mRNA_P-littoralis_Contig700.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: D8LIS5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS5_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 5.030e-128 Identity = 234/370 (63.24%), Postives = 262/370 (70.81%), Query Frame = 1
Query: 346 GGTSTAWTCQSCSADNCTNGDVTR-SDGHNSSSSGGNACYLCCQPRQQERRLSAVETEYRSFDDREGNGTGAGGGYS-EKG--QXXXXXXXRRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPV 1443
GG + AWTC +CSA N D T GH + G C +C QPR++ R + + G G+ G S E G + RRV VTLAQIRGLEEPPEPTLTPGEW VEAKALARGDEA PCPICRE+FRGESQ+ILSCSHVFHKACLS+FEKFLR QERSCPLCRKVDYQK+AT+QGAVAWRQ+CARRLQCAYRRHRARR+YR LLRRHY AG G+TLRRREFLSGQAA+TAGKLA ALEDRGD IDRLFGEFDRSLAFSR+VFGP S TS+ P + XXXXXXXXXXXXX S++ R WKEAW+KAG+R EDECPICMC M+P+
Sbjct: 96 GGRTAAWTCHACSAQNYAMDDDTHPGQGHGIAEEAGQRCSVCVQPRRRWRLPGGEDGDI--------GGLGSDGRSSCEDGVHEGEEQHQPRRVAVTLAQIRGLEEPPEPTLTPGEWRAVEAKALARGDEAAPCPICRESFRGESQVILSCSHVFHKACLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARRLQCAYRRHRARRQYRGLLRRHYGAGLGDTLRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLAFSRQVFGPAS--TSTDPLTATTATXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXVTPSKERRVVVWKEAWVKAGERAEDECPICMCPMQPI 445
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A6G0WX15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX15_9STRA) HSP 1 Score: 218 bits (556), Expect = 7.430e-62 Identity = 131/360 (36.39%), Postives = 179/360 (49.72%), Query Frame = 1
Query: 607 RRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDY 1686
RR+ +TLAQ +GL + P P L+ +W EAKA RGD A PC ICRE F ++++ILSCSH+FH CL++FE+FLR +R CPLCRK +YQKR TKQG +R QCA ++Q RR AR+ Y LL Y +G G+ RR+ F + + + + ++ A++ R D+ID L EFD+S++ SR+V S+ T++S S +G + W EA KA R E ECPIC+ ++ + + LLSCSHV H CL+AFE FNIYE+HLCPVCR Y
Sbjct: 98 RRIKLTLAQKKGLVQAPPPKLSQNQWEECEAKAEERGDTAHPCSICREPFGLDAKVILSCSHMFHHNCLASFERFLRTNQRVCPLCRKQNYQKRLTKQGERIYRMQCAVKVQACVRRFLARKRYPQLLNEFYKSGRGSPSRRKTFYATKLSSISSRIVRAIDAREDSIDALLAEFDKSMSLSRQVLNGESSTTTAS---SCDGL--------------------------------------------MTVDKWHEALRKAVLRDEKECPICINLIDSAT------------------------------------------KPVTLLSCSHVLHTDCLDAFESFNIYEIHLCPVCRSHY 368
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A024U460_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U460_9STRA) HSP 1 Score: 209 bits (531), Expect = 3.780e-58 Identity = 129/362 (35.64%), Postives = 173/362 (47.79%), Query Frame = 1
Query: 607 RRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDYKS 1692
RR +TLAQ +GL + P P L+ +W EAKA RGD PC ICRE F ++ILSC+H+FH+ CL++FE+FLR +R CPLCRK +YQKR TKQG ++R QC ++Q R ARR + LLR+++ AG G+ RR+ F + + + + ++ A+E R D+ID L FD+SL SR VF P NG+ ++ + W + KA R E ECPIC S++ + + LLSCSHV H CL AFE FNIYEVHLCPVCR Y+S
Sbjct: 122 RRHKLTLAQKKGLVQAPPPKLSQNQWEDCEAKAEERGDTVHPCSICREPFGLAPKVILSCTHMFHQNCLASFERFLRTNQRVCPLCRKQNYQKRHTKQGEQSFRIQCTIKIQSFVRGFIARRRFPSLLRQYFKAGLGSPTRRQAFYASKISNLSDRIVCAIEAREDSIDALLASFDKSLTLSRHVFRPDQG-----------------------------------------NGAAAGNLMTQDK--------WNDTLRKALVRDEKECPICYNSIDCFTT-----------------------------------------KPIALLSCSHVLHADCLHAFETFNIYEVHLCPVCRAKYES 393
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: T0QW99_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW99_SAPDV) HSP 1 Score: 206 bits (525), Expect = 1.420e-57 Identity = 128/362 (35.36%), Postives = 166/362 (45.86%), Query Frame = 1
Query: 607 RRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDYKS 1692
RR +TLAQ +GL P P L +W VE +A ARGD PC ICRE F ++++LSCSH+FH CL++FE+FLR +R CPLCRK +Y+K+AT+ G +R CARRLQ R ARR Y LL +Y G+G+ RR F + + + + ++ A++ R D+ID L EFD S++ SR +F NG E + W A KA R E ECPIC+ +M + LLSCSHV H CL AFE FNIYEVHLCPVCR Y+S
Sbjct: 103 RRPRLTLAQKKGLVPGPPPRLNNNQWEDVEQQAEARGDAEYPCSICREPFGVHAKVLLSCSHMFHHTCLTSFERFLRTTDRVCPLCRKQNYEKKATQSGEAHFRSICARRLQARIRGWLARRRYTSLLAHYYKQGYGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIF----------------------------------------------NGE--------NNQETAKGNAWPNALAKATARNEAECPICLNAMSAKAV--------------------------------------------TLLSCSHVLHAECLVAFESFNIYEVHLCPVCRGHYES 366
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A067C9I3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9I3_SAPPC) HSP 1 Score: 176 bits (447), Expect = 3.790e-46 Identity = 127/380 (33.42%), Postives = 164/380 (43.16%), Query Frame = 1
Query: 607 RRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKR----ATKQGAVAWR--------------QQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDYKS 1692
RR +TLAQ +GL P P L +W VE +A ARGD PC ICRE F +++LSCSHVFH+ACL++FE+FLR +R CPLCRK +Y+K+ A + A + R C Q R ARR Y LL +Y G G+ RR F + + + + ++ A++ R D+ID L EFD S++ SR +F S T+ ET+ A W A KA R E ECPIC+ +M + LLSCSHV H CL AFE FNIYEVHLCPVCR Y+S
Sbjct: 102 RRPRLTLAQKKGLMPGPPPRLNNNQWEDVEQQAEARGDAVYPCSICREPFGVSPKVLLSCSHVFHQACLTSFERFLRTTDRVCPLCRKQNYEKKPHEPANRSIAASARVGFRCDDASPKTLSHLCD--AQARIRGWLARRRYPSLLAHYYKQGNGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIF---SGETNQ------------------------------------------------ETANGKVASQWTTALAKATARNEAECPICLNAMSAKAV--------------------------------------------TLLSCSHVLHAECLVAFESFNIYEVHLCPVCRGHYES 384
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A8K1C7G8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G8_PYTOL) HSP 1 Score: 170 bits (431), Expect = 3.800e-44 Identity = 88/183 (48.09%), Postives = 117/183 (63.93%), Query Frame = 1
Query: 649 EPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSP 1197
E P P L+ +W E +AL RGD PC ICRE+F + Q+ILSCSH+FH AC+ +FE+FLR ++R CPLCRK +YQKRAT +GAV R +CA R+Q +R R RR L + Y G G+ +RRR FL+ + KT +L A+ R D+ID L EFD++L+ SR+VF P T P
Sbjct: 99 EAPPPKLSRDDWERCENQALERGDVNHPCSICRESFGVQEQVILSCSHMFHLACIQSFERFLRTKQRVCPLCRKDNYQKRATVKGAVIHRDKCALRIQTMFRGFRERRRLDSLWHQFYRQGKGDPVRRRRFLANRIGKTTDRLVGAMRARDDSIDALLAEFDKTLSLSRQVFDPSQPQTDDDP 281
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A6A3MY24_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MY24_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.800e-44 Identity = 90/193 (46.63%), Postives = 122/193 (63.21%), Query Frame = 1
Query: 619 VTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSP 1197
+TLAQ RGL + P P LT EW E +A ARGD PC ICRE+F + Q+ILSCSH+FH AC+++FE+FLR +R CPLCRK +YQKR T + R A+R+Q R ARR+ L ++ Y++G G+ +RRR F + + KT +L A+ R D+ID L EFD+SL+ SR VF + T + P
Sbjct: 128 LTLAQKRGLVKRPPPKLTRDEWEDCEQQAEARGDTQHPCSICRESFGVKEQVILSCSHMFHLACITSFERFLRTNQRVCPLCRKQNYQKRNTTMASAFHRDYSAKRIQAVLRGFLARRQAAGLWQKFYSSGKGDPIRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVFQDNAPETETDP 320
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: W4GXZ0_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXZ0_9STRA) HSP 1 Score: 169 bits (428), Expect = 5.960e-44 Identity = 87/186 (46.77%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 607 RRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVF 1164
RR ++LAQ +GL + P P L+ +W EAKA RGD PC ICRE+F + ++ILSCSH+FH CL++FE+FLR +R CPLCRK +YQKR T QG +R QCA ++Q R + ARR + LLR+++ +G G+ RR+EF + + + + ++ A+E R D+ID L FD+SL SR VF
Sbjct: 113 RRSKLSLAQKKGLVQAPPPKLSQNQWEDCEAKAEERGDTMHPCSICRESFGVQPKVILSCSHMFHHNCLASFERFLRTNQRVCPLCRKQNYQKRHTNQGERGYRIQCAVKIQTFVRGYFARRRFPALLRQYFKSGNGSPRRRQEFYASKISNISDRIVDAIEAREDSIDALLATFDKSLTLSRHVF 298
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: A0A7S1CAV5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAV5_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.150e-41 Identity = 127/373 (34.05%), Postives = 164/373 (43.97%), Query Frame = 1
Query: 619 VTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATP----------------CPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSMEPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDYK 1689
+TLAQ GL P P +T +W V + AR A C IC E ++LSCSH+FHKACL +FE+F R +ER+CP+CR +Y+KR T+ GA CA LQ +R HR R + R +Y AG G+ RRR F + + ++ + +L AL D DA+D LF + D + SRE F A + + XXXXXXXXXXXX S D P V A W A A +R ECPIC+ K R +LLSCSHVFH C+ AFE F+ Y+ CPVCRQ Y+
Sbjct: 9 MTLAQRLGLVPAPAPEMTTQQWQEVARASEARLAAAXXXXXXXXXXXXXXXGGSCAICLERLGMAEALLLSCSHIFHKACLESFERFSRARERTCPMCRAANYEKRPTRVGAKRHVHACATVLQARWRGHRTRVAFAEQRRAYYAAGKGDPARRRRFFAERMSEVSTRLEDALADEDDALDALFAQLDADVEASREAFRAHGRAVAHHHDRHRDAADXXXXXXXXXXXXXXXX-------SGDVAPHPGHASSLDRLVPSVSAEQWAAAEAAAVERAVTECPICIADFSL------------------------------------------KPRSTVLLSCSHVFHATCIAAFESFSPYDAPACPVCRQHYR 332
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Match: UPI001CF593DF (RING finger protein 32-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF593DF) HSP 1 Score: 154 bits (388), Expect = 3.560e-38 Identity = 113/375 (30.13%), Postives = 163/375 (43.47%), Query Frame = 1
Query: 571 SEKGQXXXXXXXRRVTVTLAQIRGLEEPPEPTLTPGEWSIVEAKALARGDEATPCPICRETFRGESQIILSCSHVFHKACLSAFEKFLRVQERSCPLCRKVDYQKRATKQGAVAWRQQCARRLQCAYRRHRARREYRVLLRRHYNAGFGNTLRRREFLSGQAAKTAGKLAVALEDRGDAIDRLFGEFDRSLAFSREVFGPVSAATSSSPPGSLEGRXXXXXXXXXXXXXDSHLQHPLPSSSRDSNGSPQSTVLFSETSEKVRARTWKEAWIKAGDRGEDECPICMCSM--EPVSAGNGXXXXXXXXXXXXXXXXXXGEXXXXXXXRCQRRGDGGKQRDRLLLSCSHVFHKACLEAFEGFNIYEVHLCPVCRQDYK 1689
+E G+ + ++LAQ GL E PE L+ EW V+ K+ +R D A PC IC+E F + Q++LSCSHVFH+ACL AFEKF +SCP+CRK YQ+R +GA R +CA R+Q A+R R+ Y+ L + R++F + + +L ++E R +D L E D+S+A SR + G++EG +ET W ++A R +CPIC+ + E V N R +LLSCSHVFH CL+AFE F++ + H+CPVCR Y+
Sbjct: 74 NESGKQEYNLDPKPAPLSLAQKMGLIEAPELLLSEKEWKEVKEKSNSRQDSALPCVICKEDFGLQQQVLLSCSHVFHRACLEAFEKFSG--RKSCPMCRKEQYQRRIIHEGAREHRLKCATRIQAAWRGFIVRQWYKKL---RQTVPPKDPKLRKKFYEDKFQNISDRLLQSMEARNQRVDDLLLEIDQSIAASRHTMRQID--------GNIEG-------------------------------------TMAETH-------WDHVQLQAVQRAVSDCPICIMPLGEEGVHLSN------------------------------------NPSRPTVLLSCSHVFHATCLQAFEEFSLDKHHVCPVCRSLYE 355 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig700.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig700.5.1 >prot_P-littoralis_Contig700.5.1 ID=prot_P-littoralis_Contig700.5.1|Name=mRNA_P-littoralis_Contig700.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=571bp HNKSQQKAEGSSSGQLAGGSSRTLLRRRRPLHHRTLDEVSERVLDAAALQback to top mRNA from alignment at P-littoralis_Contig700:28935..33216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig700.5.1 ID=mRNA_P-littoralis_Contig700.5.1|Name=mRNA_P-littoralis_Contig700.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4282bp|location=Sequence derived from alignment at P-littoralis_Contig700:28935..33216- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig700:28935..33216- >mRNA_P-littoralis_Contig700.5.1 ID=mRNA_P-littoralis_Contig700.5.1|Name=mRNA_P-littoralis_Contig700.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1713bp|location=Sequence derived from alignment at P-littoralis_Contig700:28935..33216- (Pylaiella littoralis U1_48)back to top |