mRNA_P-littoralis_Contig7.89.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.89.5
Unique NamemRNA_P-littoralis_Contig7.89.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.310e-76
Identity = 152/174 (87.36%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 634
            MSSIFEAYDEEFLALT+DIG+NISHL TYETD GKKRTQL H+DAL+GQAGDLLKQMEIEVRSTQ+AA+KK+LQGK++SYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFA GGASQEQRDRLLQTTD      XXXXXXXXXXXXXXXXXXX   ELGRNREKIGEVHDKVR
Sbjct:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGRNREKIGEVHDKVR 174
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 3.200e-68
Identity = 117/129 (90.70%), Postives = 124/129 (96.12%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTD 499
            MSSIFEAYDEEFLALT DIG+NISHL TYETD GKKRTQL HVDAL+GQAGDLLKQMEIEVRSTQ+AATKK+LQGK++SYKKTLQSLRGDYQRAV+KQEREGLLGGREAAFA GGASQEQRDRLLQTTD
Sbjct:    1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.200e-43
Identity = 91/177 (51.41%), Postives = 116/177 (65.54%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLG---GREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 634
            M+SIFE+Y EEF+ LT D+  NISH +TYET+   +  QL   + LLGQA DLLKQME+E RST +A T++DLQ K++SYKK+L S+R DYQ AVEK ER+GL+    G E  ++  GAS+E R+RLL+T D+L+ QS                   IT ELGRNRE I   H KVR
Sbjct:    1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVR 177
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BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: W7U7B0_9STRA (Vesicle transport through interaction with t-snares 1a n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7B0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.550e-18
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKV 631
            M+ IFE+Y++EF AL  D    +S+L TYET   K ++ L      + Q   L+KQM++EVRS  +A TK  L  K+ +Y++ L  ++ D  RA E++E++ LLG      A GG S  QR RLL+T++RL  Q+                   I  EL  NREKI  +  KV
Sbjct:   40 MTDIFESYEDEFRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEVRSL-DAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLG------AGGGVSMVQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQSIRGKV 205
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A482S7X4_9ARCH (V-SNARE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X4_9ARCH)

HSP 1 Score: 89.4 bits (220), Expect = 3.000e-18
Identity = 56/128 (43.75%), Postives = 81/128 (63.28%), Query Frame = 2 
Query:  119 SIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDR 502
            SIF+AYD EF +LT+DI  N++ L   ++D     + +  +DALL QA DL+KQME+E+RS  + AT+K L  K++ YKKT Q+L+ D++RA E+ ER  L+G +         S E R RLL   D+
Sbjct:    2 SIFDAYDAEFASLTKDINKNLNDL---KSDPQNGSSLIKMIDALLSQAQDLIKQMEVELRS-HDTATRKSLTEKVNVYKKTRQNLKSDFERAKEESERSALIGEK---------SGEHRQRLLNANDK 116
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A835ZAQ6_9STRA (V-SNARE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.700e-10
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = 2 
Query:  116 SSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKVR 634
            S +FE+Y EE L L     + + HL    +     R  L      LG+A DLL+Q+E+E RS  +AAT+ DLQ ++ ++K +L SLR     A E+++    + G + A A       QR R+L   D L  Q+                   +T ELGRNRE I   H KV+
Sbjct:    3 SPMFESYVEEILTLA----AEVRHLLQTGSVGDVDRAVLQ-----LGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRT----ASERRQLVSRVDGSDPAAAAA-----QRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVK 157
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A7S0SA22_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SA22_9CHLO)

HSP 1 Score: 67.0 bits (162), Expect = 4.960e-9
Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQE----REGLLGGREAAFAPGGASQEQRDRLLQTTDRLD 508
            MS IF+ Y++EFL  T  I  N + L + + DD  K  +L  V++ + +A  L+++M++E RS    A K  L   +  YK  L  L+ + Q A +       R  LL G E        S  QR+R+LQTTDRLD
Sbjct:   29 MSHIFDGYEKEFLEFTASISRNTASLPSLDGDD--KSAKLAVVESDIAEAEALIRRMDLEARSLPLPAVKTPLLSTLRDYKAELARLKRESQLAAKAASGAANRNALLAGAELDDLGAPTSSSQRERMLQTTDRLD 162
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BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: C1MQ00_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQ00_MICPC)

HSP 1 Score: 64.7 bits (156), Expect = 2.350e-8
Identity = 54/177 (30.51%), Postives = 79/177 (44.63%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQ---RAVEKQE-REGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSXXXXXXXXXXXXXXXXXXXITLELGRNREKIGEVHDKV 631
            MS IF+ Y+ EFL  T  I    + L +   D   K  ++  VDA + +A  L+++M++E RS ++   K  +  K+  YK  LQ L+ + Q   RA+     R  LL G E        S  QR+R+LQ+T RLD                      I  +L R RE I    + V
Sbjct:    1 MSHIFDGYEREFLEYTASINRATASLPSL--DGAAKSQKIAEVDAEVAEAEALVRRMDLEARSLRDPTVKTPMLAKLRDYKSELQRLKRESQVAARAISSSNARSQLLAGAELDDMGAPTSSSQRERMLQSTARLDSTGDRIREGKKSLLETEELGVSILQDLHRQRETISSARENV 175
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A0E9NRV5_SAICN (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NRV5_SAICN)

HSP 1 Score: 60.8 bits (146), Expect = 4.380e-7
Identity = 40/136 (29.41%), Postives = 72/136 (52.94%), Query Frame = 2 
Query:  110 VMSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQS 517
            V S +F  Y+ +F  +  D+   ++ L     +   +++ ++    LL +  +++ QME+EV +  +  T+  +  ++  +KK LQ  + + ++     +RE L G R A+  PG   QEQRDRLL  TDRL+  S
Sbjct:    8 VGSELFVGYESDFTLILADLSRTLTSLPPLRGE--PRKSAISSASRLLEEGQEIIAQMELEVLNIPSV-TRGKVNARLREHKKELQEKKTELRKLSATSDRELLFGDRGASPIPGSEGQEQRDRLLTATDRLERSS 140
[Close]
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Match: A0A2P6P2U1_ROSCH (V-SNARE domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P2U1_ROSCH)

HSP 1 Score: 58.5 bits (140), Expect = 2.730e-6
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 2 
Query:  113 MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLN-HVDALLGQAGDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQ----EREGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQS 517
            MS +FE Y+  +  L+ ++ +  +  T     DG++R Q N  + A L +A DL+++M++E RS Q  + K  L  K+  YK  L +L+   +R    +     RE LLG  EA      AS +QR RLL TT+R++  S
Sbjct:    9 MSDVFEGYERHYCELSVNLSNKCTPTTIV---DGEQRKQRNAEIKAALDEADDLIRKMDLEARSLQ-PSVKTTLLPKVREYKTDLNNLKSLVKRITTTEISHLAREELLGSGEADTLT--ASNDQRGRLLMTTERINQSS 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.89.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FI03_ECTSI1.310e-7687.36Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5L3U6_9PHAE3.200e-6890.70t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CJ32_9STRA5.200e-4351.41Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
W7U7B0_9STRA1.550e-1837.57Vesicle transport through interaction with t-snare... [more]
A0A482S7X4_9ARCH3.000e-1843.75V-SNARE domain-containing protein n=1 Tax=archaeon... [more]
A0A835ZAQ6_9STRA1.700e-1033.53V-SNARE domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S0SA22_9CHLO4.960e-936.03Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
C1MQ00_MICPC2.350e-830.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A0E9NRV5_SAICN4.380e-729.41t-SNARE coiled-coil homology domain-containing pro... [more]
A0A2P6P2U1_ROSCH2.730e-634.29V-SNARE domain-containing protein n=1 Tax=Rosa chi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:440808..446903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI03
Preferred nameVTI1A
PFAMsV-SNARE,V-SNARE_C
Model size1088
Max annot lvl2759|Eukaryota
KEGG koko:K08493,ko:K08494,ko:K18749
KEGG Pathwayko04130,ko04138,map04130,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0002576,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005767,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007030,GO:0007033,GO:0007034,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008200,GO:0008283,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016248,GO:0016482,GO:0017081,GO:0019869,GO:0022406,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030173,GO:0030424,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031091,GO:0031093,GO:0031201,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031901,GO:0031902,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032010,GO:0032501,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0034613,GO:0034774,GO:0036477,GO:0042144,GO:0042147,GO:0042175,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043679,GO:0044237,GO:0044248,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045324,GO:0045335,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048280,GO:0048284,GO:0048471,GO:0050789,GO:0050879,GO:0050881,GO:0050882,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055037,GO:0055038,GO:0060205,GO:0060341,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090161,GO:0090174,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1903076,GO:1903827,GO:1904375,GO:1905475
Exons5
Evalue1.53e-79
EggNOG OGsKOG1666@1|root,KOG1666@2759|Eukaryota
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-12_006560.1
Descriptionvesicle fusion with Golgi apparatus
Cds size633
COG categoryS
BRITEko00000,ko00001,ko03019,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.89.5prot_P-littoralis_Contig7.89.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 441151..446791 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791451.6539276-UTR-P-littoralis_Contig7:440807..4411501680791451.6539276-UTR-P-littoralis_Contig7:440807..441150Pylaiella littoralis U1_48UTRP-littoralis_Contig7 440808..441150 -
1680791451.73037-UTR-P-littoralis_Contig7:446791..4469031680791451.73037-UTR-P-littoralis_Contig7:446791..446903Pylaiella littoralis U1_48UTRP-littoralis_Contig7 446792..446903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791451.66976-CDS-P-littoralis_Contig7:441150..4413291680791451.66976-CDS-P-littoralis_Contig7:441150..441329Pylaiella littoralis U1_48CDSP-littoralis_Contig7 441151..441329 -
1680791451.680038-CDS-P-littoralis_Contig7:441730..4418571680791451.680038-CDS-P-littoralis_Contig7:441730..441857Pylaiella littoralis U1_48CDSP-littoralis_Contig7 441731..441857 -
1680791451.6899927-CDS-P-littoralis_Contig7:442447..4425501680791451.6899927-CDS-P-littoralis_Contig7:442447..442550Pylaiella littoralis U1_48CDSP-littoralis_Contig7 442448..442550 -
1680791451.704702-CDS-P-littoralis_Contig7:446260..4463841680791451.704702-CDS-P-littoralis_Contig7:446260..446384Pylaiella littoralis U1_48CDSP-littoralis_Contig7 446261..446384 -
1680791451.7189348-CDS-P-littoralis_Contig7:446691..4467911680791451.7189348-CDS-P-littoralis_Contig7:446691..446791Pylaiella littoralis U1_48CDSP-littoralis_Contig7 446692..446791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.89.5

>prot_P-littoralis_Contig7.89.5 ID=prot_P-littoralis_Contig7.89.5|Name=mRNA_P-littoralis_Contig7.89.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MSSIFEAYDEEFLALTEDIGSNISHLTTYETDDGKKRTQLNHVDALLGQA
GDLLKQMEIEVRSTQNAATKKDLQGKMSSYKKTLQSLRGDYQRAVEKQER
EGLLGGREAAFAPGGASQEQRDRLLQTTDRLDGQSRRLEDSKRTMMEIED
TAMEITLELGRNREKIGEVHDKVRYWHEHERKILLTYNIDIDMFNSSTPL
PVLHLTFLAM*
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mRNA from alignment at P-littoralis_Contig7:440808..446903-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.89.5 ID=mRNA_P-littoralis_Contig7.89.5|Name=mRNA_P-littoralis_Contig7.89.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=6096bp|location=Sequence derived from alignment at P-littoralis_Contig7:440808..446903- (Pylaiella littoralis U1_48)
TCGGCCAGAGCGACACCTTCGATCACCCGGTAATGTACTAACCTTCATCG
AGAAGCAATTGTGAACTGCGACCACAATCTACCCTGGCAGTTTTGGCTCC
CCACGGAAAGTCATGTCGTCGATTTTCGAGGCATACGATGAGGAGTTTTT
AGCTCTCACCGAGGACATCGGCAGCAACATCAGCCACCTGACCACCTACG
AGACGGATGACGGTGAGGTGGAGGCTGTCTCTCCTCTATCATACGTTCAC
TACTGCTGTTTTCATTAAGCCTCCTTCAATATCTTTTCCCTTGTTGGTCG
CGGAAGACCATGTTCTTTCCCGAAATGCCGCGACAAGTTTGCCCCAGAGC
AATCCGCCATCGTTGCTCCTTTGCCCTGCTCGTGCCGCTGTCCGCCTGCA
TCGCTTCTTCCTCCGCTCTTGGCTGTGTAGAACCCATTCTCCATCTTCTT
CAACCGCATGGTAAACCTGCTACTGACTGCTGCAGGGTTCTGGCTACGAC
AACGCTTTATTGTTTTCAGGTAAAAAGCGAACGCAGCTGAACCACGTCGA
TGCCCTGTTGGGGCAGGCGGGGGACCTGCTCAAGCAGATGGAGATCGAGG
TCCGGAGCACGCAGAATGCCGCCACCAAGAAAGATCTACAGGGGTGAGTA
TTGGAGGCCCGCGTCCGCGCAAGCTTACAGACAACACTACTATGGTGCCA
AGTAGGCCCGTTCTTCATCCGGAGTTAACTTGAAGCTTTAACGACGTGTC
CGAGCGAAAGTGTGTTCTCTCTTGACCCCTTTTCTGAAAAATACTTCGAA
AAGTAGGATAATACTTCGAAGTAGGACGTATCAAAGAATCAAGAGAGAAC
GGATGGAGAGAACACAGCACCGCTCTGCCTGACCGGGTCTAACAGCGATG
ACAATCGAGGAGAGATTTCTGATAATATGCTGCATCTCTCTGTGTCAGTA
CCCATCGTCATATGCATATCATACAAGATCCCCTTTCAGAGTGAGCTAAT
GAAAGAGGGCATAATAAAGAGTGCGACAGGGGGTGATTCAAGAGAGAAAC
AGAATCAATGCTAGCTTCTTCAGCTTTCTTCTGCAGTGTGGAGAGCGTCC
CAAACTCGAGTCGAACTTCAAAAAAAGCCACCCGTTTCTTTGTTCGTGTT
ACATGCAGACCCTACAGTAGCGCGACGACAATGAACATAGCGGCTGCCGG
CATAAAAAAAGGACAGACGGTGAAGAGTTCGGCGATGATCGGACTCAGTC
TGCTTGTCGGTCGGGAGCAGGTTGGTCGGAAAGATTAAACAAATGAAAGT
TGTAACCCCCCCGTCTTCCAGAGGCTGAATTTTGAGCCCAGCAGCCCCCT
AGAACCTACGAGCCCCGATTTTTTGACTCGCTCTTTACTCTTCCTACCCA
GGGACAGCAGACAGCAAGTACACGGCGTAGAGCGTAGACGGAAGTTATAC
CTCTCAAACCCGCACCCGTGGTCGACAGTGACATGCAGATGAGGGAATGT
CTGTTGTATAGCAGTTGAAACGTCTGTGTATGGCGGAGGGGGAGGGGGGA
GGGGGGAAGGGTTAATCTGTTTTTGGGAGGCACCACACGCTTTTTTTCTT
TTTTGCCCGCGTCATTTCTCGCGTCCTCTTTCACGCCGCCACCAGCTCGC
ACCCATAACCCATAACCCTCAACCAGCCAATCCAACACTCGTATACATGT
GTAGATACGGCTACTCGCTCGCCGAAGCGCCGGAAGCATCTGGTGCCTAC
ATAAAGTCTACGTCTATCGGTTCGACAGATCCGCAGGTCACACAACTACA
TGCAGCCCGTGCCTCCTCACATTATTGCGCAAACACACACTCTGTCTGTC
GTACAGCAGTACAGCGGTAGCATCAGTTCATGACGATAGAGATCGAGTGC
GGCAAAAAAAGTGCTATGGGGTGATGGGCGAACAGAGCTTGTTGTGCACG
TGCATGATGATGACTTATCTACACTATACTTGCGGCGGCGACGGCGGTCG
TGTAGACATGTATAAAGCGACACCGCTCTCTTCGTTCTTTGAAAGGATGA
ATGAGAATAGATCGATACCGCCCGTGTGGCTTGTGTGTTTATGTATGGAG
TATGGAGCGATGAGTGAACAGAGCATATGTACACGTGAGCGACTTGTGCT
TGTGTACAGCACCATCAGCAAGCAACAGACAGTAGACAGCGACGACGTAT
CCTGCTGAGCATGTATGTGCCACCGAGAGCTACATGTATGGACGTAAGCG
AACGTGCACGATTTGATGGATGGGCGAACAGAGCTTGGTGTTTATGCATG
TATGTGGGAGACCTGTGTGTAGAGTGTACAGCAGAAGTATGACACAGCAA
AAGCAGCGGCATTTGTAGCTGCTCGCTGACCCAAACAGTCCAACGCTGCC
AGACAGTAGTCCAAAGTCTAAATTCCGAAGCTGTGACATCGCCACGCTGC
TCCGCTGTCGTGCTGACATTTTATTTAATAGGGCCTGCTCACCGATAAAC
CAATCACTAGCCGGTGCTGCTAACGTCGGTCTGTTCACCGATCAACAGCT
GTTGCTTTGTTACTGTTCACTAAACAACTGTCGGGCCTGACGTTTTGCCG
TTGGGCCGTTCTCTGAACCGCTCACAAAAAAACAGTCAGCTGTCATCTCC
GGCCATTTTTGACCCTAGGAAATTGCGAAGAAGCAAAAGAAGGATTTATA
AATCTGTAATAAGTCTTACAAGTATGAAAACTCATATCGCAGGTCTCGTG
CGACCTGACCCACAAGTACGACGTGACCCCGGCTAACATTATCACGACGA
ACGCTGATTCATGCGTTTCAAAGCTTAGTGCGCGATTCAATTGCGACTAC
GACTAGCCCGCGACGGTGCTGTTGGTGACAGGCTAGAGTTGGGAGTAGGC
AGGTCCGGCGTGCGGCCTCCCTCGCACGGCGTGCCCCCAGTACGGCGTCG
CGGGGGCGGGGAGTCCTTCCCCAAACCGTCCCATGCCGGGCGCGAACCAC
GTGGTGTAATGGCGGTTGATCTACGGTGCTCGCGGCGCCGGTGGCTGCTG
CTGCTGCTGCTTTAGCTTCTGCTCCCTGTTGCGCTGCTGTTGGTCAGCAC
TCGATGAGGACATCCTGCCTGTCCTTGCGGGTCGGCTGCGGTGTGCGAGT
ACTTACGGGTCGGCCGTGGTGTGCGAGTGCATGCTCTCCTCTCTTGTGCA
TTTTTGTGGCGACCTGGCGACCACCCGAGGCAAGGCGACAGTCTCCGCCT
CGACGAGACCAACTTTTTTTTGTGAACTCTTATTTTGATTTTTGCCCAAC
TCCCGGTCTCTTTGCCCAATTCGCGGTCATTTTTCATGAGTTTGCCATCT
ATTTTGGCGTATAGACCGTTCGTCCTCACCACATGATGTGCCGTGTGTCA
CGCAAGACGTCTCCCGAATTGTCTTGTTGAGCCTGACACCCTCAAGGGAG
CTGCAACGATATCGCGATCGCGACCGAGGGTTCTGGTTCGAATATGATGC
GCTGAAAAACGAAAAAAAGTAATGAATTTCATCATTTCACCCAGTCACGT
CAAGTGTTTTATTTTTATCTTGCTGCTCTGACTCTCAGACTGCCGGTTGA
GAACAGGCCTTTTACATAGCCACTAGACGATCACGGCAGTGGGAAGGGGA
AACGAAGGGAAAAGGGCAGGGAAGAGTAAAACGCGCGCATGGAAGTGAAT
AGAGGCAGGTATCGAGACAGCGAGAAGTGAAAGAGGGGCGACTCGTGGGT
TGTCCTTCTCGTGGGTATTGTTACAGTAGTAATCGATCGTTTTGGCTCTC
TTCTTAGGTTTGTTCAGACAGACCGTTGCCTACGTGAAACACGGTACTAT
GATCATGGCACACTACTGCTGTAGGCACGACGTTCGGGTTGACAACATCC
GAATAAAAAATATGAAAAATCTGCTTTCAAAAACAAGTATCCAACGAATG
TGCATGGCGATTAATTCAGGACTATATATCTTTCGCGTCTGAGGTTTGTA
CTGTAGTTCCGGACAGCTGTAGACCGACGTCGGATAGTAAAACGCACACC
TGACAGAAGTTGTGTTACAGAAGCAGTTCGATATCGGCATCTCTCCAGTT
TCCTCGAGGTTTTTGTCTCGGCTTACTCGCACTGGCCTCCATAGACCCAA
CAGCACTTACGCTCATCTTCAATTTCACCTCAGCGAGGGTGTTGTTGGGA
TTTCATTTCCTGTAGTATATACCACATACGACATGAAGGGCAGCAGACAT
CCCACCAGCAGTTCGTTCCTTTTGCTTCAAAATTCCCTCCATATCTGCCT
CCTTGCTGCTGTTTTGCCACTGTACGATATTGTCGCGGCAAATTCGTCAA
CAGCAAGATGTCAAGCTACAAGAAGACGCTGCAGTCGTTACGAGGGGACT
ACCAGCGGGCGGTCGAGAAGCAAGAACGGGAAGGCCTCCTGGGAGGGAGA
GAAGCGGTGAGGCCCGGTCGGTTCGTGGGTGTAGTATTATTTGCCCGCCT
ACTCACGCGTCGCCACCCCCCCTAATGTGTGCGCTGTATTACATAGGGCA
CGAAACTTGCGTGTGGAGGCAAAAGGCATCACATTCGTGGTGCAAACTCA
TGATGTTATTTTAAGTATTTCGCGAAGGTCTGTCGTGTATCTGAGAGCGT
GCGGTTGGTATGATAGCCACAGGTGCAAACAAGCGGAGATCGCTGCTGTA
GGCCTCTCTGTTTCGGCTGAGTTGGGGCATTTTTTATCACCCTTTTCAAG
TGCCGTATGCCGAGCGAGCCGCATTATTTCCGGACTTGACGGACACTTGC
CTGCGCTTGCTCGGCACCAGCGCTACATGAAGCACTCTTCCAACCTACCG
CACACAGTACGACCCACGTGCGCGTTTATGTTTATTCATGATATGTTGAC
CGTGTGTGTTCGTGTCTCTCTTGGCGTCTGGAATTGGCTGGTGGCGAGTC
TGTCGCATTGTCGTATATCCATCTAACGTGTTTCCCGTATTTGTATGCGT
TTGTCGACCGCCCTCTGTTCGCTGCGGAACTGGCTTTGTAACGCAGGCGT
TTGCACCGGGAGGCGCCTCGCAGGAGCAGCGGGATCGACTGTTGCAAACG
ACCGACCGCTTGGATGGGCAGAGCCGCCGATTAGAGGACAGCAAAAGAAC
CATGATGGAGATTGAGGACACTGGTGAGTCGAGACATGGGCAGGTGGGGG
GGAAGGTTGGAAACTGTTTTCCCGATACTTACGCCGGTTGACACCGAACA
TATGGCCGTTTAAGAAGTTGCTGTTGTCACCAATAATTTCGTTGACGATA
GATGTTGTCGTTGTTTTCGCGATGAGCTTCAGCGATGGCCGTTAAAAGTT
TATTTATTTTGTCAAGCTTTGGAACGTGATGTCTCTTTCCAGTAGAATGC
CGCAGTCTTACTGGGCGTTAATGTTGTCTCTGAATTGCGGCGCCCTTGCG
TTTTTCCTCACCAATATTCGCTCACGCGGCGCGTATTTATTCCGTCGGTC
GCTCTTGTGCCTGGGGTCTTCTCGCGTTGGCTGCGCTCGTTTGTTCTTTT
TTTCTTTTTTTTCAATCGCCGCAGCGATGGAAATCACGTTGGAGCTAGGA
AGGAACCGAGAAAAAATCGGGGAGGTGCACGACAAGGTGAGATATTGGCA
CGAACACGAGAGAAAAATATTACTGACTTACAATATCGATATCGATATGT
TCAACAGCTCAACACCATTACCGGTTTTGCATCTAACATTTCTGGCTATG
TAGTCTTCGTGCTGTAAAGGGTCGATGTTGGTTCGGCAGCGTGTCGTGTG
CACTAGTAAACTTTTCCGTATGGTAGTATGACACCACTCTAAGTCTGATT
TCCGAAGCTTCGTATTGAACTCCACAGCAAGAAAAGTGTTGCGCCAGAAT
GTGTTGCGATGGAAAGATGTCGTCAACGAGCCTTTCCGAAAACTAGTCGC
TTGATGTTTCGCGGCGCCCTCTCCGTTGCGGAGCAATCGAGTTTGCACCA
GTCTTCAATCGAGTTGGCACCGTCTTCGTTGCGGGGCAATCGAGTTGGCA
CCATCTTCGTTGCGGGGCAATCGAGCTTCAACAGAATAAACCCAGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:440808..446903-

>mRNA_P-littoralis_Contig7.89.5 ID=mRNA_P-littoralis_Contig7.89.5|Name=mRNA_P-littoralis_Contig7.89.5|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig7:440808..446903- (Pylaiella littoralis U1_48)
ATGTCGTCGATTTTCGAGGCATACGATGAGGAGTTTTTAGCTCTCACCGA
GGACATCGGCAGCAACATCAGCCACCTGACCACCTACGAGACGGATGACG
GTAAAAAGCGAACGCAGCTGAACCACGTCGATGCCCTGTTGGGGCAGGCG
GGGGACCTGCTCAAGCAGATGGAGATCGAGGTCCGGAGCACGCAGAATGC
CGCCACCAAGAAAGATCTACAGGGCAAGATGTCAAGCTACAAGAAGACGC
TGCAGTCGTTACGAGGGGACTACCAGCGGGCGGTCGAGAAGCAAGAACGG
GAAGGCCTCCTGGGAGGGAGAGAAGCGGCGTTTGCACCGGGAGGCGCCTC
GCAGGAGCAGCGGGATCGACTGTTGCAAACGACCGACCGCTTGGATGGGC
AGAGCCGCCGATTAGAGGACAGCAAAAGAACCATGATGGAGATTGAGGAC
ACTGCGATGGAAATCACGTTGGAGCTAGGAAGGAACCGAGAAAAAATCGG
GGAGGTGCACGACAAGGTGAGATATTGGCACGAACACGAGAGAAAAATAT
TACTGACTTACAATATCGATATCGATATGTTCAACAGCTCAACACCATTA
CCGGTTTTGCATCTAACATTTCTGGCTATGTAG
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