prot_P-littoralis_Contig7.89.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.89.5
Unique Nameprot_P-littoralis_Contig7.89.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length211
Homology
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 9.350e-79
Identity = 152/174 (87.36%), Postives = 161/174 (92.53%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 174
            MSSIFEAYDEEFLALT+DIG+NISHL TYETD GKKRTQL H+DAL+GQAGDLLKQMEIEVRSTQ+AA+KK+LQGK++SYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFA GGASQEQRDRLLQTTD      XXXXXXXXXXXXXXXXXXX   ELGRNREKIGEVHDKVR
Sbjct:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGRNREKIGEVHDKVR 174          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.640e-70
Identity = 117/129 (90.70%), Postives = 124/129 (96.12%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTD 129
            MSSIFEAYDEEFLALT DIG+NISHL TYETD GKKRTQL HVDAL+GQAGDLLKQMEIEVRSTQ+AATKK+LQGK++SYKKTLQSLRGDYQRAV+KQEREGLLGGREAAFA GGASQEQRDRLLQTTD
Sbjct:    1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.260e-45
Identity = 91/177 (51.41%), Postives = 116/177 (65.54%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLG---GREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 174
            M+SIFE+Y EEF+ LT D+  NISH +TYET+   +  QL   + LLGQA DLLKQME+E RST +A T++DLQ K++SYKK+L S+R DYQ AVEK ER+GL+    G E  ++  GAS+E R+RLL+T D+L+ QS                   IT ELGRNRE I   H KVR
Sbjct:    1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVR 177          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: W7U7B0_9STRA (Vesicle transport through interaction with t-snares 1a n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7B0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.090e-19
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKV 173
            M+ IFE+Y++EF AL  D    +S+L TYET   K ++ L      + Q   L+KQM++EVRS  +A TK  L  K+ +Y++ L  ++ D  RA E++E++ LLG      A GG S  QR RLL+T++RL  Q+                   I  EL  NREKI  +  KV
Sbjct:   40 MTDIFESYEDEFRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEVRSL-DAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLG------AGGGVSMVQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQSIRGKV 205          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A482S7X4_9ARCH (V-SNARE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X4_9ARCH)

HSP 1 Score: 89.0 bits (219), Expect = 2.610e-19
Identity = 56/128 (43.75%), Postives = 81/128 (63.28%), Query Frame = 0
Query:    3 SIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDR 130
            SIF+AYD EF +LT+DI  N++ L   ++D     + +  +DALL QA DL+KQME+E+RS  + AT+K L  K++ YKKT Q+L+ D++RA E+ ER  L+G +         S E R RLL   D+
Sbjct:    2 SIFDAYDAEFASLTKDINKNLNDL---KSDPQNGSSLIKMIDALLSQAQDLIKQMEVELRS-HDTATRKSLTEKVNVYKKTRQNLKSDFERAKEESERSALIGEK---------SGEHRQRLLNANDK 116          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A835ZAQ6_9STRA (V-SNARE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.480e-11
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = 0
Query:    2 SSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 174
            S +FE+Y EE L L     + + HL    +     R  L      LG+A DLL+Q+E+E RS  +AAT+ DLQ ++ ++K +L SLR     A E+++    + G + A A       QR R+L   D L  Q+                   +T ELGRNRE I   H KV+
Sbjct:    3 SPMFESYVEEILTLA----AEVRHLLQTGSVGDVDRAVLQ-----LGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRT----ASERRQLVSRVDGSDPAAAAA-----QRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVK 157          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A7S0SA22_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SA22_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 1.060e-9
Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQE----REGLLGGREAAFAPGGASQEQRDRLLQTTDRLD 132
            MS IF+ Y++EFL  T  I  N + L + + DD  K  +L  V++ + +A  L+++M++E RS    A K  L   +  YK  L  L+ + Q A +       R  LL G E        S  QR+R+LQTTDRLD
Sbjct:   29 MSHIFDGYEKEFLEFTASISRNTASLPSLDGDD--KSAKLAVVESDIAEAEALIRRMDLEARSLPLPAVKTPLLSTLRDYKAELARLKRESQLAAKAASGAANRNALLAGAELDDLGAPTSSSQRERMLQTTDRLD 162          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: C1MQ00_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQ00_MICPC)

HSP 1 Score: 64.3 bits (155), Expect = 5.700e-9
Identity = 54/177 (30.51%), Postives = 79/177 (44.63%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQ---RAVEKQE-REGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKV 173
            MS IF+ Y+ EFL  T  I    + L +   D   K  ++  VDA + +A  L+++M++E RS ++   K  +  K+  YK  LQ L+ + Q   RA+     R  LL G E        S  QR+R+LQ+T RLD                      I  +L R RE I    + V
Sbjct:    1 MSHIFDGYEREFLEYTASINRATASLPSL--DGAAKSQKIAEVDAEVAEAEALVRRMDLEARSLRDPTVKTPMLAKLRDYKSELQRLKRESQVAARAISSSNARSQLLAGAELDDMGAPTSSSQRERMLQSTARLDSTGDRIREGKKSLLETEELGVSILQDLHRQRETISSARENV 175          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A0E9NRV5_SAICN (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NRV5_SAICN)

HSP 1 Score: 60.1 bits (144), Expect = 1.740e-7
Identity = 39/134 (29.10%), Postives = 71/134 (52.99%), Query Frame = 0
Query:    2 SSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQS 135
            S +F  Y+ +F  +  D+   ++ L     +   +++ ++    LL +  +++ QME+EV +  +  T+  +  ++  +KK LQ  + + ++     +RE L G R A+  PG   QEQRDRLL  TDRL+  S
Sbjct:   10 SELFVGYESDFTLILADLSRTLTSLPPLRGE--PRKSAISSASRLLEEGQEIIAQMELEVLNIPSV-TRGKVNARLREHKKELQEKKTELRKLSATSDRELLFGDRGASPIPGSEGQEQRDRLLTATDRLERSS 140          
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A2P6P2U1_ROSCH (V-SNARE domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P2U1_ROSCH)

HSP 1 Score: 58.2 bits (139), Expect = 8.640e-7
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLN-HVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQ----EREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQS 135
            MS +FE Y+  +  L+ ++ +  +  T     DG++R Q N  + A L +A DL+++M++E RS Q  + K  L  K+  YK  L +L+   +R    +     RE LLG  EA      AS +QR RLL TT+R++  S
Sbjct:    9 MSDVFEGYERHYCELSVNLSNKCTPTTIV---DGEQRKQRNAEIKAALDEADDLIRKMDLEARSLQ-PSVKTTLLPKVREYKTDLNNLKSLVKRITTTEISHLAREELLGSGEADTLT--ASNDQRGRLLMTTERINQSS 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FI03_ECTSI9.350e-7987.36Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5L3U6_9PHAE2.640e-7090.70t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CJ32_9STRA8.260e-4551.41Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
W7U7B0_9STRA1.090e-1937.57Vesicle transport through interaction with t-snare... [more]
A0A482S7X4_9ARCH2.610e-1943.75V-SNARE domain-containing protein n=1 Tax=archaeon... [more]
A0A835ZAQ6_9STRA3.480e-1133.53V-SNARE domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S0SA22_9CHLO1.060e-936.03Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
C1MQ00_MICPC5.700e-930.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A0E9NRV5_SAICN1.740e-729.10t-SNARE coiled-coil homology domain-containing pro... [more]
A0A2P6P2U1_ROSCH8.640e-734.29V-SNARE domain-containing protein n=1 Tax=Rosa chi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..101
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableGENE3D1.20.5.110coord: 118..183
e-value: 5.2E-11
score: 44.6
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 1..174
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT V-SNARE 13coord: 1..174
NoneNo IPR availableCDDcd15862SNARE_Vti1coord: 128..174
e-value: 2.17545E-11
score: 55.2277
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 12..93
e-value: 2.0E-14
score: 53.7
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 1..101
e-value: 1.1E-19
score: 72.4
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 6..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:441151..446791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.89.5mRNA_P-littoralis_Contig7.89.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 440808..446903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.89.5 ID=prot_P-littoralis_Contig7.89.5|Name=mRNA_P-littoralis_Contig7.89.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQA
GDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQER
EGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSRRLEDSKRTMMEIED
TAMEITLELGRNREKIGEVHDKVRYWHEHERKILLTYNIDIDMFNSSTPL
PVLHLTFLAM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007705Vesicle_trsprt_v-SNARE_N
IPR038407v-SNARE_N_sf
IPR010989SNARE