mRNA_P-littoralis_Contig7.170.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 1.740e-147 Identity = 235/330 (71.21%), Postives = 239/330 (72.42%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT---------------KIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMG--------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRGVAIH*SVRRRDGGL 741
PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT KIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMG RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR V ++ + D G+
Sbjct: 494 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLEQARREQQSSPAEGPAAEGRAAARRQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRVVWLY--IEAYDDGM 821
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 342 bits (876), Expect = 6.990e-108 Identity = 184/288 (63.89%), Postives = 192/288 (66.67%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT---------------KIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMG--------------------------RQ------------------------------------------RCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCE 615
PRTA VIMTVGKQ DGYWTSDRMCAQLPAA+A FEL+NGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEK ALRVFEDDNG+ KIFLPKT QKK+KGRK GTGLDKK+YPVGT+VT GSPLLGL+KGGEQMLKEMG RQ RCCMERVFSDL AFKAQLNKV+QIFK AGHVCIFLPKYHPELNAIE YWGYVKH LRLHCE
Sbjct: 546 PRTAVVIMTVGKQQDGYWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYPVGTKVTHGSPLLGLSKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKAENAASRQAIAAFNKGGEERERVLEQARXXXXXXXXXXXXXXXXXXXXXXRCCMERVFSDLRAFKAQLNKVEQIFKKAGHVCIFLPKYHPELNAIELYWGYVKHYLRLHCE 833
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 335 bits (858), Expect = 5.810e-107 Identity = 189/313 (60.38%), Postives = 207/313 (66.13%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT---------------KIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGRQRC-------------CM--------------------ERVF-----------------SDLGAFK-AQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRGVAIH*SVRRRDGGL 741
P+TAAVIM VG+QHDGYWTSD MCAQLPA IAM EL++GPHRQGVFIFDNSTGHN YD DALLAH I+LAPGGEK ALRVFED +GK KIFLPKTE QKK K RK GT LDK K+PVGT+V SPLLGLNKGGEQML+EMG R C ERV S G +K A LNKV+QIFK+AGHVCIFLPKYHPELNAIERYWG +KHVLRLHCE SLTHML+IL A+SGVPL+HIRAWSR V ++ V D GL
Sbjct: 361 PQTAAVIMPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEKRGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQAWWEQQKFFHRGSRGSGRGCWKEAALNKVEQIFKEAGHVCIFLPKYHPELNAIERYWGSIKHVLRLHCEISLTHMLEILRGAMSGVPLDHIRAWSRVVWLY--VEAYDDGL 671
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: D7FZS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS5_ECTSI) HSP 1 Score: 243 bits (621), Expect = 4.780e-78 Identity = 122/159 (76.73%), Postives = 129/159 (81.13%), Query Frame = 1
Query: 22 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT---------------KIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGRQRCCMERV 453
MTVGKQHDGYWTSDRMCAQLPAAIA FEL++GPHRQGV IFDNSTGHN YDDDALLAHK+SLAPGGEK ALRVFEDDNG+T KIFLPKTEAQ+K KGRKFGTGLDKK+YP GT+ T GSPLLGLNKGGEQMLK MG R ER
Sbjct: 1 MTVGKQHDGYWTSDRMCAQLPAAIATFELTHGPHRQGVSIFDNSTGHNTYDDDALLAHKMSLAPGGEKTALRVFEDDNGRTVHPTPQLGGTLLTDKKIFLPKTEAQEKTKGRKFGTGLDKKQYPFGTKATPGSPLLGLNKGGEQMLKGMGLWRLDGERA 159
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 238 bits (606), Expect = 1.550e-69 Identity = 142/347 (40.92%), Postives = 180/347 (51.87%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGK---------------TKIFLPKTE----AQKKM------------KGRKFGTGLDKKKYPVGTRVTSGSP-LLGLNKGGEQMLKEMG--------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRGVAIH*SVRRRDGGL 741
P TAAVIMTVG+ DGYW RM Q+P IA+ EL++ PHRQ V +FDNSTGH+A+ AL+ ++L PGG + ALR FEDD G T +F PKTE A+KK K +K G L K K + T + L+GL KGG+Q+L EMG R+RCC+ RV S+L AF+ +LN V+++FK GH+C+FLPKYHPELN+IERYWGY+KH+LRLHCEYSL HML++LP ALSGVP IRAWSR ++ + D GL
Sbjct: 353 PSTAAVIMTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLWEGEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLY--IEAYDEGL 697
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 230 bits (587), Expect = 7.750e-69 Identity = 140/337 (41.54%), Postives = 174/337 (51.63%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGK---------------TKIFLPKT---------EAQKK---MKGRKFGTGLDKKKYPVGTRV-TSG--SPLLGLNKGGEQMLKEMG---------------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 696
PRT AVIMTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G T ++ KT EA KK K K G+ L + G +V T+G S L+G KGG+Q+L EMG R+RCC+ +VF++L AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGY KH+LRL CEYSL HML+ILP ALSGVPL +R WSR
Sbjct: 84 PRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGD--FNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSR 418
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.690e-67 Identity = 129/249 (51.81%), Postives = 145/249 (58.23%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMG----------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFL 537
P TAAVIMTVG+QHD YWTSDRMCA+LPA IAM EL++GPHRQ V IFDNSTGHNAY +DALLAHKI++APGGEK ALRVFEDDNG T +KK K RK GT LDKKK+ VGT+V +GSPLLG+NKG EQML+EMG RQRCC RVFSDL A K QLNKV++IFK AGH +L
Sbjct: 353 PWTAAVIMTVGQQHDRYWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNT--------VEKKQKERKNGTALDKKKFSVGTKVVAGSPLLGVNKGAEQMLREMGLWRLGGERKEGLLQICKKCKANNAASRQEITAFNKRGGGEGEGSRASAAGAAEFFHRGAHYSGRGGWNATRQRCCAYRVFSDLRALKEQLNKVEEIFKKAGHAVAWL 593
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 234 bits (597), Expect = 2.090e-67 Identity = 141/335 (42.09%), Postives = 172/335 (51.34%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGK---------------TKIFLPKT---------EAQKK---MKGRKFGTGLDKKKYPVGTRVTSG-SPLLGLNKGGEQMLKEMG---------------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 696
PRT AVIMTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G T ++ KT EA KK K KFG+ L K R T S L+G KGG+Q+L EMG R+RCC+ +VF++L AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGYVKH+LRL CEYSL HML+ILP ALSGVPL +R WSR
Sbjct: 517 PRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSR 851
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 234 bits (596), Expect = 1.210e-66 Identity = 137/334 (41.02%), Postives = 172/334 (51.50%), Query Frame = 1
Query: 1 PRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNG---------------KTKIFLPKTEAQKKM---------KGRKFGTGLDKKKYPVGTRVTSG---SPLLGLNKGGEQMLKEMG---------------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 696
P T AVIMTVG+ DG+W ++RMC Q+P IA+ EL++ PHR V +FDNSTGH AY+ AL+A I+ PGG +A L F DD G K +++ KT Q K K +K G + ++ GT + + S L+G KGG+QML EMG R RCC+ RVF++L AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGYVKH+LRLHCEYSL HMLKILP ALSGVPL +R WSR
Sbjct: 927 PSTGAVIMTVGQNQDGFWNNERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAEEEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSR 1260
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 191 bits (486), Expect = 4.050e-54 Identity = 118/319 (36.99%), Postives = 158/319 (49.53%), Query Frame = 1
Query: 4 RTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKT---------------KIFLPKTEAQ---KKMKGRKFGTGLDKKKYPVGT---RVTSGSPLLGLNKGGEQMLKEMG-------------------------------------------------------------------RQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 696
R+A +I+ VGK DGYW S+R+C QL A A FE+S P RQ + +FDNSTGHNAY DAL A I +PGGE+ R FE NG+T F KTEA+ KK G++ G +P+GT R TS L+G+ KG +++L++MG +RCC +R+ S++ AFK Q+N+V+++F+ AGH CIFL KYHPELNAIER+WGY K + R C+YS+ +L LP LS V L R W+R
Sbjct: 193 RSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEY-NGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGV------FPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWAR 504 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.170.1 >prot_P-littoralis_Contig7.170.1 ID=prot_P-littoralis_Contig7.170.1|Name=mRNA_P-littoralis_Contig7.170.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYback to top mRNA from alignment at P-littoralis_Contig7:696156..697185+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.170.1 ID=mRNA_P-littoralis_Contig7.170.1|Name=mRNA_P-littoralis_Contig7.170.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1030bp|location=Sequence derived from alignment at P-littoralis_Contig7:696156..697185+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:696156..697185+ >mRNA_P-littoralis_Contig7.170.1 ID=mRNA_P-littoralis_Contig7.170.1|Name=mRNA_P-littoralis_Contig7.170.1|organism=Pylaiella littoralis U1_48|type=CDS|length=693bp|location=Sequence derived from alignment at P-littoralis_Contig7:696156..697185+ (Pylaiella littoralis U1_48)back to top |