mRNA_P-littoralis_Contig71.7.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A6M1YN17_9BACT (HNHc domain-containing protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1YN17_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 2.800e-13 Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 1
Query: 166 LNDKCINPCHLEIVPRSLDDVWERILKHTRRENDCLLWTGCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTSMVGERCHLAKISEEKAAQIK 573
LN +N C R DDV+E K+T+++ +CL+WTG T+KGY + + K SAHR + + GEPIP +G V C C+N HL + S N +D G G R AK SE+ I+
Sbjct: 49 LNSGNVNSCGCSKKYRDFDDVFE---KNTKKQGECLIWTGTTSKGYPKFKLQGKVYSAHRVVWE-QVFGEPIP---EGKC--VCHHCDNRACVNVGHLFVASRAQNSKDMIRKGRQAKGSRNGSAKFSEKDIISIR 175
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A6M3KWD7_9ZZZZ (Putative homing endonuclease n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6M3KWD7_9ZZZZ) HSP 1 Score: 71.6 bits (174), Expect = 2.460e-12 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 229 WERILKHTRRENDCLLWTGCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHG 507
W+R+ + NDC LW G T++GYG T S +S HR ++ K IP + A VR CG LC+NP+HLDIG+ N +D A G
Sbjct: 26 WKRV--DIKTPNDCWLWKGPTDRGYGVTCDGSNRISTHRMAW--KLINGDIPKFVKTRKALVRHKCGNRLCVNPNHLDIGNYSDNGKDAAREG 114
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A4R8ER33_9ENTR (HNH endonuclease n=1 Tax=Buttiauxella sp. BIGb0552 TaxID=2485120 RepID=A0A4R8ER33_9ENTR) HSP 1 Score: 69.7 bits (169), Expect = 1.090e-11 Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 1
Query: 205 VPRSLDDVWERILKHTRRENDCLLWT-GCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTSMVGERCHLAKISEEKAAQIKISK 582
+P + +R+L + +C +W + GYGQ + K + A+RASY++ KGE DGM +R C LCINP+HL +GS N QD GER K+SE IK SK
Sbjct: 7 LPSKRKSLKDRLLAGCVKTGECWVWNKSVASSGYGQIRLNYKNLRANRASYMV-FKGEIA----DGMV--IRHTCDNKLCINPEHLILGSCKQNSQDMVERDRQAKGERNGRCKLSESDVQAIKDSK 126
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A8F5A6F1_9CAUD (HNH endonuclease n=1 Tax=Salmonella phage vB_SalP_ABTNLsp11242 TaxID=2838911 RepID=A0A8F5A6F1_9CAUD) HSP 1 Score: 66.2 bits (160), Expect = 2.200e-10 Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 232 ERILKHTRRENDCLLWT-GCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTSMVGERCHLAKISEEKAAQIKIS 579
ER+L + C +W + GYGQ + K + A+RAS+++ KGE IP DGM +R C LCINPDHL +GS N +D + G + K+SE+ +IK S
Sbjct: 16 ERLLAGCIKTEGCWIWRRSVASSGYGQIRLNYKNLRANRASFMV-FKGE-IP---DGMV--IRHTCDNKLCINPDHLILGSCKQNSEDMVSRDRQAKGIKNGRCKLSEDTVREIKKS 125
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A3Y1IV74_SALET (HNH endonuclease n=28 Tax=root TaxID=1 RepID=A0A3Y1IV74_SALET) HSP 1 Score: 63.5 bits (153), Expect = 4.090e-9 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 262 NDCLLWTGCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQD 492
++C++W GC GYG T +T +AHR Y I KG + +I+GM +R C LCINPDHL +G+ N D
Sbjct: 2 SECIIWKGCVKNGYGWRTWRRQTTTAHRIEYCI-AKGIAL-ADIEGMI--IRHQCDNPLCINPDHLVVGTQQQNVND 74
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A142WWL9_9PLAN (HNHc domain-containing protein n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WWL9_9PLAN) HSP 1 Score: 62.0 bits (149), Expect = 8.530e-9 Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = 1
Query: 220 DDVWERIL-KHTRRENDCLLWTGCTN-KGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTS 513
D V +R+ K E C LW G GYG + + M+ H+ +Y++ P VR +CG SLCINPDHL +G+ N D AHGT+
Sbjct: 14 DGVLDRLTQKSMAAEGGCRLWLGAQRGTGYGAMKISGRVMAVHQVAYVLAHGAIP-------RGRVVRHLCGCSLCINPDHLALGTDRDNALDAVAHGTA 106
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A7C1R2C2_9BACT (HNHc domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A7C1R2C2_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.140e-8 Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 1
Query: 235 RILKHTRRE-NDCLLWTGCTNK-GYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGT------------------------SMVGERCHLAKISEEKAAQIK 573
RIL + E N C +W C + YG+T +SKT++AHRASY I KGE IP +G+ QV C LC+NPDHL +G+ N +D G + GE HLAK++E+ +I+
Sbjct: 105 RILDGCKEEKNGCWIWQKCRGRQSYGKTGWFSKTVTAHRASY-IAFKGE-IP---EGL--QVCHKCDVRLCVNPDHLWLGTQKDNMEDAKTKGRLKGTPGIKWTDQQRENILKNRQPPNKKGEAHHLAKLNEKNVREIR 236
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: UPI00046F608A (HNH endonuclease n=1 Tax=Paenibacillus ehimensis TaxID=79264 RepID=UPI00046F608A) HSP 1 Score: 61.2 bits (147), Expect = 1.440e-8 Identity = 42/115 (36.52%), Postives = 56/115 (48.70%), Query Frame = 1
Query: 232 ERILKHTRRENDCLLWTGCTN-KGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTSMVGERCHLAKISEEKAAQIK 573
+R + + C +W G N KGYGQ V AHR SY + KG IP GM V C LC+NPDHL +G+ N D VGER +K+++EK +I+
Sbjct: 5 DRFTSNVDKSGACWVWKGSINGKGYGQLNVNGINEMAHRYSYQMH-KGT-IP---KGMF--VMHSCDNRLCVNPDHLIVGTHRDNMDDMINKKRQAVGERVKSSKLTKEKVKEIR 112
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: A0A352V7A0_9SPIR (HNH endonuclease n=1 Tax=Spirochaetia bacterium TaxID=2053615 RepID=A0A352V7A0_9SPIR) HSP 1 Score: 61.6 bits (148), Expect = 1.460e-8 Identity = 45/132 (34.09%), Postives = 63/132 (47.73%), Query Frame = 1
Query: 199 EIVPRSLDDVWERILKHTRRE----NDCLLWTGCTNKGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGT---SMVGERCHLAKISEEKAAQIK 573
E P +++ ERI +H + E C WT T+KGYG + K AHR ++I T GE DG+ V C LCINPDHL +G+ + N D G GE+ AK+++ + IK
Sbjct: 3 EFTPEWIEEARERIREHFQYEINKNTGCWEWTKSTSKGYGHLGIRGKFYQAHRLMWII-TNGEIK----DGLF--VCHKCDNRLCINPDHLFLGTNLDNINDAIEKGKWQHQPKGEKNGNAKLTKNQVLNIK 127
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Match: UPI0009EF3A81 (HNH endonuclease n=2 Tax=Pseudomonas TaxID=286 RepID=UPI0009EF3A81) HSP 1 Score: 59.7 bits (143), Expect = 7.030e-8 Identity = 41/120 (34.17%), Postives = 59/120 (49.17%), Query Frame = 1
Query: 229 WERILKHTRRENDCLLWTGCTN-KGYGQTTVYSKTMSAHRASYLIKTKGEPIPCEIDGMTAQVRRMCGKSLCINPDHLDIGSIVSNPQDKAAHGTS----MVGERCHLAKISEEKAAQIK 573
WE++ R E C W T +GYGQ V + AHR S+ I PIP GM VR C SLC+ PDHL++G+ N +D + G + GE AK++ + ++I+
Sbjct: 9 WEKV--PNRPEEGCWEWGASTKPEGYGQMNVNGRPAFAHRVSFEIANG--PIPA---GML--VRHKCDNSLCVRPDHLELGTQTDNMRDMISRGRARHPGQPGELNPAAKLTNAEVSEIR 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig71.7.1 >prot_P-littoralis_Contig71.7.1 ID=prot_P-littoralis_Contig71.7.1|Name=mRNA_P-littoralis_Contig71.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp EGSCHIWTGRTEGKSDKPVMSRMVNGQSLQKHVQRYVWNLTHPDISKRRTback to top mRNA from alignment at P-littoralis_Contig71:31998..32579+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig71.7.1 ID=mRNA_P-littoralis_Contig71.7.1|Name=mRNA_P-littoralis_Contig71.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig71:31998..32579+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig71:31998..32579+ >mRNA_P-littoralis_Contig71.7.1 ID=mRNA_P-littoralis_Contig71.7.1|Name=mRNA_P-littoralis_Contig71.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig71:31998..32579+ (Pylaiella littoralis U1_48)back to top |