prot_P-littoralis_Contig7.47.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig7.47.2
Unique Name	prot_P-littoralis_Contig7.47.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	376

Homology

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.760e-98
Identity = 197/382 (51.57%), Postives = 226/382 (59.16%), Query Frame = 0

Query:    1 MSSYDDIPMDFGDDDEANDFLTGQLAALGIDEDLELSGDEEESDDRASAA--------VRPSAASPEPLFALXXXXXXXXXXXXXXXXXXXXXXXXEDWGEAPQ----PVSEVVNNKTPQ--RTSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRGRPQKQXXXXXX-----------HGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAGEDVMTPRDPPRKRAQGNGRDRDRVYDRRADGGSATRAGRNMGTWVGPVA-AXXXXXXXXXXXXKRARA 356
            MS++DD  MDFG DD+ +DFLTG+LAALGIDEDLELSG EEE D+RA A           P   +P P  A                         +DWG  P     P    +  +      T     T  + PAA GG+ G  +EDGEL++++++PL  SRGR Q+                   G R   K   +ARG NVTIKECA W+CERLGEPKYYLMC+VVSTIGY KTR LLE VQETQ+  GGMPTADGSRKRTAGGVFFTLLK HMEP++LKELYADE+RVKKE DRARRAANKRKA AALAGEDVMTPR+PPR R                    ATRAGR+MG W GP A A            KRARA
Sbjct:    1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSNKPPGIVAPSPQQA----SASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGR-GTAVEDGELVQMIDQPLRTSRGREQRSARDSGRGGGXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQE-TGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXX-----------XXXXXATRAGRDMGKWAGPTAGAGGRDGCGDAVAAKRARA 365

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.310e-11
Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 0

Query:  192 LGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELY-ADEVRVKKENDRARRAANKRKALAALAGEDVMTPR 296
            L E    L+   +  IG K  +RLL+RV ETQ+D GG+ TADGSRKRT GGVFF LL+  M P   K+L  AD  R K+E +  R+   KR       G D    R
Sbjct:   95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRD-GGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDAKRGR 199

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A0N8CKZ4_9CRUS (Phosphorylated adapter RNA export protein n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CKZ4_9CRUS)

HSP 1 Score: 67.8 bits (164), Expect = 8.140e-9
Identity = 60/191 (31.41%), Postives = 97/191 (50.79%), Query Frame = 0

Query:  100 EVVNNKTPQR-----TSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRGRPQKQXXXXXXHGARNSKKNGRRARGGNVTIKECATWM------CERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHME--PAKLKELYADEVRVKKENDRARRA 277
            E ++ KT QR        + +    +P  V   V E  E  + L+  +K L+ SR R  +Q      +  +  +   +  R  ++T+ E +T +        +L E K  L+ RVV  IG + T +L    QET+ D GG+  ADGSR+RT GGVF  LL++H E    K++E+++ E + K+++ R  RA
Sbjct:  137 EDIDEKTEQRIRKKIADLDEKYGGETPVIVEDPVAEDFE--QSLQKTQKLLT-SRKRKMEQRETQSPNTVQRPRSRTQLRRVEDLTVTESSTVLEVAQDITVKLHEEKMDLILRVVEIIGKELTIQLFRETQETEND-GGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREVFSQETKAKEQHKRTIRA 323

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: E9GGD8_DAPPU (Phosphorylated adapter RNA export protein n=3 Tax=Daphnia TaxID=6668 RepID=E9GGD8_DAPPU)

HSP 1 Score: 67.0 bits (162), Expect = 1.490e-8
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:  180 TIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHME--PAKLKELYADEVRVKKENDRARRA 277
            T+ E A  +  +L E K  L+ RVV  +G + T +L    QET+ D GG+  ADGSR+RT GGVF  LL++H E    K++E++++E + ++++ R  RA
Sbjct:  228 TVMEVAQDIALKLHEEKMDLILRVVEILGKEITIKLFYETQETEND-GGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREIFSEETKAREQHKRTLRA 326

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT)

HSP 1 Score: 65.9 bits (159), Expect = 2.320e-8
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 0

Query:  188 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK--HHMEPAKLKELYADEVRVKKENDRARRAA-NKRKALAAL 287
            + ERL E K+ L+   V  IG KK   L    ++ Q + GGM T +GSR+RT+GGVF TLLK  ++    ++KE++ D++ +KKE  + ++AA N+RK    L
Sbjct:  166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLN-GGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKEALKRKKAAYNQRKKARKL 267

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 62.8 bits (151), Expect = 1.650e-7
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0

Query:  188 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK 249
            + ERL EPK +L+ RVV  +G  + R+LL   ++ +  AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  134 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVES-AGGLLTIDGSRRRTAGGVFFHLLK 194

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 63.2 bits (152), Expect = 2.020e-7
Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 0

Query:  188 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK--HHMEPAKLKELYADEVRVKKE 270
            + ERL E K+ L+   V  IG KK   L +  +  Q  +GGM T +GSR+RT+GGVFFTLLK  ++    ++KE++ +++ +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQL-SGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A5B8MI43_9CHLO (Phosphorylated adapter RNA export protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MI43_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 2.520e-7
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 0

Query:  111 SAERRTEASSPAAVGGKVGEGIEDGELLELLEKPL-SASRGRPQKQXXXXXX---------HGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAG 289
            S E R  A   A+VG K G   ++  L +    P  + ++ RP  +               H   + + N  R+ G    IKE    +C++L EPK +LM +V+  +G      L+++V+  +++ GG   ADG+R+RT GGVF  LLK  +   +   ++ DE    KE  + R+A  +R   A  AG
Sbjct:   70 SLEERMNAELDASVGEKKGSRRQNSTLEDFFTSPKRTTAKARPYSKRAYSPRAIVSPPHKTHRVFSPRHNENRSTG--RFIKE----VCQKLNEPKQHLMRKVMEQVGKIFIMELVDQVERVEEE-GGQFVADGTRRRTKGGVFLNLLKAQVTKEQWDTIFEDE----KEAQKRRKAMKRRLRYAGEAG 247

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BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A8J2RPI4_9CRUS (Phosphorylated adapter RNA export protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RPI4_9CRUS)

HSP 1 Score: 63.2 bits (152), Expect = 2.700e-7
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:  180 TIKECATWMCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKHHMEP--AKLKELYADEVRVKKENDRARRA 277
            T+ E A  +  +L E K  L+ R+V  +G +   +L    QET+ D GG+  A+GSR+RT GGVF  LL++H E    K++E++++E + K++  R  RA
Sbjct:  230 TVLEVAQDIALKLHEEKMELIIRIVEILGKEIAIKLFYETQETEND-GGIMIANGSRRRTPGGVFLYLLRNHEEIPLVKIREIFSEETKAKEQTKRTLRA 328

[Close]

BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Match: A0A293M5C7_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M5C7_ORNER)

HSP 1 Score: 62.8 bits (151), Expect = 3.010e-7
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0

Query:  188 MCERLGEPKYYLMCRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLK 249
            + ERL EPK +L+ RVV  +G  + R+LL   ++ +  AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  223 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVES-AGGLLTIDGSRRRTAGGVFFHLLK 283

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig7.47.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHZ0_ECTSI	5.760e-98	51.57	Phosphorylated adapter RNA export protein n=2 Tax=...	[more]
A0A8J2X059_9STRA	2.310e-11	45.28	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A0N8CKZ4_9CRUS	8.140e-9	31.41	Phosphorylated adapter RNA export protein n=5 Tax=...	[more]
E9GGD8_DAPPU	1.490e-8	40.00	Phosphorylated adapter RNA export protein n=3 Tax=...	[more]
A0A7D9EF16_PARCT	2.320e-8	40.78	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A293N1Q8_ORNER	1.650e-7	53.23	Phosphorylated adapter RNA export protein (Fragmen...	[more]
UPI001069D661	2.020e-7	42.35	uncharacterized protein LOC114518314 n=1 Tax=Dendr...	[more]
A0A5B8MI43_9CHLO	2.520e-7	29.63	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A8J2RPI4_9CRUS	2.700e-7	38.00	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A293M5C7_ORNER	3.010e-7	53.23	Phosphorylated adapter RNA export protein (Fragmen...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 186..264 e-value: 1.9E-22 score: 79.1
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 176..276 e-value: 2.4E-24 score: 87.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..322
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 151..287

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig7	contig	P-littoralis_Contig7:204517..209494 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig7.47.2	mRNA_P-littoralis_Contig7.47.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig7 203770..209539 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig7.47.2 ID=prot_P-littoralis_Contig7.47.2|Name=mRNA_P-littoralis_Contig7.47.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=376bp
MSSYDDIPMDFGDDDEANDFLTGQLAALGIDEDLELSGDEEESDDRASAA
VRPSAASPEPLFALAAASSLPPVRSATTPSAAAAAAAAEDWGEAPQPVSE
VVNNKTPQRTSAERRTEASSPAAVGGKVGEGIEDGELLELLEKPLSASRG
RPQKQQQQQQQHGARNSKKNGRRARGGNVTIKECATWMCERLGEPKYYLM
CRVVSTIGYKKTRRLLERVQETQQDAGGMPTADGSRKRTAGGVFFTLLKH
HMEPAKLKELYADEVRVKKENDRARRAANKRKALAALAGEDVMTPRDPPR
KRAQGNGRDRDRVYDRRADGGSATRAGRNMGTWVGPVAAAGGGAADDVVA
AKRARASTTLSGDGEGGVAARTLLP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019385	PHAX_RNA-binding_domain
IPR038092	PHAX_RNA-binding_sf
IPR039047	PHAX