prot_P-littoralis_Contig702.10.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 3.610e-187 Identity = 312/415 (75.18%), Postives = 334/415 (80.48%), Query Frame = 0
Query: 48 VSAFGSGGGLSQQLLS-RSSRRAGDGIDEGLLLQQLSPAVRRRQLSRTGEERGEALSAASRRGAFIVEGGH-NHAAASTTKDWRDLGVEEERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGGEQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGG--ALTFTEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYSDLI 458
V AFG G LSQQ S RS R AG G +RR ++ + + + A RR AF+VEGG N +S+T DWRDL EEE LCE IVEN R+Q LQVE+ERKESRP+TV EWAVAAGHPSAHQLM ALQEGRKAQRT+ LCHQGLVRSVAYRYKQVSR+LSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKAS+LRAIADKDRLVRVPVHAQD AMRILA SHALQLESG G PTDAQL++ALGMPEASV LYRKS LPQN+ADLDN ALS SP+G G G RG G +GGEQWPWEASQLAQA VVRRDMMRAM+ACLSPTE RALRLRFGL G KEG A GG ALTF EIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAY+DLI
Sbjct: 40 VCAFGYVGVLSQQQSSSRSLRPAGGGRG----------GIRRPRVPSSPAQEKALFATARRRNAFVVEGGGANPVTSSSTADWRDLTKEEETALCELIVENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESG---GDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGG-GSRG-GRVGGEQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 3.110e-181 Identity = 285/350 (81.43%), Postives = 304/350 (86.86%), Query Frame = 0
Query: 115 GGHNHAAASTTKDWRDLGVEEERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGG----EQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVAR--GGALTFTEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYSDLI 458
GG N +S+T DWRDL EEE LCE I+EN R+Q LQVE+ERKESRP+TV EWAVAAGHPSAHQLM ALQEGRKAQRT+ LCHQGLVRSVAYRYKQVSR+LSLDDLTQEGNVGLL+AVEKFD TKGTRFSSYAVFRIKAS+LRAIADKDRLVRVPVHAQD AMRILA SHALQLESG G PTDAQL++ALGMPEASV LYRKS LPQN+ADLDNPAL SP+G RGGS G G GS+GG EQWPWEASQLAQA+VVRRDMMRAM+ACLSPTE RALRLRFGL G KEG GGALTF EIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLL+Y+DLI
Sbjct: 37 GGANPVTSSSTTDWRDLTKEEETALCELIIENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESG---GDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQG-RGGS-GAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.340e-57 Identity = 128/327 (39.14%), Postives = 195/327 (59.63%), Query Frame = 0
Query: 130 DLGVEEERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGGEQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYSD 456
+L + E L I E++R+ A Q ++E R V EWA AAG+ + ++ AL+EG+KAQ +V + +VR++A +Y +++SL+LDDL QEGN+GLL A +KFDP KG RF +YA FR+KAS+LRAIA+KDR +R+PVH QD A ++ + + LQ+ G PPTDA+++ L M + VT +R+ +D A++ + +V R + P S++ + D+ R +E L+P E+ AL+LRFGL+G G LTF E+G +M+ SAEGIR++V R++ KL+ EA LL Y++
Sbjct: 46 ELDPDVENALYAAIREHSRIHAKQEQLECILGRSALVAEWASAAGYMDSMSMLAALREGQKAQTKLVKSQRAMVRAIAKKYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVTLG----RPPTDAEIAATLDMLPSEVTAHREM--------MDKEAVTVN-------AVSDRDVMAFAARATPQARSEMVE------DLKRVLELYLAPKEIEALQLRFGLDGQAA------GPLTFKEVGGSMQTSAEGIRRIVSRALDKLREG-EAWRLLSDYAE 340
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: Q39515_CYACA (Chloroplast RNA polymerase sigma subunit n=2 Tax=Cyanidiaceae TaxID=265316 RepID=Q39515_CYACA) HSP 1 Score: 134 bits (336), Expect = 2.860e-30 Identity = 101/317 (31.86%), Postives = 163/317 (51.42%), Query Frame = 0
Query: 135 EERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGH-PSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGGEQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQASDEANGL 450
EE EL +Q+ ++ Q + + T EWA G+ +L + +++GRKA+ +V + LV S+A RY +R ++L DL QEG++GL++ VEKFD +G RFS+YA + I+ SI RAI+D R +R+PVH DT I + ALQ+E G PP++ ++ ++G+ A L + S +N+ L+ P S G V GE + E+ A + + +R + + + CLS E +R+RFGL G T E+G ++ E IR++ +++ KL+ E N L
Sbjct: 295 EEIELSKQVCILMDLEQFQRSFREEHGKSPTESEWAQGCGYGDDVEKLREHIRDGRKAKERMVTANLRLVVSIAKRYS--NRGVALQDLIQEGSIGLIRGVEKFDAERGFRFSTYATWWIRQSITRAISDSSRSIRLPVHVHDTISLIRKQTKALQVELG----RPPSEEEICESVGIDRAKYRLVMECS--RNIVSLETPLRS-------GDDVHFLGESLIAPEE---RAEENCSRDTLRESIEKVLH-CLSTREREVIRMRFGL--------TDGRPRTLEEVGSRFNVTRERIRQIESKALKKLRTPAENNFL 584
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 129 bits (323), Expect = 6.690e-29 Identity = 94/284 (33.10%), Postives = 156/284 (54.93%), Query Frame = 0
Query: 162 RPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGG---EQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQ 442
RP T+ EWA + G +L L G+ A++ ++ + LV S+A RY++ R L+L DL QEG++GL++AVEKFDP KG +FS+Y+ + IK +ILRAIAD+ R +R+PVH D +L T E + G PT+ +L+ + +P + ++ S P D A++ + S G+ GE +G + P +Q+ +AN+++ D+ + + LSP E +R+RFGL+ + T EIG ++ E +R++ R++ KL+
Sbjct: 204 RPPTLEEWASSVGM-QPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQK--RGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHD----LLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMDAQRRAMT-----KKSSSAGKGGEVQLGDSIKDDGPCP-TQVTEANMLKEDIEKLV-CTLSPREQDVIRMRFGLDADKPK--------TLEEIGNVFSVTRERVRQIEARALHKLR 465
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.170e-28 Identity = 104/295 (35.25%), Postives = 161/295 (54.58%), Query Frame = 0
Query: 152 LQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSR---GGSVGRRGEGSMGG-EQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQ 442
L V +ER+ SR EWA G + ++ R A+ T++ + L S+A RYK R L+L DL QEG+ GL++A E+FDP KG +FS+YA + IK SI+RAIAD+ R +R+PVH D I + L LE G PTD +LSL L +P + YR+++ ++V ++ +L+ + +GS GG E S+ E P + +Q + + ++ M + LSP E +RLRFGL+ +G AR T EIG+ ++ E +R++ R++ KL+
Sbjct: 96 LAVRLERQPSRA----EWAAHMGVDEDTLKLIMIRSSR-AKTTMISANLRLAVSIAKRYKH--RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELG----RTPTDEELSLRLQVPTQKIEFYREAA--RSVLSMEQ-SLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRTQQS----MLKENMSQLLGTLSPREQEVVRLRFGLD----DGRAR----TLEEIGQVFCVTRERVRQIESRALQKLR 364
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.370e-28 Identity = 104/316 (32.91%), Postives = 169/316 (53.48%), Query Frame = 0
Query: 131 LGVEEERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGS---RGGSVGRRGEGSMGG-EQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQ 442
L EEE L QI +A + E+ + R ++ EWA G + ++ R A+ T++ + L S+A RY++ R L+L DL QEG+ GL++A E+FDP KG +FS+YA + IK SI+RAIAD+ R +R+PVH D + + L LE G PTD +L++ L + + YR ++ Q+V ++ S +GS +GG E S+ E P + +Q A +++ ++++ + LSP E +RLRFGL+ +G AR T EIG+ ++ E +R++ R++ KL+
Sbjct: 30 LKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSAR-AKSTMISANLRLAVSIAKRYRR--RGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELG----RHPTDEELAMRLQVTAQKIVFYRDAA--QSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHA---MLKENLLQLL-GTLSPREQEVVRLRFGLD----DGRAR----TLEEIGQVFCVTRERVRQIESRALQKLR 324
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A7S1ZIJ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIJ9_TRICV) HSP 1 Score: 125 bits (314), Expect = 1.390e-27 Identity = 100/314 (31.85%), Postives = 162/314 (51.59%), Query Frame = 0
Query: 135 EERELCEQIVENARVQALQVEMERKESRPITVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQ--VSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGG-SVGRRGEGSMG--GEQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQA 443
EE EL + E R+Q L ++E + R T EW A+G +A L DA+++G +A+ +V + +V+ V Y + + + DL QEG V L++A EKFDP +G RFS+YA++ I+A++ R+ + R+V VP +T R+ T L+ E G A PT+ +L++A G+ E + ++ + Q LD ++ + G+ GG S RGE M + + +L R ++ AM LSP EV L LR+GL GG LT E+ R + L + +R+M+ + + +L A
Sbjct: 197 EEVELGTKTQEAVRLQTLHDDLEAQLGRTPTDAEWCAASGKINAEALQDAIRDGMEAKNRLVTANLRMVQGVVNLYIRNGLGSQYNAGDLMQEGIVALIRAAEKFDPGRGFRFSTYAMYWIRAAVKRSQILQSRIVVVPQRLHETHKRVEKTRRQLRTELGRA----PTEEELAMACGLSELQLERCERA-MDQRCYSLDAELVNRNKPGAGGGPSRSGRGETVMDLVDARSHDDMHRLLSREHARESLIEAMRRYLSPHEVDLLLLRYGLMDERTLPHGFGGPLTIAEVSRLVGLKPDKVRRMINKCLRRLSA 505
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE) HSP 1 Score: 125 bits (315), Expect = 3.160e-27 Identity = 96/280 (34.29%), Postives = 146/280 (52.14%), Query Frame = 0
Query: 165 TVHEWAVAAGHPSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGGEQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGAL--TFTEIGRTMELSAEGIRKMVFRSIAKLQ 442
T EWAVA G +L+ L KA+ ++ + LV SVA RY+ + LS DL QEG GL++A EKFDP +G +FS+YA + IK SI+R IAD+ R++R+PVH D R+ + LE G PTD +L+ L + + YR ++ Q ++ P S + G G+G G E+ P + AQ++V+++ + + LS E ++ RFGL GGAL T E+GR L+ E +R++ R++ KL+
Sbjct: 228 TEEEWAVALGM-DREELVKELSRASKAKMAMLAANLRLVVSVAKRYR--FQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKAT----LEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAA--QATLSMEAPRTIASKTSTSPGKKVEMGQGVSGPEKTP---DKQAQSDVMKQKVTELLMT-LSIREQEVVKARFGL----------GGALPRTLEEVGRDFRLTRERVRQIEARALHKLR 484
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Match: A0A3M0YZM3_9CHLR (RNA polymerase sigma factor (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M0YZM3_9CHLR) HSP 1 Score: 119 bits (297), Expect = 5.210e-27 Identity = 90/270 (33.33%), Postives = 145/270 (53.70%), Query Frame = 0
Query: 176 PSAHQLMDALQEGRKAQRTVVLCHQGLVRSVAYRYKQVSRSLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASILRAIADKDRLVRVPVHAQDTAMRILATSHALQLESGSAKGTPPTDAQLSLALGMPEASVTLYRKSSLPQNVADLDNPALSCSPEGSRGGSVGRRGEGSMGG---EQWPWEASQLAQANVVRRDMMRAMEACLSPTEVRALRLRFGLEGMGKEGVARGGALTFTEIGRTMELSAEGIRKMVFRSIAKLQ 442
P A +L ++G +A++ + + LV S+A RY+ R L L DL QEG++GLL+A+EKFD TKG +FS+YA + IK ++ RA+AD+ RLVR+PVH +T RI A L + G PTDA+L+ LGM E + R+++ Q+ L P VG + ++ + +A A + ++R+ + A++ LS E R L LR+GL A G T E+G+ ++ E +R++ +++ KL+
Sbjct: 7 PEAAKLRRIKEQGDEARQKMAAANLRLVVSIAKRYRD--RGLPLLDLIQEGSLGLLRAIEKFDHTKGYKFSTYATWWIKQALSRALADQSRLVRLPVHLGETLNRIQAARRQLT----QSLGREPTDAELANHLGMSEEKLRELRRTA--QDPVSLATP-------------VGEEADSTLADFIPDPHALDADDAAASGMLRQQIAAALDQ-LSERERRVLELRYGL--------ADGQPRTLEEVGKAFGVTRERVRQIEVKALRKLR 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig702.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig702.10.2 ID=prot_P-littoralis_Contig702.10.2|Name=mRNA_P-littoralis_Contig702.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=459bpback to top |