mRNA_P-littoralis_Contig7.47.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig7.47.2
Unique Name	mRNA_P-littoralis_Contig7.47.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 8.720e-95
Identity = 197/382 (51.57%), Postives = 226/382 (59.16%), Query Frame = 1

Query:   46 MSSYDDIPMDFGDDDEANDFLTGQLAALGIDEDLELSGDEEESDDRASAA--------VRPSAASPEPLFALXXXXXXXXXXXXXXXXXXXXXXXXEDWGEAPQ----PVSEVVNNKTPQ--RTSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRGRPQKQXXXXXX-----------HGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAGEDVMTPRDPPRKRAQGNGRDRDRVYDRRADGGSATRAGRNMGTWVGPVA-AXXXXXXXXXXXXKRARA 1113
            MS++DD  MDFG DD+ +DFLTG+LAALGIDEDLELSG EEE D+RA A           P   +P P  A                         +DWG  P     P    +  +      T     T  + PAA GG+ G  +EDGEL++++++PL  SRGR Q+                   G R   K   +ARG NVTIKECA W+CERLGEPKYYLMC+VVSTIGY KTR LLE VQETQ+  GGMPTADGSRKRTAGGVFFTLLK HMEP++LKELYADE+RVKKE DRARRAANKRKA AALAGEDVMTPR+PPR R                    ATRAGR+MG W GP A A            KRARA
Sbjct:    1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSNKPPGIVAPSPQQA----SASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGR-GTAVEDGELVQMIDQPLRTSRGREQRSARDSGRGGGXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQE-TGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXX-----------XXXXXATRAGRDMGKWAGPTAGAGGRDGCGDAVAAKRARA 365

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.390e-11
Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 1

Query:  619 LGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELY-ADEVRVKKENDRARRAANKRKALAALAGEDVMTPR 933
            L E    L+   +  IG K  +RLL+RV ETQ+D GG+ TADGSRKRT GGVFF LL+  M P   K+L  AD  R K+E +  R+   KR       G D    R
Sbjct:   95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRD-GGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDAKRGR 199

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A0N8CKZ4_9CRUS (Phosphorylated adapter RNA export protein n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CKZ4_9CRUS)

HSP 1 Score: 67.8 bits (164), Expect = 2.360e-8
Identity = 60/191 (31.41%), Postives = 97/191 (50.79%), Query Frame = 1

Query:  343 EVVNNKTPQR-----TSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRGRPQKQXXXXXXHGARNSKKNGRRARGGNVTIKECATWM------CERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHME--PAKLKELYADEVRVKKENDRARRA 876
            E ++ KT QR        + +    +P  V   V E  E  + L+  +K L+ SR R  +Q      +  +  +   +  R  ++T+ E +T +        +L E K  L+ RVV  IG + T +L    QET+ D GG+  ADGSR+RT GGVF  LL++H E    K++E+++ E + K+++ R  RA
Sbjct:  137 EDIDEKTEQRIRKKIADLDEKYGGETPVIVEDPVAEDFE--QSLQKTQKLLT-SRKRKMEQRETQSPNTVQRPRSRTQLRRVEDLTVTESSTVLEVAQDITVKLHEEKMDLILRVVEIIGKELTIQLFRETQETEND-GGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREVFSQETKAKEQHKRTIRA 323

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: E9GGD8_DAPPU (Phosphorylated adapter RNA export protein n=3 Tax=Daphnia TaxID=6668 RepID=E9GGD8_DAPPU)

HSP 1 Score: 67.0 bits (162), Expect = 4.320e-8
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 1

Query:  583 TIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHME--PAKLKELYADEVRVKKENDRARRA 876
            T+ E A  +  +L E K  L+ RVV  +G + T +L    QET+ D GG+  ADGSR+RT GGVF  LL++H E    K++E++++E + ++++ R  RA
Sbjct:  228 TVMEVAQDIALKLHEEKMDLILRVVEILGKEITIKLFYETQETEND-GGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREIFSEETKAREQHKRTLRA 326

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT)

HSP 1 Score: 65.9 bits (159), Expect = 5.900e-8
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 1

Query:  607 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK--HHMEPAKLKELYADEVRVKKENDRARRAA-NKRKALAAL 906
            + ERL E K+ L+   V  IG KK   L    ++ Q + GGM T +GSR+RT+GGVF TLLK  ++    ++KE++ D++ +KKE  + ++AA N+RK    L
Sbjct:  166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLN-GGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKEALKRKKAAYNQRKKARKL 267

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 62.8 bits (151), Expect = 3.810e-7
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  607 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK 792
            + ERL EPK +L+ RVV  +G  + R+LL   ++ +  AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  134 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVES-AGGLLTIDGSRRRTAGGVFFHLLK 194

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 63.2 bits (152), Expect = 5.130e-7
Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1

Query:  607 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK--HHMEPAKLKELYADEVRVKKE 855
            + ERL E K+ L+   V  IG KK   L +  +  Q  +GGM T +GSR+RT+GGVFFTLLK  ++    ++KE++ +++ +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQL-SGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A5B8MI43_9CHLO (Phosphorylated adapter RNA export protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MI43_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 5.930e-7
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 1

Query:  376 SAERRTEASSPAAVGGKVGEGIEDGELLELLEKPL-SASRGRPQKQXXXXXX---------HGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAG 912
            S E R  A   A+VG K G   ++  L +    P  + ++ RP  +               H   + + N  R+ G    IKE    +C++L EPK +LM +V+  +G      L+++V+  +++ GG   ADG+R+RT GGVF  LLK  +   +   ++ DE    KE  + R+A  +R   A  AG
Sbjct:   70 SLEERMNAELDASVGEKKGSRRQNSTLEDFFTSPKRTTAKARPYSKRAYSPRAIVSPPHKTHRVFSPRHNENRSTG--RFIKE----VCQKLNEPKQHLMRKVMEQVGKIFIMELVDQVERVEEE-GGQFVADGTRRRTKGGVFLNLLKAQVTKEQWDTIFEDE----KEAQKRRKAMKRRLRYAGEAG 247

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A8J2RPI4_9CRUS (Phosphorylated adapter RNA export protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RPI4_9CRUS)

HSP 1 Score: 63.2 bits (152), Expect = 7.410e-7
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 1

Query:  583 TIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEP--AKLKELYADEVRVKKENDRARRA 876
            T+ E A  +  +L E K  L+ R+V  +G +   +L    QET+ D GG+  A+GSR+RT GGVF  LL++H E    K++E++++E + K++  R  RA
Sbjct:  230 TVLEVAQDIALKLHEEKMELIIRIVEILGKEIAIKLFYETQETEND-GGIMIANGSRRRTPGGVFLYLLRNHEEIPLVKIREIFSEETKAKEQTKRTLRA 328

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A293M5C7_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M5C7_ORNER)

HSP 1 Score: 62.8 bits (151), Expect = 7.820e-7
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  607 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK 792
            + ERL EPK +L+ RVV  +G  + R+LL   ++ +  AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  223 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVES-AGGLLTIDGSRRRTAGGVFFHLLK 283

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHZ0_ECTSI	8.720e-95	51.57	Phosphorylated adapter RNA export protein n=2 Tax=...	[more]
A0A8J2X059_9STRA	5.390e-11	45.28	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A0N8CKZ4_9CRUS	2.360e-8	31.41	Phosphorylated adapter RNA export protein n=5 Tax=...	[more]
E9GGD8_DAPPU	4.320e-8	40.00	Phosphorylated adapter RNA export protein n=3 Tax=...	[more]
A0A7D9EF16_PARCT	5.900e-8	40.78	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A293N1Q8_ORNER	3.810e-7	53.23	Phosphorylated adapter RNA export protein (Fragmen...	[more]
UPI001069D661	5.130e-7	42.35	uncharacterized protein LOC114518314 n=1 Tax=Dendr...	[more]
A0A5B8MI43_9CHLO	5.930e-7	29.63	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A8J2RPI4_9CRUS	7.410e-7	38.00	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A293M5C7_ORNER	7.820e-7	53.23	Phosphorylated adapter RNA export protein (Fragmen...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig7	contig	P-littoralis_Contig7:203770..209539 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FHZ0
PFAMs	RNA_GG_bind
Model size	1920
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K14291
KEGG Pathway	ko03013,map03013
Hectar predicted targeting category	other localisation
Exons	3
Evalue	9.45e-99
EggNOG OGs	KOG3948@1\|root,KOG3948@2759\|Eukaryota
Ec32 ortholog description	Phosphorylated adapter RNA export protein, RNA-binding domain
Ec32 ortholog	Ec-12_006420.1
Description	snRNA export from nucleus
Cds size	1128
COG category	S
BRITE	ko00000,ko00001

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791449.509766-UTR-P-littoralis_Contig7:203769..204516	1680791449.509766-UTR-P-littoralis_Contig7:203769..204516	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig7 203770..204516 -
1680791449.5572667-UTR-P-littoralis_Contig7:209494..209539	1680791449.5572667-UTR-P-littoralis_Contig7:209494..209539	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig7 209495..209539 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791449.522793-CDS-P-littoralis_Contig7:204516..204975	1680791449.522793-CDS-P-littoralis_Contig7:204516..204975	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig7 204517..204975 -
1680791449.5343075-CDS-P-littoralis_Contig7:206879..207497	1680791449.5343075-CDS-P-littoralis_Contig7:206879..207497	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig7 206880..207497 -
1680791449.5459187-CDS-P-littoralis_Contig7:209443..209494	1680791449.5459187-CDS-P-littoralis_Contig7:209443..209494	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig7 209444..209494 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig7.47.2	prot_P-littoralis_Contig7.47.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig7 204517..209494 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig7:203770..209539-
coding sequence from alignment at P-littoralis_Contig7:203770..209539-

protein sequence of mRNA_P-littoralis_Contig7.47.2

>prot_P-littoralis_Contig7.47.2 ID=prot_P-littoralis_Contig7.47.2|Name=mRNA_P-littoralis_Contig7.47.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=376bp
MSSYDDIPMDFGDDDEANDFLTGQLAALGIDEDLELSGDEEESDDRASAA
VRPSAASPEPLFALAAASSLPPVRSATTPSAAAAAAAAEDWGEAPQPVSE
VVNNKTPQRTSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRG
RPQKQQQQQQQHGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLM
CRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKH
HMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAGEDVMTPRDPPR
KRAQGNGRDRDRVYDRRADGGSATRAGRNMGTWVGPVAAAGGGAADDVVA
AKRARASTTLSGDGEGGVAARTLLP*

mRNA from alignment at P-littoralis_Contig7:203770..209539-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig7.47.2 ID=mRNA_P-littoralis_Contig7.47.2|Name=mRNA_P-littoralis_Contig7.47.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5770bp|location=Sequence derived from alignment at P-littoralis_Contig7:203770..209539- (Pylaiella littoralis U1_48)
TCCGTGATAGCCCACCAGCCCACTGCTGCCGCTGTGGACAGCCCAATGTC
TAGCTATGACGACATCCCGATGGACTTCGGAGATGATGATGAGGCGGTGA
GCTCGAGGCCTCCCGCTGTACCGCTGTTGATCCATTTTTTTTTACTGCAA
ACAAAGACATACAGCATACAGCACATCATCATATCAACATATTTGATTAT
TTTCAATTTTCAATTTTCAAAGTTTCGCGTCCCCGCCTCCCTGCCGTAGC
ACCACGAGTTTACCACCCGATGAGAGGTAAGATTGTCGCAACATTACACG
ATGTGAACATAATACATATGTACATACATACGAGGCACACCCATAGAGTT
TCCATAACTCATCTGATGTCGACCAGCAGTCGCCGCTTGTTGGAGGTGAT
GAGGCCCAACAAGATAATTTGATAGTTTGGATGTTTGAAAGGGACGACTG
GGGAAGCTCGCAGAGATTCGAACACTGACTGATGAGACACACCATGTTTT
ATGTCGCCATATCTGGCCGTCCAAAGTAAAAGTAAAAGTTCGTCAACTTT
TTCAGATCAAGATCTATTTCACTGCCAATTCGTATGTGTCGTCCAAATGT
CGTCAAAATTTCTCAAATCGGACCAAAGTGGGCCAAATCGGTAAAAGTTG
GCCCAACCAACATCTAACCATCCCGGCAGTCGCTAATCTCTTGTTGGGAG
CGGCGAGATTACGATACACCACAACGCTTCAGCAAATAATACCAGCCACT
ACGCCATGGAATCTGAACGCAGCGAGCTGGTGAAAGCCTCTGCGCAACCC
TAGAGTCACTGTGCCAACACCTCTGCTGCTGGTACATGGCGGAAGCTCGC
AAGGCATGCAAAAAAAACATTGGATTGCTGTAGAGGCTCTTTGAAAGGTA
TGGGCTGACTTGCGCGTGACACCTCAGGCACAGCAGCAGTTGAAGAAAAA
GAGAACACCGCAACAAGCAGTCATGTTCTCGCTCCCTTCACCACCAATCA
TGATGAAATATTCTTAGTTACCACCTCTATCCACGCCATCCGTCAGCAGG
ACGTTGAGCTGACCGTGAGCATTCAATCAGCCGAGAGAAGCATCGCTGTG
TGTACCCGTATCGAACATCTGCTTGAGAATCATTCCCAGCGGTCAACAAT
ATGTGCTCTATTTTCAAGTATATGAAAAAGGGAGAAAAGGTGGTTTGTAT
TTCCAGCTTGGCCCGGAACTTCCGACAAACAAAAAAAACAATAGAATCAT
AACAGGAGACCAACTTTCGCCGCTTCTCGAACATCTACGAATTTGAAACG
AGATTCTTTACTCCATAACAGCGGGACAATATCTTCGAACAGTGAACATG
TGCCACCTAAATGTTGATCGACATTTGAGCAAACTTTAATTTTCGACGGC
CAGATATGGTTTCCATAAACGGGGGGTGTGATGGGCGCAATCGCGTCGAC
GAATGAAGCACTTCGAAATCTGTGGGACTCGCGATCTCACGATGCAGCAC
CCCGCCTTTTTATTCGGGATGCTTTGTCGTGTTCCAATTCCATTCGAGTC
ATCCGTCATATCATAAAAAAACACGAGGTTTTATATCACGGCAGCGTCTA
CACCTTTTGGTTTAATATATATATATATACTTGTATGATATGAAGCGGGC
GCACCAGCCGGGGCAGCTTTTTTTTTTCCTCCACCCACCTTCTGCCGTGC
TTGTCTTTTTTGCCTTTCAGCTTCATATCGCGGGAAGGGTTCAACGGTCC
CTTACCCTCGCCGAGTGCTGTTAAGCCGAACGTTCTTTTATATCGCGACA
CACAAGTACAGAGTCGGCATCATAGCCGTTTTCCTCTCCCAAGAACTTTT
GTGAGAAAAATAATACAAGGTCGTCTGGCTTCACTGGGATTCGAATTCAC
GTCCTAGGTATCAGTAGGCTTCGAGGCTGTCATACAGCATCACGGAACCA
CCGGGGCGACCGGCTTAGAAAAAAAGAAAAAGTGTGAATCTTGATCTTTC
ACTCACACTAGAAATCGTGCGTCTTCCGTTGACGCCCGACAGAACGACTT
CTTGACCGGCCAGCTTGCCGCGTTGGGCATCGATGAAGACCTCGAGCTTT
CGGGGGACGAGGAAGAAAGCGATGACCGTGCCTCTGCCGCCGTCCGCCCC
TCTGCTGCTTCACCTGAACCCCTATTCGCCCTGGCCGCGGCATCATCACT
ACCCCCGGTGCGATCCGCGACAACTCCTTCTGCTGCTGCCGCTGCGGCCG
CCGCCGAGGACTGGGGAGAAGCACCGCAACCCGTCTCCGAAGTCGTCAAC
AACAAAACTCCACAACGAACCTCAGCAGAAAGAAGGACCGAAGCATCTTC
GCCAGCCGCTGTGGGAGGAAAAGTTGGGGAAGGCATAGAAGATGGAGAAC
TGTTGGAACTGCTGGAGAAGCCCCTTAGTGCCTCCCGCGGCCGCCCACAG
AAGCAGCAGCAGCAGCAGCAGCAGCACGGGGCTCGGAATAGCAAAAAAAA
TGGGCGCAGGGCGCGAGGAGGTAACGTGACAATAAAGGAGTGCGCCACTT
GGATGTGCGAGCGTCTCGGTGAGCCCAAGTACTACCTCATGTGTCGAGTG
GTGTCGACCATCGGATACAAGAAAACGAGGCGCTTGCTGGAGAGAGTGCA
GGAGACACAGGTGAGGGTGCTACTTGCTGGCTTGGCTGATGAAAAACGGC
TGGAATTGCGATGAGAAAATATTTAACACCACTCTATTCTCGTTCCCAAC
GCGAAGGATCCACACCGATTTACGGTGGAGAGATGGTACTACTGCCTGTG
AGCAGCTTCGCGTTTGTGGGCGCCTCGACTGAAGCACGGAGATATATTAG
CTGCGACTCGCGCTGTCAACGACGCGGCCAATCGGAAACCTGCCGATTCG
CATGCCAGTTGACTCACATCCCACCTCGCCTACTTACTACGTGAGTTCGG
CTCGTTTGTCTTTTCAGTCAGGTAAGCGTCTCGCCAAGAATTGTGCTTCA
AGACTTGGCGGCCCCTAGTTATAGTCTGTAGACAGCGCGTGGGAGGGCAG
TGCCGGGTAGAAGACTAATAATCTGTGCACGCGATATCATGCGGTGGCTT
CGTGAGGCTTCGTGATTCTTGGTCGAGGTTACCAGAGCCTCACCATTTCG
AGTAGGAAAGTAGGTCTCAAAACTCATCTAGTCCCAGAAAAAAGTCGGCA
CAAATAGTTGGCACGCACGCTTCCCCCAGTTCGATTTCACCGAGTACCGC
CACCGCTGAGCAATGAAACCTTTGCCAGCATTCGCGTACAGTAGAGGACG
GAAATGGGAGTTTTTTTTTTTATCTTCGGGTCAAGATCCAGAAAAACAAC
CTTGCCGAATCAGTTACTGATCACTGTGTACCTATTACGCCAATACCGAA
CGTGGCGTGCTCATCAAGGGCTCTCCGAGAAACCCTTCAGTGTAGGCGTA
TTGCCTTGCCAACCTGGCCGCTGGCCGCTGGCCGTCACTCTTCAGGCGTG
CGAAAACAAACTTCATGTAGGACGACAGGATTAATGGAGTTGATGCCGAC
AGCGTGTCTTGGCGCGAACAGAGCAAAACCGACAGCTTTTGGACAGACGT
CCGAGAACACTACCTTCATTTATTCGCTCGATGCAGTACGTATCGTATGT
ATTAAGCTAAAACCTGGAAGGATGAGAGTCCGTCAACTGCTTGCCGTCGG
CAAGGCGTTGGCACGTGGGGTCATTCCATCAACAGGGAGAAGCATCGGTC
GAGGGTGTGATTTGCGGGTCAAACACAGAATCTGGCCTTTTCTTTTAGAT
CCTAAAAAAACGACACCTTTTTTTACATACCGTCATGTAAAGAACTGATG
TTCAACACACAGCGCTGCTATCATACCCCTGTTGATTGAATGACCCCACG
CGCTAGCCGAACGCCCTGCCGACGCCGAGCAGAGAGTGGAAATCCTATCC
TCCCCCAGGTCTTAGCTTCAAACGTGCTCGATCGATCGATTGAGTGCAGT
TGAATACGGTGTCCTCGGGTCTCTGAAAGACCGTCTGTTTGCTCTGTTCG
TGTCAAGACAGGCTGTCGGCATCTCATGCTTCAAAGCCTGCGGTCAAGCG
CGCTTGTGTCTTTTTTTCGCACGCTTAAAACAACGACCGCCGCCGGCCAG
CGACCAGGTTGGCAATGCGATGCACCCAGAGTTGATCGGAGCCCATGCTG
AGCATGGCACGTTCGATATTTATTGTGGAATGGGTAACTGTTGTCCCCAG
AGTGCGATGGGATGGGCCGCACCCCTTGTGTTCCACATATTTAGATCACG
AGTCCAATGATATGTGTGCACCATAGGCACGGACCACCTAAAATATTGAT
TTCATACAAGTATGCGGAGACCAGAAGGTCGGGGAGGGGTGAAAAAAAAA
TAAAGATAACATCTGGGTTCCATGTATATGATACAACGGTTTTTATCCTC
TACTCTTCTCAAACACTGAAGATACCCCTCACCACACCACCCCTTCCCCC
CACCATCACCCCTTCCACCCATGCACGAATCGCCAACTTAAAAAATATAC
CAAATTTAACGGAGCAGGACGCAGGAGGCATGCCGACCGCGGACGGCAGT
CGGAAACGCACCGCGGGGGGCGTTTTCTTCACCCTGCTCAAGCACCACAT
GGAACCGGCAAAGCTCAAGGAGCTCTACGCCGACGAGGTGCGGGTCAAGA
AGGAGAACGACAGGGCGCGCAGAGCGGCGAACAAGCGCAAAGCCCTGGCG
GCCTTGGCGGGGGAGGATGTCATGACGCCCAGAGACCCCCCGAGGAAGAG
AGCGCAAGGCAACGGCCGCGACCGCGACCGCGTTTACGACCGCCGTGCTG
ACGGCGGTAGTGCTACCAGGGCGGGGAGAAATATGGGGACATGGGTGGGT
CCTGTTGCTGCGGCGGGTGGCGGTGCTGCCGATGATGTTGTTGCCGCGAA
GCGCGCACGAGCGAGCACGACGCTTTCTGGTGACGGTGAAGGGGGCGTTG
CCGCCAGGACTCTTCTGCCGTAGCCGCTGTGCCGATTGATGGCGCTGCGT
TCAGGGGCAACGCACGAGTTTCGAACTTCAACAATCATATGTGTGATGAT
GAGTTTACGCGGCGGAATTCTCGACGACTTACTTGTACGGAACGGCGACC
ACTATCATTTCGAGCTGTGATCGTGTCTAATTTAAATTGTTTCGAGATGG
GCCAGGGTGTTTTACAACACAACGGCTTACAGGAGATGGGAGGTACCAGA
GAGCCTGAAAAAAAAAAATGTCGCGAAGCGGTTACGTGTCACGTGACGGC
GCCTAGCAGTGTAGGTACTTTCGTGACGTCATGGCCCAGAGCATCAAGCA
ATAATTGAGACAGAAGTTTTGCAAGGGTTGACCCCGCCGACCAAAAAGTG
GACAAGCACGCACGCACGCACGCACGCGCATTGTTTTTTTTTTCGTCCGT
AGAGACCTTTGGTAATCAGGGGCTACTTGAGGGATGACTACTGAGCGTCG
GCGGAGGCGTCGTTGAAGAAAAGAGCGCGGGTGAAAGTCATGATGATTTA
AGTTATAGCCGAAGACTTCTTCTTACCACAAGGAACGAAAGTAGGTGCCA
TTTCTGACTGGTGGCAAGACAGCTTTCAACTTGATCGCTCATTTTTGCGC
TGGTTGTTTTTGCCGTGGTGGTGGAGCTATGATACACACGTGCATAACGT
GCAACTGCTGGCTCTCAACGTAGAAGTGATTTTCTCGGGCTGGCGGTCTT
GTGCGTCCCCCCGACCTGAA

Coding sequence (CDS) from alignment at P-littoralis_Contig7:203770..209539-

>mRNA_P-littoralis_Contig7.47.2 ID=mRNA_P-littoralis_Contig7.47.2|Name=mRNA_P-littoralis_Contig7.47.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1128bp|location=Sequence derived from alignment at P-littoralis_Contig7:203770..209539- (Pylaiella littoralis U1_48)
ATGTCTAGCTATGACGACATCCCGATGGACTTCGGAGATGATGATGAGGC
GAACGACTTCTTGACCGGCCAGCTTGCCGCGTTGGGCATCGATGAAGACC
TCGAGCTTTCGGGGGACGAGGAAGAAAGCGATGACCGTGCCTCTGCCGCC
GTCCGCCCCTCTGCTGCTTCACCTGAACCCCTATTCGCCCTGGCCGCGGC
ATCATCACTACCCCCGGTGCGATCCGCGACAACTCCTTCTGCTGCTGCCG
CTGCGGCCGCCGCCGAGGACTGGGGAGAAGCACCGCAACCCGTCTCCGAA
GTCGTCAACAACAAAACTCCACAACGAACCTCAGCAGAAAGAAGGACCGA
AGCATCTTCGCCAGCCGCTGTGGGAGGAAAAGTTGGGGAAGGCATAGAAG
ATGGAGAACTGTTGGAACTGCTGGAGAAGCCCCTTAGTGCCTCCCGCGGC
CGCCCACAGAAGCAGCAGCAGCAGCAGCAGCAGCACGGGGCTCGGAATAG
CAAAAAAAATGGGCGCAGGGCGCGAGGAGGTAACGTGACAATAAAGGAGT
GCGCCACTTGGATGTGCGAGCGTCTCGGTGAGCCCAAGTACTACCTCATG
TGTCGAGTGGTGTCGACCATCGGATACAAGAAAACGAGGCGCTTGCTGGA
GAGAGTGCAGGAGACACAGCAGGACGCAGGAGGCATGCCGACCGCGGACG
GCAGTCGGAAACGCACCGCGGGGGGCGTTTTCTTCACCCTGCTCAAGCAC
CACATGGAACCGGCAAAGCTCAAGGAGCTCTACGCCGACGAGGTGCGGGT
CAAGAAGGAGAACGACAGGGCGCGCAGAGCGGCGAACAAGCGCAAAGCCC
TGGCGGCCTTGGCGGGGGAGGATGTCATGACGCCCAGAGACCCCCCGAGG
AAGAGAGCGCAAGGCAACGGCCGCGACCGCGACCGCGTTTACGACCGCCG
TGCTGACGGCGGTAGTGCTACCAGGGCGGGGAGAAATATGGGGACATGGG
TGGGTCCTGTTGCTGCGGCGGGTGGCGGTGCTGCCGATGATGTTGTTGCC
GCGAAGCGCGCACGAGCGAGCACGACGCTTTCTGGTGACGGTGAAGGGGG
CGTTGCCGCCAGGACTCTTCTGCCGTAG