PP R QSKRFITKVM ++AVARP N + FDGKI W FTE VP RNSRNR +GT+VT V V++DTY+ L+ VIPAIK KWP A R I IQQDNA+P + +L AC + G+DI + QPPNS D N+LDLGFF +IQSLQ+RTR RTID+LI+ +AW + D + L + +LQ+CM + + GG N YK+PH+ K + G +P + + + G A G +
Sbjct: 7 NLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRK-KKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFVGP----DLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIR-SGGNNNYKVPHMKKAPMMKQGR-LPDAIECPRDVFDHGLALMGNE 427
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA) HSP 1 Score: 301 bits (770), Expect = 2.820e-94 Identity = 174/429 (40.56%), Postives = 247/429 (57.58%), Query Frame = 1
Query: 109 RKNFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKGTAAAG 1392
+ NFT ++ +V HLL + +G L +G+++ AA F C W+T++RLWKR + + ++ S +KG +GRK +L E++A P DRTT++ +A + +P TL L HS+++KP LT+ K L+W R G VHD D+VHVDEK FY+ + + YL GE PP R +SKRFITKVM ++AVARP N N FDG+I W FT+ VP R+SRNR + T+VT VT+DTY+ LI+ VIPAIK KWP R I +QQDNA+P E + AC+S G+ I+++ QPPNS D N +LQ+RTR +TID+LI +AW D L + +LQ C+ +++ GG N YK+PH+GK K A+ G +P + + + G AA G
Sbjct: 8 KPNFTPQQRTDVCHHLLTLVARDGKLPYGSFRNVAAQFACNWQTVARLWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFE--RLG--PDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAAR-ILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMN-----------TLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVR-AGGGNNYKIPHMGKKKLAKQGL-LPESVECPRDVFNFGHAAIG 417
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR) HSP 1 Score: 302 bits (773), Expect = 1.330e-93 Identity = 172/426 (40.38%), Postives = 248/426 (58.22%), Query Frame = 1
Query: 55 PGCW*DVSAAGSAAQAPKRKNFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHD-FDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCV-EVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAG 1326
PG + ++A+ + Q K+KNFT K + LL NG L G A F +++SR+W K A PNL+ GRK ++ E + D P RT +R LA+AL + +L R + LR HSN +KPYL+ D K L++ L + G A++ D D +H+DEK FY+ K Q++YL+ E P R +SKRF+ K+M +AAVARP ++ +N F+GKI +W F + P RNS+NR AGT+ TK + +TKD ++ LIE ++PAI+EKWP ++ + I+IQQDNAKP + ++ +EA GFDI+L QP NS D N+LDLGFF +I SLQ + TID+ +S VE A+ L KV+ +LQ CM +++ +CGG N YK+PH+ K+K R G
Sbjct: 77 PGSY--IAASENTRQPMKKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRK--KIQVNLEDIKDIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLASKFSFDNMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKWPCSS-SKMIFIQQDNAKPHLGINDDEFVEAAKIDGFDIRLCCQPANSPDMNVLDLGFFRAIDSLQHQKAPSTIDEFVSAVEKAFDMFPSEDLNKVFLTLQLCMVEVIKICGGNN-YKIPHMNKEKYVRNG 496
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 297 bits (761), Expect = 1.100e-92 Identity = 176/422 (41.71%), Postives = 243/422 (57.58%), Query Frame = 1
Query: 115 NFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 1377
N T ++ ++ LL S NG + G A A + TISRLW+ +K + NL SG GN GRK + +ELR ++ PL+ R T++ LA ALG+ + R L R HS+ +KP LT++ +L +++ L D D VH+DEK F + + +YL E P+R+ QSKRFI+K M +AAVARP ++ FDGKI +WAF EE R S+NR GT+V + VE V ++ YKA I +IPAIK KWP + + RTIYIQQDNAKP D D++ A SGG+DI++ QPPNS D N+LDLG+F SIQSLQ +T R ++ L+ V +A++A L K++ +LQ CME I+ GG N YK PH GKD +AG +P S E + +G
Sbjct: 5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNN-YKTPHRGKDALKKAGQ-LPVSFACSAEVYDQG 424
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA) HSP 1 Score: 292 bits (748), Expect = 9.970e-91 Identity = 174/416 (41.83%), Postives = 242/416 (58.17%), Query Frame = 1
Query: 118 FTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYA-TRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISE 1359
T + K+ +++HLL S G+L GA EAA F KTISRLWK + G + + G K ++E+ K+ + +R++ R +A LG+ T+ R + LR H++A+KP+LTD KL L+W L ++ A T A ++ + VH+DEK FYL K ++YL E P R +SKRFITKVM + AV RPH P + FDGK+ ++ FTE VP RNS+NR GT+ TK + VT+ + LI +IPAI KWP + + IYIQQDNAKP + EA +S GF IQLI QPPNS DTNILDLGFF +IQSL+D+ +D+L+ V A+ P L KV+ +LQ+ + +IL + GG N YK+PH+ KD+ R G +P L + E
Sbjct: 10 LTTNMKNNIVQHLLKNSQGGVLRKGAVCEAAEAFAVNRKTISRLWKAATEMMENGEPAHMVGKVKGYKRGEK-KKVDEV--KVRSLSVLERSSYRVMAPKLGVSKTTICRWVKDKQLRPHTSAIKPHLTDLNKLARLKWCLSQLQPNIIARTVAFNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSA-SKEIYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNN-YKIPHMNKDRLERIGA-LPNVLEVEE 419
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA) HSP 1 Score: 293 bits (749), Expect = 3.130e-90 Identity = 173/429 (40.33%), Postives = 246/429 (57.34%), Query Frame = 1
Query: 88 SAAQAPKRKNFTRDEKDEVIRHLLA-GSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGV-VTPNLNSGRKGNSGRKGHNL--EELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 1362
S A KN + ++ V++HLL + IL HGA+ AA FG T+ +WKR + + +++S KG+ GR NL E + +L P RTT R +A AL +P TL +S++++P LTD K+ ++W L V A D D+VHVDEK F+ + +YL GE PP R +SK+FITKVM ++AVARP + A FDGK+ W FT +VP R SRNR AGT+VT V VT+ YKA L++ VIPAIK KWP+ T + I IQQDNA+P D++ AC+S G+ +++ QPPNS D NILDLGFF +IQSLQ + +R ID ++S E AW + A L + +LQ C+++++ + GG N YK+PH+ K A G +P+ +P+ +
Sbjct: 18 SIKSAMGAKNLSNSDRTAVLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGR---NLKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRM-GGNNNYKIPHMKKAALAARGM-LPQVVPVESD 440
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS) HSP 1 Score: 290 bits (743), Expect = 4.030e-90 Identity = 171/433 (39.49%), Postives = 253/433 (58.43%), Query Frame = 1
Query: 70 DVSAAGSAAQAPKRKNFTRDEKDEVIRHLLAGSSNGILGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVH-DFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCV-EVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 1362
D+ + S+A +K T ++ ++ LL S G L G E A F K++ R+WKR + GV +++ G GRK + + K+++ PL RT++R LA+A+ +P TL R + +R H+ A+KP+LT++GK LR+ + A V + ++VH+DEK F+L +E +++YL E P+R +SKRFITKVM +AAVARP + N F GKI ++ FT + P R+S+N AGT+ TK + VTK+ ++ LI+ V+PAI+ KWP TI+IQQDNAKP + ++A GFDI+L QPPNS D N+LDL +F SIQSLQ + TID+L++ VE ++ P L +++ SLQACM +I+ + GG N YK PHLGK+K R+G +P L E
Sbjct: 2 DIPMSHSSAHPISQKKLTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENGVAV-DVSRRLHGRVGRKRIHFDV--NKVSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPHYDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGG-NHYKQPHLGKNKLMRSGN-LPTHLSCDRE 429
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W4HB86_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB86_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.410e-88 Identity = 175/419 (41.77%), Postives = 248/419 (59.19%), Query Frame = 1
Query: 103 PKRKNFTRDEKDEVIRHLLAGSSNGI---LGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAGVVTPNLN----SGRKGNSGRK-GHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDL---LEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAG 1326
P+R+N T DE++ ++R +L S+ L G +E A + C TI R+ + +Q G+ N+ S KG GRK E+++ KL PL RTT+R ++E GI L +L R L R+HSNA+KP LTD K ++ + V + T ++D FVH+DEK FY+ K +K+YL GE P R+ +SK++ITKVM + AVARP +N A +S +DGKI +W F E V R+S NR AGT+ TK + VTKD Y+ L++ V+PAI KWP A TI +Q DNA+ + L L+ + G+ + L QPPNS DTN+LDLGFFA+IQSLQ R ARTID+L+ VE+A+ A+L + +LQ+C+ + L L G +N YK+PH+ K+K R G
Sbjct: 3 PERRNLTDDEREAILREVLLRSNGSYITRLPKGFSQELADKYKCHVSTIRRV---LAVAKQQGIGGGNMKVTVASKMKGRVGRKKAFTAEQVKAKLLQVPLAQRTTLRSISERTGISLGSLHRYLKLGLFRSHSNAIKPLLTDANKYGRMKHAVEFVGS----TLELNDMLQFVHLDEKWFYITKVSRKYYLVPGEKEPKRECKSKQYITKVMFLCAVARPRYNHATDSWWDGKIGIWPFVEPVAAQRDSVNRKAGTLETKSITVTKDVYRTFLLDKVLPAIVAKWPRAD--HTIKLQHDNARAHVTPEDAKLKAALDTYKAVGWYMSLAPQPPNSPDTNVLDLGFFAAIQSLQHRKSARTIDELVGHVESAFVEYPLARLNHTFMTLQSCLVETLKLFG-DNAYKVPHMSKEKEERKG 411
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 285 bits (730), Expect = 1.210e-87 Identity = 169/430 (39.30%), Postives = 244/430 (56.74%), Query Frame = 1
Query: 112 KNFTRDEKDEVIRHLLAGSSNGI--LGHGAYKEAAATFGCCWKTISRLWKRYKLQRQAG------VVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 1377
K+ T D++ V+ HLL G L GA ++ A FG TI+ +WKR + G +V +++S +KG GRK +L E++ P RTT+ +A A+GIP+ TL L +++ +KP LTD K ++W + V HD D+VHVDEK F + +FYL GE PP R QSKRFITKVM + AVARP + A + +DGKI W FTE VP R+SRNR AGT+ + + VT+ YK LI+ VIPAIK KWPA + R++ IQQDNA+P ++ AC+S G+ + L QPPNS D N+LDLGFF +IQSLQ + T +++ AW DP L + + +LQ C+ ++++ G+N+YK+PH+ K+ ++G +P + SE+ + G
Sbjct: 17 KDLTSDQRRAVVDHLLLRIVKGPCKLQRGAIQDVARMFGRNRHTIADIWKRANVSLGNGDLPARELVCEDVSSQKKGRVGRK-LKYNDLPERIRAVPAAQRTTLSYVAHAIGIPVSTLKDYYKRGTLVKYNSHVKPKLTDVNKTARVKWAMDFVHP---TELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRTTQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAES-SRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIM-AAGDNSYKVPHMKKEALKKSGK-LPESVMCSEDVFETG 439
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 285 bits (729), Expect = 7.640e-87 Identity = 178/433 (41.11%), Postives = 241/433 (55.66%), Query Frame = 1
Query: 88 SAAQAPKRKNFTRDEKDEVIRHLLAG--SSNG---ILGHGAYKEAAATFGCCWKTISRLWKRYK-----LQRQAGVVTPNLNSGRKGNSGRKGHNLEELREKLADTPLNDRTTMRRLAEALGIPLRTLARNLNALGLRAHSNALKPYLTDDGKLESLRWVLR*VRAGGYATRAVHDFDDFVHVDEK*FYLFKEGQKFYLYDGEIPPIRKVQSKRFITKVMCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPIS 1356
++ Q K + + +E+ V+ LL SS+G +L GA K AA F KTISR+WKRYK + AG V S R+ GRK +LE+L + P+ DR +R L+ GIP +L R + +R H+ KP LT KL+ + W+L + G D+ ++H+DEK FYL + Q YL GE P +SK +TKVM + A ARP + + FDGKI +W F + P R+S NR GT+VTK V + YK L+E V+PAI EKWP + I+IQ+DNAKP + E++ A +S G++I + QPPNS D N+LDLGFF SIQSLQ + R++ ID LI+ VE A+ L V+ SLQACME L + G+N YKLPH+GK R GT LPIS
Sbjct: 95 ASPQTKKLRLLSNNERSAVVHFLLQNLRSSHGEDKVLARGAQKAAAVVFQTSPKTISRIWKRYKETCDPINCPAGNV-----SNRRNRCGRKQMHLEDLDALVRRVPMKDRGDLRTLSAVTGIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNG----RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGV-DGDNNYKLPHMGKASLMREGT-----LPIS 512 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig72.81.1 >prot_P-littoralis_Contig72.81.1 ID=prot_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCback to top mRNA from alignment at P-littoralis_Contig72:399677..401101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig72.81.1 ID=mRNA_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1425bp|location=Sequence derived from alignment at P-littoralis_Contig72:399677..401101+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig72:399677..401101+ >mRNA_P-littoralis_Contig72.81.1 ID=mRNA_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig72:399677..401101+ (Pylaiella littoralis U1_48)back to top |