mRNA_P-littoralis_Contig716.11.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig716.11.1
Unique NamemRNA_P-littoralis_Contig716.11.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 558 bits (1439), Expect = 7.410e-195
Identity = 314/437 (71.85%), Postives = 332/437 (75.97%), Query Frame = 2
Query:  122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTT-----PQGTKTTKAFAESGQ-------KVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPI------GL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEK 1357
            M RRKVDEEQVRKACAAIDDGMSVRKAA VFGVGRTSI DRR GK AMNAKVGPETILSKEEEDSLE ILLF+ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF RRH RVAE STRI+E N ITE+EEPRMVQFYERWAALLDEVKPEANHVH T  +          P+  +  +A             KVVGSMRSNSRENTTVVATISADGHTW PTII KG   +        GL  E A+        +QG    +  +  + F                   +      S+EVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVLASFY NSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERRDERPPLQDVPIAA NEQLEK
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGL--EGAKYTCTDYSFMQGD---LFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATKKERRDERPPLQDVPIAALNEQLEK 432          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.290e-192
Identity = 315/452 (69.69%), Postives = 335/452 (74.12%), Query Frame = 2
Query:  185 MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGH----DFRPIGL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
            MSVRKAA  FGVGRTSI DRR GKVAMNAKVGPETILS EEEDSLEDILLF+ARN+LAVDRV LRDAVRRLCNDGRRI WDP++GPGKDWLAGF RRHPRVAE STRIYE NR+TE+EEPRMVQF+ERWAALLDEVKP ANHVH T                       +  G  R  +  N  VVA ISAD HT  PTII KG     D+       E AR        +QG    +  +  + F                   +      S+EV +LAMNLKII FQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGG LPLKRDMPGVIADAWK SF PEINKSSFAGAGLWPVNK+RALG+LKGTA KKERRDERPPLQDVPIAA NEQLE DIGERALRVL+GQGHTVTGIR GTVLL GLLTQRK AK MATSRGSLGLP
Sbjct:    1 MSVRKAAEDFGVGRTSIEDRRRGKVAMNAKVGPETILSNEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNT----------------------DETAGCSREPAATN--VVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGD---VFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLP 425          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 2.190e-190
Identity = 317/473 (67.02%), Postives = 336/473 (71.04%), Query Frame = 2
Query:  122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRV---GTVLLGGLLTQRKRAKMATSRGSLG 1498
            M RRKVDEEQVRKACAAIDDGMSVRKAA VFGVGRTSI DRR GKVAMNAKVG ETILSKEEEDSLEDILLF+ARN+LAV RV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF RRHPRVAE STRIYE NRITE+EEPRMVQFYERWAALLDE KPEANHVH T  +G  TTPQGTKTTKAFAESGQKVVGSMR+NSRENTTVVATISADGHTW PTII KG   +          E AR        +QG    +  +  + F                   +      S+EVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKS                                     INKS FAGA LWPVNK+RALGRLKGTAKKKERRDER PLQD+PIAA NEQ EKDIG RALRVLRGQGHTVTGIR     T  L G  + ++R +    R   G
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETG--TTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGD---VFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKS-------------------------------------INKSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTGIRTRRRATRRLRGQKSAKRRGQKKRPRSCCG 431          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 512 bits (1319), Expect = 2.070e-173
Identity = 277/475 (58.32%), Postives = 340/475 (71.58%), Query Frame = 2
Query:  122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RIST-----RSSATEGCSTENP--------TYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
            M RR+VD +Q +KAC A+  GMSVRKAA V+ + R S+  R  G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGF  RHPRV E +TRIYE NR+T+E EPR+V+FY +WAALL+++KPEA+HVH T  +G  TTPQG KT KA+ ++GQKVV S+R+NSRENTT+V TISADG TW PTII KG   +P     +      G P         +F      I       +     G     P            S+EVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y  SGGLLP KRD+PGVIA AW A+FT E N+SSFAGAGLWPVN +RA+ RL+GTAK+ E +  RPPL+DVPIA  NEQLE+DIGER +R L+  GH  TG+RV TV+LG ++ QRKRAK MATSRGSLGLP
Sbjct:    1 MGRRRVDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG--TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP-----DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLP 467          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE)

HSP 1 Score: 502 bits (1292), Expect = 2.950e-171
Identity = 308/476 (64.71%), Postives = 327/476 (68.70%), Query Frame = 2
Query:  122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRV-AECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTT-VVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTP-VRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
            M RRKVDEEQVRKACAAIDDGMSVR A  VFGVGRTSI  RR GKVAMNAKVGPETILSKEEEDSLEDILLF+ARN+LAVDRV L +     C+D                + G      RV  +   R   V                 W +       +       S +  S TPQGTKTTKAFAESGQKVVGSMRSNSRENTT VV TISADGHTW PTII KGH  +          E AR        +QG   +  L+   + F                   +  +    +EV RLAMNLKIIL QLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERR ERPPLQDV +AA NEQLEKDIGERALRV RGQGHTVTGIRVGTVLLGGLLTQRKRAK MATSRGSLGLP
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRTATEVFGVGRTSIEARRRGKVAMNAKVGPETILSKEEEDSLEDILLFAARNFLAVDRVQLSEM---RCDDSATT------------VGGSLGIQRRVRGKIGLRASFVGTYG-------------WRSARPASTRQTGSPRTRSLAWCSNTPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFG----ERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTANKKERRAERPPLQDVTMAALNEQLEKDIGERALRVPRGQGHTVTGIRVGTVLLGGLLTQRKRAKKMATSRGSLGLP 444          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 2.540e-168
Identity = 274/470 (58.30%), Postives = 336/470 (71.49%), Query Frame = 2
Query:  137 VDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RIST-----RSSATEGCSTENP--------TYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLP 1504
            VD +Q +KAC A+  GMSVRKAA V+ + R S+  R  G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGF  RHPRV E +TRIYE NR+T+E EPR+V+FY +WAALL+++KPEA+HVH T  +G  TTPQG KT KA+ ++GQKVV S+R+NSRENTT+V TISADG TW PTII KG   +P     +      G P         +F      I       +     G     P            S+EVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y  SGGLLP KRD+PGVIA AW A+FT E N+SSFAGAGLWPVN +RA+ RL+GTAK+ E +  RPPL+DVPIA  NEQLE+DIGER +R L+  GH  TG+RV TV+LG ++ QRKRAK MATSRGSLGLP
Sbjct:  247 VDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG--TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP-----DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLP 708          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 7.660e-164
Identity = 282/447 (63.09%), Postives = 304/447 (68.01%), Query Frame = 2
Query:  185 MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARRVQG----TPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL------------------------------------------------LPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEK 1357
            MSVRKAA VFGVGRTSI DR  GKVAMNAKVGPETILSKEE+  L+DILLF+ARN+LAVDR+ L DAVR+LC+DGRRIPWDPEK PGKDWLAGF RRHPRVAE STRIYE NRITE+EEP MVQFYERWAAL             T S+   TT    +T +AFAESGQKVVGSMRSNSRENTTVVATISADGHTW PTII KG   +          E AR        T   +  +  + F                   +      S+EVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVL+SFYHNSGGL                                                LPL+RDMPGVIADAWK SFTPEIN+SSFAGAGLWPVNK++ALGRLKGTAKKKERRDERPPLQDVPI A NEQLEK
Sbjct:    1 MSVRKAAEVFGVGRTSIEDRCPGKVAMNAKVGPETILSKEEDSLLKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAAL------------STRSNRRPTTCT-IRTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLERDMPGVIADAWKLSFTPEINQSSFAGAGLWPVNKEQALGRLKGTAKKKERRDERPPLQDVPITALNEQLEK 434          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 1.070e-153
Identity = 252/348 (72.41%), Postives = 268/348 (77.01%), Query Frame = 2
Query:  122 MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGH----DFRPIGL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL 1132
            M RRKVDEE+VRKA AAID+GMSVRKAA VFGVGRTSI DRR GKVAMNAKVGPETILS+EEEDSLEDILL +ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWL GF RRHPRVAE STRIYE NRITE+EEPRMVQFYERWAAL DEVKP+ANHVH T  +G  TTPQGTKTTKAFAESGQKVVGSMRSNSREN TVVATISADGHTW PTI  K      D+       E AR        +QG    +  +  + F                   +      S+EVIRLAMNLKI+LFQLPSHTSHITQPLDVVAFGRFKKSV  VLASFYH SGGL
Sbjct:    1 MTRRKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETG--TTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGD---VFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLPSHTSHITQPLDVVAFGRFKKSVPSVLASFYHISGGL 343          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5KN20_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN20_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 2.050e-152
Identity = 277/474 (58.44%), Postives = 299/474 (63.08%), Query Frame = 2
Query:    2 LSFEHHSVARRAFHPEIQPREPPQLPLLATLVVSLGFLLSMIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGP-GKDWL-AGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRP---IGL*SEAARRVQGTPVRILR-----SCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRG 1393
            LSFEHHSVAR+AFHPEIQPREPPQLPLL T  VSL FLLS+ RRKVDEEQ+RK CAAIDDGM V KAA VFGVGRTSI DRR G  AMN KV  ETILS EEEDSLEDILLF+ARN+LAV RV L+D VRRLCNDGRRIPWDPEK   GK  L A F   H                              W +       +       S +  STTPQGTKTTKAFAESGQKVVG+MRSNSRENTTVVATIS DGHTW PTII KG   +    +        R   T    ++     +  + F                   +      S++V RLAMNL+IILFQLPSHTSHITQPL+VVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMP VIADA                                  +KKKERRDERPPLQDVPIAA NEQLEKDIGERALRV  G
Sbjct:   41 LSFEHHSVARQAFHPEIQPREPPQLPLLVTFAVSLEFLLSITRRKVDEEQLRKVCAAIDDGMLVGKAAEVFGVGRTSIEDRRRGLAAMNPKVDTETILSNEEEDSLEDILLFAARNFLAVHRVHLKDGVRRLCNDGRRIPWDPEKRVRGKIGLRASFVGTHG-----------------------------WRSARPASTRQIGSPKTRSLAWCSTTPQGTKTTKAFAESGQKVVGAMRSNSRENTTVVATISVDGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVQVFRLAMNLRIILFQLPSHTSHITQPLNVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPSVIADA----------------------------------SKKKERRDERPPLQDVPIAALNEQLEKDIGERALRVSEG 451          
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 7.730e-127
Identity = 221/480 (46.04%), Postives = 295/480 (61.46%), Query Frame = 2
Query:  110 FLLSMIRRKVDEEQVRKACAAIDDG-MSVRKAAAVFGVGRTSIADRRHGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERWAALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTEN-------------PTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQR-KRAKMATSRGSLGLP 1504
             LLSM R +V  E   KAC A+  G MS   AAA +G+ +TS++ R  G+ A++A+VGP T+++  EED+LED+LL++ RN++ +    L + VR+LCNDGR IPW P+KGPG+ WL GF  RH R++    RIYE NR+T  E+ R+ +FY+ W   +DE +P A+HV  T  SG   T QGT+  +  AE GQ VV  MRS SREN T+V TI+A G    PTII KG  F       +    + G P         +F      I    +  +     N                  +++VI+LA++L I L QLPSH SHITQPLDV  FG FKK + +V+ +F   +GG LP KRDM G+I  AW +SFTPEINK+SFAGAGLWPV+++RAL RL    K+K    +RPPL+DVPIA  NE+LE+ IG+R +R LR +GHT+TG+RV TV+LG  L  + KR K    R +LG P
Sbjct:   11 LLLSMGRNRVCAEAATKACEAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGG--TVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFN-----GDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLL-RPKRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPNKNKRPKGPPKRANLGRP 482          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRA3_9PHAE7.410e-19571.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2E0_9PHAE1.290e-19269.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFM5_9PHAE2.190e-19067.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV04_9PHAE2.070e-17358.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYS0_9PHAE2.950e-17164.71DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JJ12_9PHAE2.540e-16858.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNQ5_9PHAE7.660e-16463.09DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KJ62_9PHAE1.070e-15372.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN20_9PHAE2.050e-15258.44DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JYX7_9PHAE7.730e-12746.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig716contigP-littoralis_Contig716:57612..59829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6500.XP_005105750.1
PFAMsDDE_1,HTH_Tnp_Tc5,HTH_psq
Model size1504
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.85e-12
EggNOG OGs2CXPE@1|root,2RYUX@2759|Eukaryota,39MS3@33154|Opisthokonta,3CPBT@33208|Metazoa,3E5GP@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size702
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791490.4551468-UTR-P-littoralis_Contig716:57611..582921680791490.4551468-UTR-P-littoralis_Contig716:57611..58292Pylaiella littoralis U1_48UTRP-littoralis_Contig716 57612..58292 -
1680791490.5107274-UTR-P-littoralis_Contig716:59708..598291680791490.5107274-UTR-P-littoralis_Contig716:59708..59829Pylaiella littoralis U1_48UTRP-littoralis_Contig716 59709..59829 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791490.4683979-CDS-P-littoralis_Contig716:58292..584771680791490.4683979-CDS-P-littoralis_Contig716:58292..58477Pylaiella littoralis U1_48CDSP-littoralis_Contig716 58293..58477 -
1680791490.4843616-CDS-P-littoralis_Contig716:59158..591721680791490.4843616-CDS-P-littoralis_Contig716:59158..59172Pylaiella littoralis U1_48CDSP-littoralis_Contig716 59159..59172 -
1680791490.4982846-CDS-P-littoralis_Contig716:59205..597081680791490.4982846-CDS-P-littoralis_Contig716:59205..59708Pylaiella littoralis U1_48CDSP-littoralis_Contig716 59206..59708 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig716.11.1prot_P-littoralis_Contig716.11.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig716 58293..59708 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig716.11.1

>prot_P-littoralis_Contig716.11.1 ID=prot_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=234bp
MIRRKVDEEQVRKACAAIDDGMSVRKAAAVFGVGRTSIADRRHGKVAMNA
KVGPETILSKEEEDSLEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIP
WDPEKGPGKDWLAGFFRRHPRVAECSTRIYEVNRITEEEEPRMVQFYERW
AALLDEVKPEANHVHETSSSGSSTTPQGTKTTKAFAESGQKVVGSMRSNS
RENTTVVATISADGHTWPPTIILKGHDFRPIGL*
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mRNA from alignment at P-littoralis_Contig716:57612..59829-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig716.11.1 ID=mRNA_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2218bp|location=Sequence derived from alignment at P-littoralis_Contig716:57612..59829- (Pylaiella littoralis U1_48)
GCTCTCGTTTGAGCACCACAGCGTGGCACGCCGAGCATTCCACCCCGAGA TACAGCCGAGGGAACCCCCACAGCTCCCGCTGCTAGCCACCTTAGTCGTG TCCTTGGGATTCTTGCTAAGCATGATCCGGCGCAAGGTGGACGAGGAGCA GGTTCGGAAGGCCTGTGCAGCGATAGATGATGGCATGTCGGTTAGGAAGG CTGCTGCGGTCTTCGGGGTAGGTCGTACGTCCATCGCAGACCGCCGCCAT GGCAAGGTGGCCATGAACGCGAAGGTTGGTCCCGAGACCATCCTGAGCAA AGAAGAGGAGGATTCGCTGGAAGATATTCTGCTGTTTTCTGCTCGCAACT ACTTGGCTGTGGATCGGGTTCCCCTCAGAGATGCGGTGCGACGACTCTGC AACGACGGTCGGCGGATTCCTTGGGATCCAGAGAAGGGTCCGGGGAAAGA TTGGCTTGCGGGCTTCTTTCGTAGGCACCCACGGGTGGCGGAGTGCTCGA CCCGCATCTACGAGGTAAACAGGATCACCGAAGAAGAGGAGCCTCGCATG GTGCAGTTCTACGAGAGATGGGCAGCTCTCCTCGACGAAGTCAAACCGGA GGCCAACCACGTGCACGAGACTAGGTCTAGACTACCGGTAGTCTAGAGTA GATACAGCAGTAGTGGCAGCAGTAGAAACTGCGCGGGTGACTGCTGTGCA AAGACCACGAAACATGTCCCACGAAAAATATCAGGCAGAGTTCTGCCCCC TTGCGGCGTTATTTTGGCCTCCTCATGTAGTCTACAGAGGCCGTGCTCCC GCATTCCTGCTCAAAAATGCCGAAATTGCCGCTGACTCTGGTCTAAAGTA GGCTACAGCAGTAGTTCCAGACACAAAAGTAGAGTACATCACTGGTTCCA GACAATGTACTGCTGTAGACTATGGTACTCTAAAATACAATAATTTCAGA GCTGCATCGCATCGTCTTCAGCTGGTAGTTCGAGGGAACCTGCGGCGACG AACGTGTAACTTAGTCTAGTCTAGGGGAGCGATGTTGAGTAGATGCATGT GCCAACACATTGAAGAATCTAGGCTAGTCTACAGCACGCTGCTTTTGCTC TCCCGGTTGCCTCGTCCAGCTACCGCCACAATGACGGTAGACTACGTAGG TTGAAAGCCCTCGCCGCACAAAAATAAATGAAAAAGAGCCACCGCGTGTC CCTCCCCCGTCCACCCCCGTTGCTTGGCGCGCACGATATTGACTGTAAAT GTTTGGCTGCGTGCGTACACTACTGCTGGTAATTTTGACTATCCATTAGC CTACCCTTAACGCCCCCCCCCCCCGACCCTCACATACGCGTTCCCGTTGC AGGTACCACTCCGCAAGGAACCAAGACGACGAAGGCTTTTGCGGAATCAG GGCAGAAGGTGGTTGGTTCGATGCGCTCCAACTCGCGAGAGAACACCACC GTGGTCGCTACCATCAGCGCTGATGGTCACACCTGGCCACCAACCATTAT CTTAAAGGGCCACGACTTCAGGCCGATTGGTTTGTAGAGCGAAGCGGCCC GGAGGGTGCAAGGTACACCTGTACGGATTCTTCGTTCATGCAGGGAGACG TTTTCATCACCTACTTGAAGGATTTCCACAAGAAGCTCGGCGACCGAGGG TTGCTCGACGGAAAACCCCACATACTCTTGCTCGATGGAGGTAATCAGGC TGGCCATGAATCTCAAAATCATCTTGTTCCAGCTACCCTCCCACACGTCG CACATCACCCAGCCCTTGGATGTCGTCGCCTTCGGACGCTTTAAGAAATC GGTGACCAGAGTCTTGGCGTCCTTCTACCACAACTCCGGCGGGTTGTTGC CGCTGAAACGTGACATGCCCGGCGTGATCGCGGATGCTTGGAAAGCGAGC TTTACACCGGAGATAAACAAATCATCATTCGCTGGGGCGGGCTTGTGGCC TGTGAACAAGGACCGGGCGCTGGGCCGGCTGAAGGGCACAGCGAAGAAGA AAGAGCGGCGAGACGAGCGCCCACCCCTACAGGATGTCCCCATCGCCGCC CCCAACGAGCAGCTGGAAAAAGACATCGGAGAAAGGGCCCTCAGGGTGCT GAGGGGGCAAGGGCACACCGTCACGGGAATCCGAGTAGGCACGGTGTTAC TCGGTGGCCTCTTGACTCAAAGGAAGCGCGCGAAGATGGCGACCTCGCGG GGCTCGCTTGGCCTTCCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig716:57612..59829-

>mRNA_P-littoralis_Contig716.11.1 ID=mRNA_P-littoralis_Contig716.11.1|Name=mRNA_P-littoralis_Contig716.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=702bp|location=Sequence derived from alignment at P-littoralis_Contig716:57612..59829- (Pylaiella littoralis U1_48)
ATGATCCGGCGCAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGC
GATAGATGATGGCATGTCGGTTAGGAAGGCTGCTGCGGTCTTCGGGGTAG
GTCGTACGTCCATCGCAGACCGCCGCCATGGCAAGGTGGCCATGAACGCG
AAGGTTGGTCCCGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGA
AGATATTCTGCTGTTTTCTGCTCGCAACTACTTGGCTGTGGATCGGGTTC
CCCTCAGAGATGCGGTGCGACGACTCTGCAACGACGGTCGGCGGATTCCT
TGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCTTTCG
TAGGCACCCACGGGTGGCGGAGTGCTCGACCCGCATCTACGAGGTAAACA
GGATCACCGAAGAAGAGGAGCCTCGCATGGTGCAGTTCTACGAGAGATGG
GCAGCTCTCCTCGACGAAGTCAAACCGGAGGCCAACCACGTGCACGAGAC
TAGCAGTAGTGGCAGCAGTACCACTCCGCAAGGAACCAAGACGACGAAGG
CTTTTGCGGAATCAGGGCAGAAGGTGGTTGGTTCGATGCGCTCCAACTCG
CGAGAGAACACCACCGTGGTCGCTACCATCAGCGCTGATGGTCACACCTG
GCCACCAACCATTATCTTAAAGGGCCACGACTTCAGGCCGATTGGTTTGT
AG
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