mRNA_P-littoralis_Contig716.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 558 bits (1439), Expect = 7.410e-195 Identity = 314/437 (71.85%), Postives = 332/437 (75.97%), Query Frame = 2
Query: 122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTT-----PQGTKTTKAFAESGQ-------KVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPI------GL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEK 1357
M RRKVDEEQVRKACAAIDDGMSVRKAA VFGVGRTSI DRR GK AMNAKVGPETILSKEEEDSLE ILLF+ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF RRH RVAE STRI+E N ITE+EEPRMVQFYERWAALLDEVKPEANHVH T + P+ + +A KVVGSMRSNSRENTTVVATISADGHTW PTII KG + GL E A+ +QG + + + F + S+EVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVLASFY NSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERRDERPPLQDVPIAA NEQLEK
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGL--EGAKYTCTDYSFMQGD---LFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATKKERRDERPPLQDVPIAALNEQLEK 432
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 1.290e-192 Identity = 315/452 (69.69%), Postives = 335/452 (74.12%), Query Frame = 2
Query: 185 MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGH----DFRPIGL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
MSVRKAA FGVGRTSI DRR GKVAMNAKVGPETILS EEEDSLEDILLF+ARN+LAVDRV LRDAVRRLCNDGRRI WDP++GPGKDWLAGF RRHPRVAE STRIYE NR+TE+EEPRMVQF+ERWAALLDEVKP ANHVH T + G R + N VVA ISAD HT PTII KG D+ E AR +QG + + + F + S+EV +LAMNLKII FQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGG LPLKRDMPGVIADAWK SF PEINKSSFAGAGLWPVNK+RALG+LKGTA KKERRDERPPLQDVPIAA NEQLE DIGERALRVL+GQGHTVTGIR GTVLL GLLTQRK AK MATSRGSLGLP
Sbjct: 1 MSVRKAAEDFGVGRTSIEDRRRGKVAMNAKVGPETILSNEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNT----------------------DETAGCSREPAATN--VVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGD---VFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLP 425
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 2.190e-190 Identity = 317/473 (67.02%), Postives = 336/473 (71.04%), Query Frame = 2
Query: 122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRV---GTVLLGGLLTQRKRAKMATSRGSLG 1498
M RRKVDEEQVRKACAAIDDGMSVRKAA VFGVGRTSI DRR GKVAMNAKVG ETILSKEEEDSLEDILLF+ARN+LAV RV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF RRHPRVAE STRIYE NRITE+EEPRMVQFYERWAALLDE KPEANHVH T +G TTPQGTKTTKAFAESGQKVVGSMR+NSRENTTVVATISADGHTW PTII KG + E AR +QG + + + F + S+EVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKS INKS FAGA LWPVNK+RALGRLKGTAKKKERRDER PLQD+PIAA NEQ EKDIG RALRVLRGQGHTVTGIR T L G + ++R + R G
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETG--TTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGD---VFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKS-------------------------------------INKSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTGIRTRRRATRRLRGQKSAKRRGQKKRPRSCCG 431
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 2.070e-173 Identity = 277/475 (58.32%), Postives = 340/475 (71.58%), Query Frame = 2
Query: 122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RIST-----RSSATEGCSTENP--------TYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
M RR+VD +Q +KAC A+ GMSVRKAA V+ + R S+ R G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGF RHPRV E +TRIYE NR+T+E EPR+V+FY +WAALL+++KPEA+HVH T +G TTPQG KT KA+ ++GQKVV S+R+NSRENTT+V TISADG TW PTII KG +P + G P +F I + G P S+EVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y SGGLLP KRD+PGVIA AW A+FT E N+SSFAGAGLWPVN +RA+ RL+GTAK+ E + RPPL+DVPIA NEQLE+DIGER +R L+ GH TG+RV TV+LG ++ QRKRAK MATSRGSLGLP
Sbjct: 1 MGRRRVDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG--TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP-----DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLP 467
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 502 bits (1292), Expect = 2.950e-171 Identity = 308/476 (64.71%), Postives = 327/476 (68.70%), Query Frame = 2
Query: 122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRV-AECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTT-VVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTP-VRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
M RRKVDEEQVRKACAAIDDGMSVR A VFGVGRTSI RR GKVAMNAKVGPETILSKEEEDSLEDILLF+ARN+LAVDRV L + C+D + G RV + R V W + + S + S TPQGTKTTKAFAESGQKVVGSMRSNSRENTT VV TISADGHTW PTII KGH + E AR +QG + L+ + F + + +EV RLAMNLKIIL QLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERR ERPPLQDV +AA NEQLEKDIGERALRV RGQGHTVTGIRVGTVLLGGLLTQRKRAK MATSRGSLGLP
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRTATEVFGVGRTSIEARRRGKVAMNAKVGPETILSKEEEDSLEDILLFAARNFLAVDRVQLSEM---RCDDSATT------------VGGSLGIQRRVRGKIGLRASFVGTYG-------------WRSARPASTRQTGSPRTRSLAWCSNTPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFG----ERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTANKKERRAERPPLQDVTMAALNEQLEKDIGERALRVPRGQGHTVTGIRVGTVLLGGLLTQRKRAKKMATSRGSLGLP 444
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 507 bits (1306), Expect = 2.540e-168 Identity = 274/470 (58.30%), Postives = 336/470 (71.49%), Query Frame = 2
Query: 137 VDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RIST-----RSSATEGCSTENP--------TYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
VD +Q +KAC A+ GMSVRKAA V+ + R S+ R G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGF RHPRV E +TRIYE NR+T+E EPR+V+FY +WAALL+++KPEA+HVH T +G TTPQG KT KA+ ++GQKVV S+R+NSRENTT+V TISADG TW PTII KG +P + G P +F I + G P S+EVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y SGGLLP KRD+PGVIA AW A+FT E N+SSFAGAGLWPVN +RA+ RL+GTAK+ E + RPPL+DVPIA NEQLE+DIGER +R L+ GH TG+RV TV+LG ++ QRKRAK MATSRGSLGLP
Sbjct: 247 VDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG--TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP-----DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLP 708
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 7.660e-164 Identity = 282/447 (63.09%), Postives = 304/447 (68.01%), Query Frame = 2
Query: 185 MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARRVQG----TPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL------------------------------------------------LPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEK 1357
MSVRKAA VFGVGRTSI DR GKVAMNAKVGPETILSKEE+ L+DILLF+ARN+LAVDR+ L DAVR+LC+DGRRIPWDPEK PGKDWLAGF RRHPRVAE STRIYE NRITE+EEP MVQFYERWAAL T S+ TT +T +AFAESGQKVVGSMRSNSRENTTVVATISADGHTW PTII KG + E AR T + + + F + S+EVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVL+SFYHNSGGL LPL+RDMPGVIADAWK SFTPEIN+SSFAGAGLWPVNK++ALGRLKGTAKKKERRDERPPLQDVPI A NEQLEK
Sbjct: 1 MSVRKAAEVFGVGRTSIEDRCPGKVAMNAKVGPETILSKEEDSLLKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAAL------------STRSNRRPTTCT-IRTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLERDMPGVIADAWKLSFTPEINQSSFAGAGLWPVNKEQALGRLKGTAKKKERRDERPPLQDVPITALNEQLEK 434
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 450 bits (1158), Expect = 1.070e-153 Identity = 252/348 (72.41%), Postives = 268/348 (77.01%), Query Frame = 2
Query: 122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGH----DFRPIGL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL 1132
M RRKVDEE+VRKA AAID+GMSVRKAA VFGVGRTSI DRR GKVAMNAKVGPETILS+EEEDSLEDILL +ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWL GF RRHPRVAE STRIYE NRITE+EEPRMVQFYERWAAL DEVKP+ANHVH T +G TTPQGTKTTKAFAESGQKVVGSMRSNSREN TVVATISADGHTW PTI K D+ E AR +QG + + + F + S+EVIRLAMNLKI+LFQLPSHTSHITQPLDVVAFGRFKKSV VLASFYH SGGL
Sbjct: 1 MTRRKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETG--TTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGD---VFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLPSHTSHITQPLDVVAFGRFKKSVPSVLASFYHISGGL 343
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KN20_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN20_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 2.050e-152 Identity = 277/474 (58.44%), Postives = 299/474 (63.08%), Query Frame = 2
Query: 2 LSFEHHSVARRAFHPEIQPREPPQLPLLATLVVSLGFLLSMIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGP-GKDWL-AGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRP---IGL*SEAARRVQGTPVRILR-----SCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRG 1393
LSFEHHSVAR+AFHPEIQPREPPQLPLL T VSL FLLS+ RRKVDEEQ+RK CAAIDDGM V KAA VFGVGRTSI DRR G AMN KV ETILS EEEDSLEDILLF+ARN+LAV RV L+D VRRLCNDGRRIPWDPEK GK L A F H W + + S + STTPQGTKTTKAFAESGQKVVG+MRSNSRENTTVVATIS DGHTW PTII KG + + R T ++ + + F + S++V RLAMNL+IILFQLPSHTSHITQPL+VVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMP VIADA +KKKERRDERPPLQDVPIAA NEQLEKDIGERALRV G
Sbjct: 41 LSFEHHSVARQAFHPEIQPREPPQLPLLVTFAVSLEFLLSITRRKVDEEQLRKVCAAIDDGMLVGKAAEVFGVGRTSIEDRRRGLAAMNPKVDTETILSNEEEDSLEDILLFAARNFLAVHRVHLKDGVRRLCNDGRRIPWDPEKRVRGKIGLRASFVGTHG-----------------------------WRSARPASTRQIGSPKTRSLAWCSTTPQGTKTTKAFAESGQKVVGAMRSNSRENTTVVATISVDGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVQVFRLAMNLRIILFQLPSHTSHITQPLNVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPSVIADA----------------------------------SKKKERRDERPPLQDVPIAALNEQLEKDIGERALRVSEG 451
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 387 bits (995), Expect = 7.730e-127 Identity = 221/480 (46.04%), Postives = 295/480 (61.46%), Query Frame = 2
Query: 110 FLLSMIRRKVDEEQVRKACAAIDDG-MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTEN-------------PTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQR-KRAKMATSRGSLGLP 1504
LLSM R +V E KAC A+ G MS AAA +G+ +TS++ R G+ A++A+VGP T+++ EED+LED+LL++ RN++ + L + VR+LCNDGR IPW P+KGPG+ WL GF RH R++ RIYE NR+T E+ R+ +FY+ W +DE +P A+HV T SG T QGT+ + AE GQ VV MRS SREN T+V TI+A G PTII KG F + + G P +F I + + N +++VI+LA++L I L QLPSH SHITQPLDV FG FKK + +V+ +F +GG LP KRDM G+I AW +SFTPEINK+SFAGAGLWPV+++RAL RL K+K +RPPL+DVPIA NE+LE+ IG+R +R LR +GHT+TG+RV TV+LG L + KR K R +LG P
Sbjct: 11 LLLSMGRNRVCAEAATKACEAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGG--TVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFN-----GDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLL-RPKRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPNKNKRPKGPPKRANLGRP 482 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig716.11.1 >prot_P-littoralis_Contig716.11.1 ID=prot_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=234bp MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAback to top mRNA from alignment at P-littoralis_Contig716:57612..59829- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig716.11.1 ID=mRNA_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2218bp|location=Sequence derived from alignment at P-littoralis_Contig716:57612..59829- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig716:57612..59829- >mRNA_P-littoralis_Contig716.11.1 ID=mRNA_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=702bp|location=Sequence derived from alignment at P-littoralis_Contig716:57612..59829- (Pylaiella littoralis U1_48)back to top |