prot_P-littoralis_Contig701.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig701.3.1
Unique Nameprot_P-littoralis_Contig701.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length219
Homology
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BLAST of mRNA_P-littoralis_Contig701.3.1 vs. uniprot
Match: D8LSZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ0_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 3.280e-104
Identity = 164/214 (76.64%), Postives = 183/214 (85.51%), Query Frame = 0 
Query:    5 TMEEMRVIINNDMPGMYSRMQGEDDILKVLELEGAMELECERRDTDARVMIRNAIDRLEQQQRAIVEPSEQAFVAKVRGVEHERAQAASHIQEQAEEAAARERDIERMQEAVEKTQAEIENTVDAHIVEMPRVQNSIGLYANITGIKWNYETEGEITAGWLIPPETGAGARAREGDGRAVVQGFQFDAAGKDDFEVAHKLWDIIDGKTRAMVEA 218
            T+EEMR I+NNDMP +Y R  G DD+ +VLELE AME+ECERR+ DAR MIR+ ID LEQ+ RAIVEPSEQAFVA++R VEHERAQAASHIQEQAEEAAARERDIERMQ  VE TQ EIENTVDAH +EMPRVQN+IGLY NIT IKWNYETEGEI AGWL+PPE G G +    +G AVV+GFQFDAAGKDDFEVA+KLWD+IDGK RAMVEA
Sbjct:    8 TLEEMRDIVNNDMPQIYDRTAGVDDVREVLELEAAMEMECERREMDARAMIRDTIDVLEQRHRAIVEPSEQAFVARIRVVEHERAQAASHIQEQAEEAAARERDIERMQGEVEDTQTEIENTVDAHTMEMPRVQNAIGLYTNITRIKWNYETEGEIMAGWLVPPEAGVGMKGA--NGTAVVEGFQFDAAGKDDFEVANKLWDVIDGKARAMVEA 219
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BLAST of mRNA_P-littoralis_Contig701.3.1 vs. uniprot
Match: A0A7S4N5F9_9STRA (Kinetochore protein Spc24 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5F9_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.710e-6
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 0 
Query:  133 EMPRVQNSIGLYANITGIKWNYETEGEITAGWLIPPETGAGARAREGDGRAVVQGFQFDAAGKDDFEVAHKLWDIIDGKTRAMVEA 218
            E+ +++  I LYANI+GIKW+Y+ EGEI  G +  P      R            F  D    D+F+VA+ LWD++DGK   +  A
Sbjct:  204 EVRKIKYQISLYANISGIKWDYD-EGEILKGEVNVPSKNQTRR------------FCIDPLDYDEFDVANALWDLMDGKEPTLTAA 276
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig701.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSZ0_ECTSI3.280e-10476.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4N5F9_9STRA6.710e-637.21Kinetochore protein Spc24 n=1 Tax=Odontella aurita... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..129
NoneNo IPR availableGENE3D3.30.160.570Ncd80 complex, Spc24 subunitcoord: 134..211
e-value: 4.0E-19
score: 70.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig701contigP-littoralis_Contig701:2759..6651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig701.3.1mRNA_P-littoralis_Contig701.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig701 2725..6855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig701.3.1 ID=prot_P-littoralis_Contig701.3.1|Name=mRNA_P-littoralis_Contig701.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MGSATMEEMRVIINNDMPGMYSRMQGEDDILKVLELEGAMELECERRDTD
ARVMIRNAIDRLEQQQRAIVEPSEQAFVAKVRGVEHERAQAASHIQEQAE
EAAARERDIERMQEAVEKTQAEIENTVDAHIVEMPRVQNSIGLYANITGI
KWNYETEGEITAGWLIPPETGAGARAREGDGRAVVQGFQFDAAGKDDFEV
AHKLWDIIDGKTRAMVEA*
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