mRNA_P-littoralis_Contig708.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.510e-66 Identity = 112/175 (64.00%), Postives = 137/175 (78.29%), Query Frame = 2
Query: 239 EKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERRLRKRSHDVTTFLKGVNDEARFGS 763
EKDELT GMFS LN EFR EVERYA SAR K E+V DD D +N +PR S F ++W+FPLLYEW+CH FAPIHQQLVES FS +DTCT+ DSREIDIVRLGQF S+ SR++QR +A+N EIRQAG KAI VAREL K+A+ A+P ER+LRKR+HD FL+ +++++ GS
Sbjct: 90 EKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDD-DAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGS 263
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 216 bits (551), Expect = 2.090e-66 Identity = 113/174 (64.94%), Postives = 136/174 (78.16%), Query Frame = 2
Query: 239 EKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERRLRKRSHDVTTFLKGVNDEARFG 760
EKD+LT GM++ LN+ EFR+EVE YAASA K EVV+DD D DNP PR S+F ++W FPLLYEW+ H F A IH+QLV SVFSKYDTCT+ DSREIDIVRLGQF SAQSR+I++ HASN EIR+AG KAI AR L KAAS AVP ER+ RKR HDVT F++ ++A++G
Sbjct: 83 EKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYG 256
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 197 bits (502), Expect = 7.660e-55 Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 2
Query: 239 EKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERRLRKRSHDVTTFLKGVNDEARFGS 763
EKDELT GMFS LN EFR EVERY+ SAR K E+V DD D ++ +PR S F ++W+FPLLYEW+ H FAPIHQQLV+SV S YDTCT+ DSREI IVRLGQF S+QSR++QR HA+N EIR+AG K I VAREL K+A+ A+P + +LRKR D FL+ +++++ GS
Sbjct: 586 EKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDD-DAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGS 759
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 186 bits (472), Expect = 7.170e-53 Identity = 102/174 (58.62%), Postives = 127/174 (72.99%), Query Frame = 2
Query: 245 DELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERRLRKRSHDVTTFLKGVNDEARFGSE 766
++LTLGMFS L EFR+E+ERYAASA K +VV+D D +N +PR S F ++WTFP LYEW+CH FFAPIHQQLVES S YDT T+ DSRE+DIVRLGQFSS SR+++R +SN EIR G KAI VA L K+AS AVP ER+LR HD FLK +++++ GS+
Sbjct: 223 NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSD-VDVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSK 395
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 118 bits (295), Expect = 6.850e-27 Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 2
Query: 236 REKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERRLRKR 706
R KDELT G+FS ++ + R E+E+YA S G EV D +P+ +S L+ FPLLY+ CH F+F PIHQQL+E+ FSK+D+C + D E+DIVR+G + SA+SR I A A+ +IR AG K ++ ARE + P E RKR
Sbjct: 312 RRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV-------DQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 112 bits (280), Expect = 6.240e-25 Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 2
Query: 236 REKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARE 652
R KDELTLG+FS ++ + R E+E+YA S G E+ D +P+ +S L+ PLLY CH F+F PIHQQL+E+ FSKYD+C K D E+D+VR+G + SA+SR I A + +IR AG K +K A E
Sbjct: 313 RRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEI-------DESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATE 445
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 8.310e-18 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 2
Query: 236 REKDELTLGMFSTLNDETEFRQEVERYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQF 559
R KDELT G+FS + ++ E R EVE YA S G EV D++ + L FP LY++ C F+F PIHQQL+E+ FSKYDTC K D +D VR+G +
Sbjct: 263 RRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEV-----DEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSW 365
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 8.840e-10 Identity = 36/72 (50.00%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 4 RHQHLPLSMARLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDL 219
RHQ LPLSMAR+GC SFY A E AVG EFARA L V WP Y+ R + E ++R L DL
Sbjct: 162 RHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEP--RTEREREYRTQLVKDL 231
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 2.510e-9 Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 DRHQHLPLSMARLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREIL 207
+RHQ LPLSMAR+GC SFY +E A E AVG +FARA L V WP Y R + E +FR L
Sbjct: 149 ERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEP--RTEREREFRTQL 215
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 4.850e-5 Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 1 DRHQHLPLSMARLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQ 156
+RHQ LPLSMAR+ C SFY ++ A E G EFARA L V WP Y+
Sbjct: 195 ERHQQLPLSMARIACPSFYARTGIMADGAVE---GPEFARAFLHVAWPGLYE 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig708.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig708.4.1 >prot_P-littoralis_Contig708.4.1 ID=prot_P-littoralis_Contig708.4.1|Name=mRNA_P-littoralis_Contig708.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp MKNMISVKSLQTTLQRHQRREKDELTLGMFSTLNDETEFRQEVERYAASAback to top mRNA from alignment at P-littoralis_Contig708:21474..22242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig708.4.1 ID=mRNA_P-littoralis_Contig708.4.1|Name=mRNA_P-littoralis_Contig708.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=769bp|location=Sequence derived from alignment at P-littoralis_Contig708:21474..22242+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig708:21474..22242+ >mRNA_P-littoralis_Contig708.4.1 ID=mRNA_P-littoralis_Contig708.4.1|Name=mRNA_P-littoralis_Contig708.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig708:21474..22242+ (Pylaiella littoralis U1_48)back to top |