mRNA_P-littoralis_Contig70.74.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE) HSP 1 Score: 137 bits (345), Expect = 9.310e-38 Identity = 67/96 (69.79%), Postives = 79/96 (82.29%), Query Frame = 1
Query: 292 APLCSFRCSRSKEAKVLGYHKALRALRRIVQKAGGDPNMVGLHSLRIGAATTLAAGGQIPDRIFQRKGRWKEGSRTFKLYTRNSLEDIEILSRKLA 579
APLCS RC RSK KV GY KAL ALR+IV++AGGDP VGLHSLRIGA TTLAAGG +PDR QR+GRWKEGS T K+ TRN++ D++++SRKLA
Sbjct: 11 APLCSCRCRRSKTIKVWGYSKALSALRQIVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQREGRWKEGSNTLKICTRNNMVDVDMVSRKLA 106
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.110e-37 Identity = 81/157 (51.59%), Postives = 101/157 (64.33%), Query Frame = 1
Query: 136 ITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQRRLRGEFMRFIAC------SAPLCSFRCSRSKEAKVLGYHKALRALRRIVQKAGGDPNMVGLHSLRIGAATTLAAGGQIPDRIFQRKGRWKEGSRTFKLYTRNSLEDIEILSRKLARGR 588
+ + RG D S C V +AR S + + +AC APLCSFRC RSK KV GY KAL A +IV+KAGG+P VGLHSLRIGAATTLAAGG +PDRI Q +GRWKEGS TFK+YTRN++ D++++SRKLA+G+
Sbjct: 137 VRVRFRGHKGDQSEKGACVTRVREVARGASSQIGA--GGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYSKALSA--QIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQGEGRWKEGSGTFKIYTRNNMVDVDMVSRKLAKGK 289
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.120e-37 Identity = 84/157 (53.50%), Postives = 101/157 (64.33%), Query Frame = 1
Query: 136 ITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQRRLRGEFMRFIAC------SAPLCSFRCSRSKEAKVLGYHKALRALRRIVQKAGGDPNMVGLHSLRIGAATTLAAGGQIPDRIFQRKGRWKEGSRTFKLYTRNSLEDIEILSRKLARGR 588
+ + RG D S C V +AR S + + +AC APLCSFRC RSK KV GY KAL ALR+IV KAGGDP VGLHSLRIGAATTLAAGG +PDRI Q +GRWKE S TFK+YTRN++ DI+++SRKLA+G+
Sbjct: 754 VRVRFRGHKGDQSEKGACVTRVREVARGASSQIGA--GGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQSEGRWKEASGTFKIYTRNNMVDIDMVSRKLAKGK 908
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 2.490e-18 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 289 SAPLCSFRCSRSKEAKVLGYHKALRALRRIVQKAGGDPNMVGLHSLRIGAATTLAAGGQIPDRIFQRKGRWKEGSRTFKLYTRNSLEDIEILSRKL 576
SAPL S+R +E KVL Y +ALRALR IV+++G +P LHSLRIG A+TLAAGG + +R+ QR+GRWK S +K+YT N+ ED + +SR L
Sbjct: 348 SAPLSSYRSG--QEVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQREGRWK--SDAYKVYTVNNSEDSQRVSRTL 439
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5KQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 2.700e-17 Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 AIEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
+ EVT VAD LL F P AFAPRGA G IP+ATHL LMA AFITIARRG+VDDP AA +A VD + SF +V+D VE+
Sbjct: 103 SFEVTDAVADMLLNFRGFDPVAFAPRGAGGERIPIATHLSLMAGAFITIARRGIVDDPRLAAAVKARVDRVEASFQAVIDDVER 186
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5JW95_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW95_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 2.110e-16 Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 AIEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
+ EVT VAD LL F P AFAPRGA G IP+ATHL LMA AFITIARRG+VDDP AA +A VD + SF +V+D VE+
Sbjct: 225 SFEVTDAVADMLLNFRGFDPVAFAPRGAGGERIPIATHLSLMAGAFITIARRGIVDDPRLAAAVKARVDRVEASFQAVIDDVER 308
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5K1N1_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N1_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 4.890e-16 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 AIEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
+ EVT EVAD LL F P+AFAPRGA G IP+ATHL LMA AFITIARRG+VD+P AA RA VD + SF + + VE+
Sbjct: 199 SFEVTDEVADMLLNFRGFDPAAFAPRGAGGERIPIATHLALMAGAFITIARRGIVDEPRLAAASRAQVDRVEASFQAAIADVER 282
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5KC28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC28_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.140e-14 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 1 AIEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
+IEVT EVA LL F P+AFAPRGA G IP+ATH LMA AFITIARRG+ D+P AA +A VD + SF + + VE+
Sbjct: 199 SIEVTDEVAGMLLNFRGFDPAAFAPRGAGGERIPIATHFGLMARAFITIARRGIADEPRLAAASKAQVDRVEASFQAAIADVER 282
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5K1K7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K7_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.060e-13 Identity = 47/83 (56.63%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 4 IEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
IEVT EVA LL F P+AFAPRGA G IP+ATH LMA AFITIARRG+ D+P AA +A VD SF + + VE+
Sbjct: 255 IEVTDEVAGMLLNFRGFDPAAFAPRGAGGERIPIATHFGLMAGAFITIARRGIADEPRLAAASKAQVDRFEASFQAAIADVER 337
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Match: A0A6H5KF68_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF68_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 8.460e-13 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 AIEVTSEVADSLLRCCDFRPSAFAPRGAVGI-IPMATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQ 249
+IEVT EV LL F P+AFAPRGA G P+ATH LMA FITIARRG+ D+P AA +A VD + SF + + VE+
Sbjct: 55 SIEVTDEVVGMLLNFRGFDPAAFAPRGAGGERFPIATHFGLMAGVFITIARRGIADEPRLAAASKAQVDRVEASFQAAIADVER 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig70.74.1 >prot_P-littoralis_Contig70.74.1 ID=prot_P-littoralis_Contig70.74.1|Name=mRNA_P-littoralis_Contig70.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp MATHLRLMAEAFITIARRGVVDDPSTAATCRAPVDTIARSFVSVVDLVEQback to top mRNA from alignment at P-littoralis_Contig70:372664..373669+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig70.74.1 ID=mRNA_P-littoralis_Contig70.74.1|Name=mRNA_P-littoralis_Contig70.74.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1006bp|location=Sequence derived from alignment at P-littoralis_Contig70:372664..373669+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig70:372664..373669+ >mRNA_P-littoralis_Contig70.74.1 ID=mRNA_P-littoralis_Contig70.74.1|Name=mRNA_P-littoralis_Contig70.74.1|organism=Pylaiella littoralis U1_48|type=CDS|length=498bp|location=Sequence derived from alignment at P-littoralis_Contig70:372664..373669+ (Pylaiella littoralis U1_48)back to top |