mRNA_P-littoralis_Contig707.37.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig707.37.1
Unique NamemRNA_P-littoralis_Contig707.37.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: D8LST5_ECTSI (DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.230e-61
Identity = 114/162 (70.37%), Postives = 126/162 (77.78%), Query Frame = 3 
Query:   36 MKCSLLFALALRAQCGNAFVGPIGGLALSNCVSAAVGAQNGIVRRGVASTPQARAAAASSADSEVSVVVRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKEMRRHPRT 521
            MKCSLL ALA RAQ G  FVGP GGL LSNCVS A  + N IVRRGVAST  +  AAAS   S+ SV +RK AV+E +AER +L K QAEAALAAFTD+VM  VADG KI+LQGFGTFEGRARKGRTGRNPRTGEEL IKA T PAFSA+KAFK+M +   T
Sbjct:    1 MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVAST--SLKAAASDEGSDASVNLRKPAVVEAIAERSNLDKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVKAAHT 160
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A7S1Y344_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y344_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.730e-22
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            VRK A++E +AER   +K ++  A+ A  D +M  VADGKK+NLQGFGTF+   RK RTGRNP+TGE L IKA   P+FSAAK FKE
Sbjct:   66 VRKPALVEMVAERMGTSKSESTQAIEAVVDTIMEVVADGKKLNLQGFGTFKLSERKARTGRNPKTGESLEIKASKTPSFSAAKGFKE 152
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A835Z9S8_9STRA (DNA-binding protein HU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.990e-21
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKEMRRHPR 518
            ++K   +  ++ +  L+K Q +AA++AF D VM  VADGKK++L GFGTFE R R  R GRNP+TGE L+I A   PAFSAAKAFK+  +  R
Sbjct:    1 MKKADFVASISAKSGLSKTQTDAAISAFMDTVMEAVADGKKVSLVGFGTFESRERAARQGRNPQTGEALSIPASKAPAFSAAKAFKDRVKEAR 93
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A151ALX2_9CLOT (DNA-binding protein HU n=2 Tax=Clostridium TaxID=1485 RepID=A0A151ALX2_9CLOT)

HSP 1 Score: 90.9 bits (224), Expect = 1.490e-20
Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKEM 503
            + K+ +I  MAE+G LTK  AEAAL AF + V   ++ G+K+ L GFGTFE R R  R GRNPRT EE+TI A TVP F A K FK+M
Sbjct:    1 MNKSELIASMAEKGQLTKKDAEAALKAFIESVEETLSKGEKVQLVGFGTFEVRERAERKGRNPRTKEEITIPASTVPVFKAGKEFKDM 88
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: UPI000B59B412 (HU family DNA-binding protein n=1 Tax=Leptolyngbya ohadii TaxID=1962290 RepID=UPI000B59B412)

HSP 1 Score: 90.5 bits (223), Expect = 2.110e-20
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            + K  +++ +AE+ D+ K  AEA L A  + +M +VADG+K+ L GFGTFE R R+ R GRNP+TGE +TI A TVPAFSA K FK+
Sbjct:    1 MNKGELVDKIAEKADIPKKTAEAVLTAAIESIMESVADGEKVTLVGFGTFEPRQRQEREGRNPKTGETMTIPASTVPAFSAGKVFKD 87
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: UPI001684A996 (HU family DNA-binding protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684A996)

HSP 1 Score: 90.5 bits (223), Expect = 2.110e-20
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            + K  +I+ +AE+ ++TK +A+A ++AFT+ V+  VA+G+K+ L GFGTFE RAR  R GRNP+TGE + I A TVP FSA K FKE
Sbjct:    1 MNKAELIDKVAEKANVTKKEADALISAFTESVVEAVAEGQKVTLVGFGTFEPRARAEREGRNPKTGEAMKIPASTVPVFSAGKLFKE 87
[Close]
BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: UPI00199DAA8D (HU family DNA-binding protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=UPI00199DAA8D)

HSP 1 Score: 90.1 bits (222), Expect = 2.980e-20
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            + K  +++ +AE+  +TK +AEA L A T+ +M  VA G+K+ L GFGTFE R R+ R GRNP+TGE +TI A TVPAFSA K FKE
Sbjct:    1 MNKGELVDKVAEKTGVTKREAEATLNALTESIMEAVAGGEKVTLVGFGTFEARQRQEREGRNPKTGESMTIPASTVPAFSAGKLFKE 87
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BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A1J1LMK7_9CYAN (DNA-binding protein HU n=13 Tax=Oscillatoriales TaxID=1150 RepID=A0A1J1LMK7_9CYAN)

HSP 1 Score: 89.7 bits (221), Expect = 4.960e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKEM 503
            + K  +++  A +  +TK QA+  ++A  D +M  VADG+K+ L GFG+FE R RK R GRNP TGE +TI A TVP FSA KAFKEM
Sbjct:    1 MNKEQLVQATAIKAGVTKKQADLIISAICDSIMEAVADGEKVTLVGFGSFEARERKAREGRNPSTGEPMTIPATTVPVFSAGKAFKEM 88
[Close]
BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A251WFF9_9CYAN (DNA-binding protein n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WFF9_9CYAN)

HSP 1 Score: 89.7 bits (221), Expect = 4.960e-20
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            + K  +I+ +AE+  +TK +A+A ++A  + VM  VA+G K+ L GFGTFE R R+ R GRNP+TG+ +TI A TVPAFSA KAFKE
Sbjct:    1 MNKGELIDAVAEQASVTKKEADAVISAMIETVMDAVANGDKVTLVGFGTFEPRERQAREGRNPQTGKSITIPATTVPAFSAGKAFKE 87
[Close]
BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Match: A0A8J6R600_9CYAN (HU family DNA-binding protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R600_9CYAN)

HSP 1 Score: 89.0 bits (219), Expect = 8.370e-20
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 3 
Query:  240 VRKTAVIEGMAERGDLTKVQAEAALAAFTDLVMSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAAKAFKE 500
            + K  +++ +AE+ ++TK QAEAAL A  D++ + VA G K+ L GFG+FE R R+ R GRNP+TGE +TI A  VPAFSA K FK+
Sbjct:    1 MNKGELVDAVAEKANVTKKQAEAALTAVFDVIQATVAAGDKVTLVGFGSFEARERQAREGRNPKTGEAMTIPATKVPAFSAGKLFKD 87
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig707.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST5_ECTSI3.230e-6170.37DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7S1Y344_9STRA9.730e-2258.62Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A835Z9S8_9STRA1.990e-2151.61DNA-binding protein HU n=1 Tax=Tribonema minus Tax... [more]
A0A151ALX2_9CLOT1.490e-2055.68DNA-binding protein HU n=2 Tax=Clostridium TaxID=1... [more]
UPI000B59B4122.110e-2052.87HU family DNA-binding protein n=1 Tax=Leptolyngbya... [more]
UPI001684A9962.110e-2052.87HU family DNA-binding protein n=1 Tax=Pseudanabaen... [more]
UPI00199DAA8D2.980e-2054.02HU family DNA-binding protein n=2 Tax=Cyanobacteri... [more]
A0A1J1LMK7_9CYAN4.960e-2052.27DNA-binding protein HU n=13 Tax=Oscillatoriales Ta... [more]
A0A251WFF9_9CYAN4.960e-2052.87DNA-binding protein n=2 Tax=unclassified Alkalinem... [more]
A0A8J6R600_9CYAN8.370e-2051.72HU family DNA-binding protein n=3 Tax=unclassified... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig707contigP-littoralis_Contig707:129317..140358 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1321778.HMPREF1982_01940
Preferred namehup
PFAMsBac_DNA_binding
Model size586
Max annot lvl186801|Clostridia
KEGG koko:K03530
Hectar predicted targeting categorychloroplast
Exons4
Evalue5.48e-22
EggNOG OGsCOG0776@1|root,COG0776@2|Bacteria,1V9XQ@1239|Firmicutes,24MM0@186801|Clostridia,269KF@186813|unclassified Clostridiales
Ec32 ortholog descriptionHistone-like bacterial DNA-binding protein
Ec32 orthologEc-15_002670.1
DescriptionHistone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
Cds size531
COG categoryL
BRITEko00000,ko03032,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig707.37.1prot_P-littoralis_Contig707.37.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig707 129337..140323 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791476.6309175-UTR-P-littoralis_Contig707:129316..1293361680791476.6309175-UTR-P-littoralis_Contig707:129316..129336Pylaiella littoralis U1_48UTRP-littoralis_Contig707 129317..129336 -
1680791476.6940317-UTR-P-littoralis_Contig707:140323..1403581680791476.6940317-UTR-P-littoralis_Contig707:140323..140358Pylaiella littoralis U1_48UTRP-littoralis_Contig707 140324..140358 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791476.645372-CDS-P-littoralis_Contig707:129336..1293991680791476.645372-CDS-P-littoralis_Contig707:129336..129399Pylaiella littoralis U1_48CDSP-littoralis_Contig707 129337..129399 -
1680791476.6569889-CDS-P-littoralis_Contig707:130338..1304901680791476.6569889-CDS-P-littoralis_Contig707:130338..130490Pylaiella littoralis U1_48CDSP-littoralis_Contig707 130339..130490 -
1680791476.6715374-CDS-P-littoralis_Contig707:131672..1317961680791476.6715374-CDS-P-littoralis_Contig707:131672..131796Pylaiella littoralis U1_48CDSP-littoralis_Contig707 131673..131796 -
1680791476.682928-CDS-P-littoralis_Contig707:140131..1403231680791476.682928-CDS-P-littoralis_Contig707:140131..140323Pylaiella littoralis U1_48CDSP-littoralis_Contig707 140132..140323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig707.37.1

>prot_P-littoralis_Contig707.37.1 ID=prot_P-littoralis_Contig707.37.1|Name=mRNA_P-littoralis_Contig707.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MKCSLLFALALRAQCGNAFVGPIGGLALSNCVSAAVGAQNGIVRRGVAST
PQARAAAASSADSEVSVVVRKTAVIEGMAERGDLTKVQAEAALAAFTDLV
MSNVADGKKINLQGFGTFEGRARKGRTGRNPRTGEELTIKAKTVPAFSAA
KAFKEMRRHPRTKKQGAADGSVVGWK*
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mRNA from alignment at P-littoralis_Contig707:129317..140358-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig707.37.1 ID=mRNA_P-littoralis_Contig707.37.1|Name=mRNA_P-littoralis_Contig707.37.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11042bp|location=Sequence derived from alignment at P-littoralis_Contig707:129317..140358- (Pylaiella littoralis U1_48)
AAGGCAAGCGAAAGAGACGGTCACAGACAAGCGAGATGAAGTGCTCTCTC
CTTTTCGCTTTGGCACTCCGGGCCCAGTGCGGCAACGCGTTCGTCGGGCC
CATCGGCGGGTTGGCTCTCTCTAACTGCGTCTCGGCCGCTGTGGGTGCGC
AAAACGGCATCGTGAGGAGGGGAGTGGCCTCGACGCCGCAGGCCAGGGCT
GCTGCGGCCTCTAGCGCGGACAGCGAAGTGAGTGGGAGGTCGTTGGAACC
GAGCATGTTGTCGGATGGTGCTGGGGTAAGGTGTTGTGTGTCTCACTGCT
GTCATTTCATTTGATGTGTGTGGTGGAACGTTGTGCAACTGATTTTTCTT
GACTTTAACCTAATAATGCTCTTCGATCGAGCTTGATTCTGCGTGGCCTC
CAACCTCCAGTCATGATCTCGGATCATGTGAAATCATATGCTCGACATAT
TACAGCCCTCGTGATGATCGCCTGAGGCTCATCAAGACTTTGCTGCATTT
TTTTTTCATGATACGAGTATGTGCAGCAGACAGCAGTATAGCGATCCACG
CTATATATAGCAGTGGCACAGCAAAAGGCTTCGAGAACGTAGGGCCGCTT
TTAAGGACAGGTGTAAAGTAGGTCGCGTAAGATAACACGCCCCCTGAACC
TATTTTCAAACCTCGATATCTCCACACCGACGAGGGTGCTAGGATCAAAC
TGTATGTATTTGAAAAGCTCTCGACGAGATGGGTCCAACGCCGCCCTTTC
CGGCACCCACACTCGTCCCGCTGTGGAGTGATTGTACTTTAAAAATCGGT
CCGGGAGGTGTGGTATCTCATGCAACCGACGGGATGTACCTTTGCACGGG
TGACCACCGGGCCGCTACAGCAGTACCAGGTACTTGCCTTGATATTGCTC
TATGTATGGTGTGTACCCGTAGACTGGTAGTGTACCGGTAGAGTGGTACC
ATTGAGTATGAAACACGTGTGTCTGCTGTGTTTGTCTTCCTGTACCATGG
AACAGGTCGCGGAAGTTGCGTAGGATACCCCATCGCTAGGTTGATTTTTG
AAGACTTGACTGCCAGCAACGCTCCGCAACAGCAGTAAAACTCGGAGTGT
ACTGCACTGAAGACGAGGTTAAGATTTGGCGTTAGAACTTTTTTTGGTCA
AGAGCTTTCCAAACACGTCCACCAGCATGTCCGGGAATTCAAGAGACACT
TCGGGACATTCGAAAACTCGGGGATATGAAAGGATCGGTATAGACAATGT
TTTTGATTGTATTCGCGAGAATTCGTTTTTCTACTTTTCTAATTCGGCAC
CTCGGACCGAATATGCACCCAAACACCACGCAACAGGCTAAGCAGACCAT
CTCAAGATTTTGTCTCACACTTGCACGAAAAATTGCCTTTTATTATTCAT
CCCCTATCCTAATCGGGACCAGGGATCGGGTTGGTGTGTAGTCTCCTCTA
ACCCCCGGCCCCATACTGCAATCGAAACGCCTCCATAGCAAGTAACCTGG
ATTGACACACATGTCAACCGAAGTTGGCCAACAACCCTCCCAACACGAAT
ATTTGTTTCCTCTTCCCCTGTTTAATTCAATGCCCCATATCGTACCTCGC
CATGGTTGTCTATTGTACTCCCCTTTCCCTTCTTGCAACACGAAAGAGAC
CCATGCTGGATCTTTCATGTTCGCTCTTAAGTACACCAGGAAAGAGTCCG
ACAACCATCTTCCTTCTTTCTTGATTACTACCTCTATTACCCCCCCCTGC
AGCTAACCTTGTTGCACCTCCTATCCTTCCTGAGTGGAGTGCGAACTCTT
TTGGATTCAAACTCGCCCCCGCGCCCCTACCTTCCTTCCGCCATTGATCT
GCAACCGCTGCTATCCCTCTCCTCAGTCCTTTCGCCGCTATTTCTCTCTT
CCGTACTTCCCACTCCCTTCCCGAACGATACGTCATCAACGGGGATTTGT
TTCTCAACCCCTTCTCTTTGTATATTCCGAACAACTCCAGCATCAAATCC
ACCGCCCCCCTTTCCCCCCCCCCTTCTGTCCTCACCAGAGTTTCGCCCTT
CCTTCCTTGATCCCCTTTCGATCCTCTCATGTGTGCTTTCATATTTTCCG
CCCTCCTTCTCTCATCTTCTCAACTGCTCTTCTCCTGCAAAAAAAGCCAC
GTCTCCTCTACGCACACAGTGTATCTCGCGAACTTCCCCGTTTCTCTCTG
CAAACAGCTCCGATGCTCTCAGCAACAAGAAGTACAACAGTGCTAGGCCT
ATCCACAGCACCCTCCCCCCTTCCCCTCCCGATCCCACCTCCTCCTGCAT
GTAACTCAGCATCCCCCATTCAACAGCCTGTTTGTCCTTGGTTGTGTACC
CTTGTATGTATGTGACTCTTCTTGATACCCTGTCCCACTCCTTTTAGGTA
CGGGCTGCTCAGCGGTAAAATCACGTTTGCGAACTGTTGGTGGAATAAAT
TGATTGCCACCAACTTCCCCTTTTATCGTCAACCCCTTGTACCCCAGAGC
TGCGCTGCAGTATCCCATGAACTCCCCCATCTCTTTGACAACTTCTAACT
CGCTTCCTCCGTCCGTGAATCCAAGGACTCTTCTTCACTAGCCCCCTCCA
TGCTACCCACCTCCTCCAACTCCCTTCGTACGCCTTTCTAGACGAAGCTG
CAACTCTTCCAGGTGCGTAGCTTCTCGCACAACCTCTGCAGACGGCTGCC
GTACCTTCGTCCCCAGCGTCTGCACCTGCCGTACAGTTCCGGGTGATTCA
AGCTTCAATCGGTTATCAATGCTCGCCTCGTTCCATCTTGTGATTCCATC
TGCCAGTACATTCTAAATTCCTGGGATGTGTCTCGCTTGGAGACACCATT
CCCCCTTTACCTCTAGCACCCTCATCACTCTCATCAACGCCCCAATTCTC
GCATCCCCCCCCCCCCCCCCTGCACTTATTTTACCCACGCCACGCGCTAT
CGTTGTCCACTCTCATAATCACTGCTTCCCCTTTCCTCTCCGGTCTGTTT
TATTCATCTCCAACAGCACGTATTCCGTCATTACCATGGCCATCAACTCG
AGTAAATAAATGCTGATGAAATCCCCCTCCCCTGCTTGTCTGAACCTAAT
CGCCCTCTTCTGTACCTCTTGGGGCAAACCATACCTCCAGTACACCTCGG
TCTCCATGCACAGACCCCCCACTGCTTCTGTGGATGCATCGGAGTACCAC
TTTCTCGATGGTACTTTCTTCGCGAAACTTCACGACGGCGCCGTGATCCG
CTCTCTACTTGCCCTGCCCTGTGCCGCCTCCACCAAGCTATATCTGCCAT
TAATTCTCTCGATAGCCACAACACCTTCCCCGCGTGTGCCTTCATCCTCT
GTCTGCCGCACGTACCCCCCCCTCCGGCCCGTTCCGCCCCACTAAGGTGC
AGTCCCGCCAACTGCAGAAGCCCGCCCCGCGCACGAAGTACCGTCCGGGC
CGAATCACGAACGCCGCGTGGTGCAATTTTTCTGCCCAACACCGGTACTT
CTTTCACCGTTGGGGTTTTCCTCGTACTTGGCTACTCTTCTAACCGCCTT
CGCAAATCCTGAACCTTCCCGGCCGGCAAGGAAATCGTGTGGGCCTTCGT
CCGTGTCTACCAACCATCCCAGCACCACTTGTTCAGCGTCCTGATCAGTC
ATATTTTTCTTGGCTGACACCTGTGTTCCTCATCCTGTTCCCTGTCTCCA
AGCATCTCGTGGGGCAATGATGCTAGTCCTTTCGTCAAAGCTAAACGACT
CCCTCCCTCCCTCCCTCCGACTCATGCTGTACCTCCATGCTACATTGCGT
CGTCAACGAATAACCGCGTCCACCCGGGATCCTCTGCCCCCCCCCCTCCT
TTTACTTCCTGCACTCTACATTGCGTCGGCACTGGCACTATCCGCTTTCC
TGGTGCCGGCGCAATTTGTACATGCTCCTTCGTCGTTCTATTCCCCGCCG
GTGGGGTTCTCACACACTTCTGACTGGTACGCCTTTGCTCATCTTCTATC
GCCGAGGCCACCAGCCCAAACTACCCTGGACTGCCCCTCCAGCCAAAGTG
AAGGCGAAAGCCCACCACAATAAAATCCTTCACTTTGTACGCGAAGGCCG
GCGTCCCCGCCGGGTCTACAGGTGTCTGCCTGAACGCGCTCTTTCACATC
CATTTCCTGGATCGAAATCCCCTCTCGTGGGTACTTTACCCGCAACCCCA
TCAACCGCATCAACGACTCCTTCATCACTGTGGCCATTTCACACCCAGGG
ATATACTCAAAGTACGTGGACGCGTTCACCGTCGGTTCTCCCTCGGACTC
CTTTATCCCCGCCGAGAATGACAAATCGTGCACCACTCGCAGCTTTTATT
TCACCTCTTCTATCATACCCCCTCTGGCTACACGACGTTCTCTGTTTCAG
CTACTACTCCTACCGGTGACACCCGCAAGCCCGGAATATTTTTCGCCTTC
CCCTGTGGAAACACGAGCGCTTTCCCGGCTACCGCACTGCCTTTCCCAGC
AGCTTTTTCGCCGCCAGCCATCGTGCTCTATCATAGTCTCTACTTTGCTC
TGTATTGTTCCCCTCCCTCCAGTCGGCCCCGCCTCTCCACGGAGCCCGCG
CCCTCATTTTTTTGCCGCGGGCTCCCCCTCAACCGCCCACCGCGCAGCTC
TCTTCTTTTTTACCACGACTCCGGAGTAGTCCACTCCCCACGGGTGCGTG
TACATGCACTCGTGACGTGTCCTGGCGGTGTGGTCGCAGACTTCGTGCAA
GCTGCACGCGCGGCACTCGCTCGACTCCTTCTCGGTAACCTTGGTTAAAG
GTCCCCCGCCCCCCGCCCCCCCCGCCGATATTCGTGTTACCGCTGCCCGC
GCCATTGTATCCCCCCCGACCAGCACCTCTTTGGTGTTTGTTGAACCCGC
CCCCCCCCGCCGCCCCGCCGCTGTAGCTGCCACTTCCCTCGGCCCCAGCG
CTGTGGCCCCTAACGAGCCTGTCTGTATCCGCCGCCGCTCGGGCCGGCTG
CCCATCCTCCGCCATGTTCCCCGCCCGCTCCCACGGACGTAAGTTGCGTC
ACCGCCGCTATTTCCAGCATTTTCCAGACTTCCGTGAAAGCAGGCAGCGG
AACCGGGCTTACCTGCCCGTTGTCAGCAGACGGTATGCCCCCCCCCCTCC
TTACCGCTCTGCAACCGCATTCCTTCCTCCGCCAGCCTGCTCGCCCACTT
CTCGAAGTCGGTGTCGAACCGGAAACTTATCCTTGAACCTGTCCGTGATC
ACCACCTGCCGGTTTTGCGAGAAGAAGTTCCGAATGTCCACCAGCGTCTT
GGCCAAATCTGCCGCCAAAAAGGCGGGCCGGCGCCTCGCCGCTGTTTCTA
CTTCCACCACGTTCGTTGCCAGCAAGCCGATGAGCCCGAACAAAGCCTCC
ACGCGTCGTTCCAAGTCCACTCCCGCCGCCCCCCCCCCCCAGGTGTGTCC
TCTTGGAGACATGCCGCAGCTGCACCCCGCCCATGATTAGAACCTGCCGC
TTTCGATCCCCGTCCATCTGGTATTTGTCCGCGGTCATCATGATGCCGTC
GGCGCTAAAAGGCAGCCCCCCCCCCCGTTCCCCCGTATACATGAGAGACC
AAATCGCCGCCATCCGACCACCTGCCCTGTACCTCTTCTCGACCGCCGAC
TCCTGCTGCGACGGCTGGAGTGGTTGCGCCGGCTGCTGCTGCGGGAACGG
CAGCGGCTGCCGCCAGGTGTGCTACTGTTGCCGCTGTTGATCCAAGTTGG
GGTGTTACCGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTCACTGCTGC
TACTGCTGCCGCAGCTGTGGCGTCTTCTGGTCGCCCCTCGGTCGATACCA
GCCTCCGCCCCCCCGCCGATTTCGCCCCGCTCCCCCGGCAGCATGCCCCG
CACGTCCCCCCCGAAACCCGACACGCCCCGGTCATACCCCGCCCCGAATT
GGGGCCTGCCTCCGAGTGAACTCACAATTTTTTCACGGTTTTCATAGGCA
GGGTACGAAAGCGGGTCGCGTGGACCAGACTGCTGGTTGGGGAGAGGGAA
CTGTGTGCGTGGGGCTGGGCCTAGCGAATACTGGTGATCGTAGTAGGGGA
ACTGCAGTTGGTCGAGTTGCTGTGCGCGCTTCTGTGCGCGCGGGTGCGGC
CCCAGGCGCGGTACCATCGGTCCACGCGGTTGCAACAGGGCGCTGCTACT
GTACTGCTGCTGTTTGCTTCTTCGGACGGCACAGATCTCATCCCATACCT
GTCTTCTCTCGGCGCGCACAGCAACTCGACCAACTGCAGTTCCCATACTA
CGATCACCGGTATTCGCTAGGCCCAGCCCCACGCACACAGTTCCCTCCCC
CTAACCAGCAGTTGGGCCCACGCGATCCGTTTTCGTACCCCGCCTATCAA
AACCCCCCTTTGCAACCCCTGGCCCTCTCCTGTCCTCCTTCTGTCCTCCC
GTCACTTTTCCTGTTCGTAATTCTTCGCCTGCTTCCTTCTGGCTCTGCTG
CTTGCTTTGGGTTTAAACGATTTGTGCTTCCTTTTTCTTTTCCCGATTTT
GGGGCCCCGCACTTGGAACTATTTCGCATTCTCACGGCCGTCCTCTACCA
TATGTTATTATTTTTAATCTTTCTTCGCGTTCAGTCAAGACACCAGATTG
CGTCAAACCTAATCTTCCACGTTGGAGCCGGAAGAAATGCGTGAGAGGCG
GCGCTTGAGCATTCTCGTGACACGCATGTTTTTTCGTTTCGAACTCCGCA
ATATTTTCGACGATTCTGAAACCAAGATAAGTTCCCTGTGACTGAGTCAA
AGACAAGAGAGCGAGCACAAGAGGACGCTCAAATAAGACTCGTGGTGAAG
GCATTCCTGACTGAAAGCATGAAACACGTCAGAGACGCCATGTGGCAGTG
ACGTGCGTGTTGGCACGCCCAGGTCTGCTGCTGGGGCCGAGATGTCGATG
GTAAAAAATACTAACGGAGGATGTGGTACAGCAGCCCAGAAACCGTCCGC
ATCTCAGCCCGAAAAAATCAAATCCTCCACTGCTATACTCGTCGTGATAG
GCTTCGATGTCTGAACTGCTGGTCTGCAGCAGTAGCGCTCATACCATCAA
CTGCCTAGCATGACCCACGGTTCAGGACCATGATGGCTGCTACGCCAGTG
CAAGATGTTTGGTTTCGGGCTGAGATGCGGACGATTTTTGGAGTGCCTGA
AACCAGAATTTCGGTCTCCGACATCTCGGCCCCAGCATCTCGCTCACGCA
AGTCACCAACTACATGGTGCCTTCTGCTTGTTTCAGCCGTGCATGTAGGA
ATAGGCACAGGGGCATGTCGATTTCCGAAAACCATACCGAAGAATGAGTG
GAGAATCAACCCTTTGATTGGACCGATCCCGAAAGGACATTCGAAAAAGT
GACGCCATGGTGCATTTTTTGTTACCGGAATACGAAATACTTCGAAGTAT
ATGTTTCGGGGGCACTCGTCGTGGGTTGAAAACATTCCGTCGTAACCAGG
GGACGCCTGAAAAATGTCGCCGGGTTTTCTTCACCAGACTGAAGTTTTCA
CATTTTCGAGTCTTTCTGCGTAACTTCTGCTCGAGGTGAATTCTCTCTCG
ATTTTGTTTCTTGTGTTAAGACGTCACGAACACGCCCCTTTATCGAATTT
GTCAAAATTCGTGGCTTTCACGCGAACGGCTCAAAACGCCCGTTTTCTAA
ATTTTTTCAATTTTTTCAAAATTTCCGCAACTTACCCCATCCGATAGTCG
CCCTAAGACTACCCTCGAGAATCTTGCCCATGGTTACCGGGGGGTGTAAT
ATCTTGTGCAATCGATGGCAGAGGCATGTGGTCCGTTCCGCAAAAATTGT
TGTACGATCCTACCCTATAGCTGCCGGTGTGTCGCCCATCGTATGTTTAT
CCTTCTCCCCTTCTCTCCTCTTATAAAAATGGTTGTGATACAGAACCCCT
CCCTCGAAGACTGGATTTTCGAAAGTCTCGAAAGTTGTCAGTCAGTTAGT
TGCCGCAAAGGGCTGAATTGTTGTTGGGTCGTTGGGAGCTCCTGTGTATC
ATATCCATATCATACATACCTGGTACCTTATGTCGTACATCTCGTATGGC
ATCTGGTCGTGGGTGCGACGTATCCCAAACGAAGCCGTTTTTTGTGCCCC
ACACTACTCCTCCCGGGACGAAACACGTTTACTGTCTGACACACACTGAT
AGACACCAGGATGCTGGAAAATGACTTCGTCTTGGAATCAGCATTTCATG
CGTGCAGTTTACCACAAAGCGATAGGCTTCTTGGTACAGACTGGTTCCCG
CCCGCCCCACGACGGTGTAGTTTTTCGTCAATTTCCACTTGATTTAATTA
TACTTGCAGCAGTTTGTTAATGCACGCCAGGTTTCGTGATGAAGGAAAGT
CAGCCGATCGCGATTCCACTCCACCCCCTCCCCCCTCCCCCCCGCAATCC
GCCACCGCTACGACCCCCCTTCACTGCTGTTCGCACTTTTTGTCTCTGAC
ATGGCTCTGTTGGAACACCTGTTGATGCGTTTTCTTGAAAAAAAACGGGA
TTTGTTCTCAAGGTGTCAGTTGTCGTAAGGAAGACAGCGGTAATCGAGGG
CATGGCGGAAAGGGGAGACTTGACCAAGGTTCAGGCCGAAGCGGCGTTGG
CAGCTTTCACGGACCTCGTCATGAGCAACGTCGCCGGTGAGGAACGGTAT
GAAAGTGTTTCAATTGATAATTCTCTACCCCCTTTTACATCCTCAAACCC
CCGATACGTACAAAATCGTGACTCAGTAACGTTTGTTGTTGTTGTTGTTG
TTGATGTTGATTATCGTGTTGGCTCACCACTATCCCAGTCTAGCCCGTGG
TCTCAAACCAGGCACTTGTGCTAGGAGGAAAAAAAAAAAAAGGAAATGAA
CGATGGTCACCCAATCAAAATCAGACAGGGTACCGTTGGGGTACCCTCTC
TGGTGGCCAAAAGTACAAAAATACAGAAAAGAAGTGCACGGTAGGAAACG
GGGGTCGTGAAGAATGAAAACATGACACCTCGGTTCACTCATTAGTTTAG
AATACTGCTGTAATGCGTTCCAAGCCGATGATCGTCACGTTTTGTCGTGC
GGGGGCGGGGGGGAGATAACCGCCGTTTTTGGCGCAACTTTTCGCCACCC
CCAACAGGCGCCACATCGTCACGGAAAATACTCGGAAATTTATAGCTTTT
CTTCGTTTCTTCTGTTGCGGTGTGTCCGTACTGTTTCGCGACGGGGTGCT
GGTTCTCTCTTGAAGAGCTTGTAGACACGGGTGTCAACTGTTTTTTTCAC
CCCGCGAGTGGCTGATTGAATGCCCGGATGTATTCTCGTGTATGATACGA
AAGAAGCAATAACTGCGTGCGTCCGGGGTGCACACGAGGTAGCTACTGCA
GCTGTGGGTGACAACCAACCGGCCCCACTTCCACGAGGCAACCAACTGCA
GATACCGTCCGTCATTGGCGCTAACCAGCTGCACTGCTGCCCTAATTTCA
TTTCGTATACCGAAAGTATTTAACTTATTACGAAGTACAACGGAGACAAA
ACACGAGCATAATGTCTTGCCCAACGCTCTACGAAAGCAAATGCCGGCTT
GTTCGCGTTCGTTCTCTTGAATGTTCGTCTTTTTCCGTCTTGATTTGTTT
GCTACTGGTTGGTCTCAGGGTAGGGGGAAAACATCGGCCTTCGGGGTTCC
GGAACGTGACCATCTGCTCCATACTTCGAAGAACCTCGTCAAGCTACTTC
CATAAAATAGACACGTAAACCTTCACACCCCATAATACATGGTACACACC
TACGATACCCGCCTCCTTCGGCCTTCCAATACTTCGTATTTTTTTCTTGA
CGGGCTTCTTGGTTGCAGACGGGAAAAAGATCAACCTTCAGGGCTTCGGA
ACCTTCGAGGGGCGCGCCCGAAAGGGCCGCACAGGCCGCAACCCGCGCAC
GGGCGAGGAGCTGACAATCAAGGCAAAAACGGTGCCGGCGTTTTCGGCCG
CAAAGGCTTTCAAGGAAATGGTGAGAAGAGCACCCGCCTCCCTCCTCCGC
GCACGAGCAGCTTTTTTTTGTTGTCGTGTGTTTGTACGGCCCAGCTTTCG
ATGCTACATACTACGCTGCTGTCATGTTGTTGTCGTCACGTTTTAGCGTT
GGACTTGTTGCTTGATGTGCCGGTCGTGGGTTCGTCTTTCATCATAGAGC
CTACTGCTCGAACTCGAAATTGCGATTTCCGGGTTTCCTAGGGGTTGGAG
GCGGTGCATTCAATCCAAAACATCAACGGCCTGCAACGCAAGCGCTTCAC
CGATAGTTTGCTTTCCGACGTTTGATTAGTCTCCCAGCTCTAGTCTCCTG
GCAGCTCGCTCGGCCACGCGCATTCTATATTGATTGATCCTCTGTTCCCA
CCAACAACGTACAAGATGTCGTGGAACGGACTTACTTCGAAGCGTATGAT
ATCCGACCTAGATCCCGAGTTCAAACGTTTGCATCAGGTGATGTGTGTCG
TGTGTGTGTTGACATCCCTTTATTTGGACGCCACTCTACACCCTTCGGGT
AGGTAGACGCTCCAACCGGGGTCACACAGGGGGAAGTCAACACGGGAGTT
TTTTTTTTTTGCTCCACTTCCCTCTGTGGTGCTTGCCTTGTATTGGTTGA
GCTTTTATCGCGAGAAAGGGGACAGCAATCCCTTTCCCTCGTCGATGGTA
CGATCGAAGTTTGTTTACTCACGAATTGATTGTTTTCCACTTTCACGCGC
AATGTGAGAGAAAGACCCAGATCATGTTACTGCACTGGGATTCGAACTCA
CGCGCGAATGTTGGGAGGTTGCGTGGATAACCAACTTAACCACCGGGGCG
ACCGGTTATGATTGGAAATAAAAAAAACGCCTTTACTCATGCGAATGTCA
TTTGTGGGCGTGGGTACGTTCCTCCCGTTGTTTTGATTCGCTACTTTTTG
AACAGGTAGAGGCGGCACCCAAGGACTAAGAAGCAAGGCGCAGCGGACGG
CTCAGTCGTAGGGTGGAAGTAAGGAGGCACCTACCGCTTCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig707:129317..140358-

>mRNA_P-littoralis_Contig707.37.1 ID=mRNA_P-littoralis_Contig707.37.1|Name=mRNA_P-littoralis_Contig707.37.1|organism=Pylaiella littoralis U1_48|type=CDS|length=531bp|location=Sequence derived from alignment at P-littoralis_Contig707:129317..140358- (Pylaiella littoralis U1_48)
ATGAAGTGCTCTCTCCTTTTCGCTTTGGCACTCCGGGCCCAGTGCGGCAA
CGCGTTCGTCGGGCCCATCGGCGGGTTGGCTCTCTCTAACTGCGTCTCGG
CCGCTGTGGGTGCGCAAAACGGCATCGTGAGGAGGGGAGTGGCCTCGACG
CCGCAGGCCAGGGCTGCTGCGGCCTCTAGCGCGGACAGCGAAGTGTCAGT
TGTCGTAAGGAAGACAGCGGTAATCGAGGGCATGGCGGAAAGGGGAGACT
TGACCAAGGTTCAGGCCGAAGCGGCGTTGGCAGCTTTCACGGACCTCGTC
ATGAGCAACGTCGCCGACGGGAAAAAGATCAACCTTCAGGGCTTCGGAAC
CTTCGAGGGGCGCGCCCGAAAGGGCCGCACAGGCCGCAACCCGCGCACGG
GCGAGGAGCTGACAATCAAGGCAAAAACGGTGCCGGCGTTTTCGGCCGCA
AAGGCTTTCAAGGAAATGAGGCGGCACCCAAGGACTAAGAAGCAAGGCGC
AGCGGACGGCTCAGTCGTAGGGTGGAAGTAA
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