mRNA_P-littoralis_Contig699.27.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig699.27.1
Unique NamemRNA_P-littoralis_Contig699.27.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 4.060e-108
Identity = 236/568 (41.55%), Postives = 311/568 (54.75%), Query Frame = 1
Query:    7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            GVGG+YD GSN+V  QP+S  PP    G  +RCGR     H    CAAPRRFEG XXXXXXXXXXX     S         PH++ +  AGA G               S+ Q        D+P   G   Y   +  G                                   PG+       +   S                   G G +  G+GE           G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H S GHA+ KTL ETA QMGIK TGI +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS++ V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  435 GVGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSXXXXXX--XXXXXXXSDAAGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSRGHANPKTLYETAKQMGIKATGIPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNIMRE 970          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 6.880e-108
Identity = 232/568 (40.85%), Postives = 309/568 (54.40%), Query Frame = 1
Query:    7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            GVGG YD GSN+VY QP+S  PP    G  +RCGR          CAAPRRFEG XXXXXXXXXXX     S         PH++ +  AGA G               S+ Q        D+P   G   Y   +  G                                   PG+       +   S                   G G +  G+GE           G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMG+K+TG  +YCDGCAE KAI+R VPKV+SPSR   RP +RV  ++ GPF +S+GG+ Y++ I+DH+++YGW   + ++S + V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  218 GVGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFDFVDIFHGSXXXXXX--XXXXXXXSDATGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVICHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGVKVTGTPEYCDGCAELKAIQRSVPKVISPSRRTTRPVERVAMNLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREESGTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 753          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 7.260e-108
Identity = 239/568 (42.08%), Postives = 317/568 (55.81%), Query Frame = 1
Query:    7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            GVGGIYD GS++VY QP+S  PP+   G  +RCGR          CAAPRRFEG XXXXXXXXXXX     S         PH++ +  AGA G               S+ Q        D+P   G   Y   +  G                                   PG+       +   SG GV +             G G +  G+GE           G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG  +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS++ V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  435 GVGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSG-GV-EXXXXXXXXXSDAAGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCSEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 970          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 5.550e-107
Identity = 235/556 (42.27%), Postives = 308/556 (55.40%), Query Frame = 1
Query:    7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPRAPGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQ--HG---------------DGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            GVGGIYD GSN+VY QP+S  PP    G  +RCGRC R GH    CAAPRRFEG XXXXXXXXXXX     S         PH++ +  AGA G               S+ Q        D+P   G   Y       G                                 +    P  G     HG               D    D  A G+  G   G +F + L  +         PS +F  RPG++ FLGDTGAV+H V + E V   R P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++  ++IQ     I L+   A++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG  +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS++ V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  477 GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG--VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSXXXXXXXXXXXXXSDAAGADPEALGNGEGTFGGRLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKV---RLPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILPLNMIQDRH-EIKLNRDRASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAEYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLACVLTDNGAEWVNAEFQGLLAELNITRE 1009          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 2.130e-102
Identity = 175/342 (51.17%), Postives = 237/342 (69.30%), Query Frame = 1
Query:  598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            G+  G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG  +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH++SYGW   + +KS++ V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  500 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTSYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 840          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JE07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE07_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 2.850e-101
Identity = 172/342 (50.29%), Postives = 234/342 (68.42%), Query Frame = 1
Query:  598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            G+  G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VV  L LD++S + IQ  +  I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG   YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS++ V  AF+ W+AS+K L   HGG+  +L DNG+EWVN +F  LL +L I RE
Sbjct:  170 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVQGLALDILSLNKIQD-RYEIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPLYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLIDNGTEWVNAEFWGLLAELNITRE 510          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JN93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN93_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 2.210e-97
Identity = 168/342 (49.12%), Postives = 226/342 (66.08%), Query Frame = 1
Query:  598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVP--PSTRSPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            G+  G   GG+F + L  +         PS +F  RPG++ FLGDTGAV+H V + E VYNRR P   E LLM+GDG  +P   FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV   P   SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK TG  +YCD CA SK I+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y+I I+DH ++YGW   + DKS + V  A++ W+AS+K L   HG +  ++TDN +EWVN +F+ LL +L I RE
Sbjct:  244 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGTHIPGDFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDRLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKATGTPEYCDECAGSKVIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGTKYVIQILDHETNYGWVCCLRDKSGTNVVAAYRAWYASIKSLLATHGRLGCVMTDNSTEWVNAEFRGLLAELNITRE 584          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5J7K8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K8_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 2.900e-91
Identity = 159/348 (45.69%), Postives = 218/348 (62.64%), Query Frame = 1
Query:  568 DGEQVDSSADGDSGGVIWGGMFTLQLYAAYAPP------SQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTRSPPAPMVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            D    D    G+  G + GG+F   L  +   P      S +F  RPG++ FLGDTGAV+H V ++E VYN+R P   E LL++GDG+ +PV CFGDLD++ H   DVRVTL+NV  VP L LD++S + IQ     I L+  GA++L G+                        P  MV+A++RP    SM  N +  SLGH + KTL ETATQMG K+TG  +YCDGCAESKAI+R VPK++SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS++ V  AF+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  268 DAAGADPETLGNGEGTLGGGLFATHLVCSVTLPPPLREASDIFPYRPGSTVFLGDTGAVVHVVPSEEKVYNKRPPLPEERLLLIGDGKHIPVECFGDLDVIFHRPEDVRVTLKNVGGVPGLALDILSLNKIQDRH-EIKLNRHGASILGGQ------------------------PLAMVSAMLRPVSQSSMENNALLCSLGHDNAKTLYETATQMGTKVTGTPEYCDGCAESKAIQRSVPKIISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 590          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5L9C8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C8_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.590e-85
Identity = 141/274 (51.46%), Postives = 193/274 (70.44%), Query Frame = 1
Query:  634 TLQLYAAYAPPSQVFQP---RPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKS 1434
            TL +   + P ++  +P   RPG++ FL DTGAV+H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P  +  SPP P  MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG  +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+ Y++ I+DH+++YGW   + +KS
Sbjct:   33 TLSVPLPHPPRARTIRPFPHRPGSTVFLEDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKS 305          
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JFE5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE5_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.440e-80
Identity = 147/294 (50.00%), Postives = 195/294 (66.33%), Query Frame = 1
Query:  727 IHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPP-----STRSPPAPMVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
            +H V + E VYNRR P   E LLM+GDG+ +PV  FGDLD++ HC  DVRVTL+NV VVP L LD++S + IQ     I L+  GA++L G+V +    +G++++GTRV P     S   PPA MVAA++RPG   S++ N +H SLGHA+ KTL ETA QMGIK+TG  +YCDGCAESKAI+R VPKV+SPSR   RP +RV  D+ GPF +S+GG+              W   + +KS + V   F+ W+AS+K L   HGG+  +LTDNG+EWVN +F+ LL +L I RE
Sbjct:  450 VHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASMLGGRVRMTKLPHGNYIQGTRVDPLPQRESPFQPPA-MVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAK-------------WICFLREKSGTNVVAVFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 728          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN41_9PHAE4.060e-10841.55Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN1_9PHAE6.880e-10840.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVD9_9PHAE7.260e-10842.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYB5_9PHAE5.550e-10742.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAC2_9PHAE2.130e-10251.17Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JE07_9PHAE2.850e-10150.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN93_9PHAE2.210e-9749.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7K8_9PHAE2.900e-9145.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L9C8_9PHAE1.590e-8551.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JFE5_9PHAE2.440e-8050.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig699contigP-littoralis_Contig699:119228..120822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7029.ACYPI061196-PA
PFAMsBaculo_F,RVT_1,rve
Model size1595
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.73e-10
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria,41WI3@6656|Arthropoda,3SIRK@50557|Insecta,3ECJT@33342|Paraneoptera
DescriptionK02A2.6-like
Cds size1593
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791446.376449-CDS-P-littoralis_Contig699:119229..1208221680791446.376449-CDS-P-littoralis_Contig699:119229..120822Pylaiella littoralis U1_48CDSP-littoralis_Contig699 119230..120822 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig699.27.1prot_P-littoralis_Contig699.27.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig699 119230..120822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig699.27.1

>prot_P-littoralis_Contig699.27.1 ID=prot_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=531bp
RFGVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAA
PRRFEGHCGACTQFGHMRKNCAISGLSASLAAPPHVHAIAPAGAAGSAAA
HGWGGGGSGALSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPRAPGD
GQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADG
DSGGVIWGGMFTLQLYAAYAPPSQVFQPRPGASFFLGDTGAVIHAVSNDE
HVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAV
VPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTR
VPPSTRSPPAPMVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMG
IKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSR
STGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKH
GGVESLLTDNGSEWVNEDFKRLLVDLGIGRE
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mRNA from alignment at P-littoralis_Contig699:119228..120822-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig699.27.1 ID=mRNA_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1595bp|location=Sequence derived from alignment at P-littoralis_Contig699:119228..120822- (Pylaiella littoralis U1_48)
AGATTCGGTGTTGGGGGCATCTACGACAACGGAAGCAACTCCGTGTATTT CCAGCCGAAGTCTCCAATTCCTCCAAATATTCGGCAGGGAGTAGAGTACC GTTGTGGTCGGTGTGGCAGGTCTGGGCACAAGCCCGAAATTTGTGCGGCC CCGCGGCGGTTCGAGGGACATTGCGGGGCGTGCACCCAGTTTGGGCACAT GCGAAAAAATTGCGCCATCAGTGGTCTCTCGGCATCGCTGGCCGCACCAC CGCATGTCCATGCTATCGCTCCCGCCGGCGCTGCTGGTAGCGCTGCAGCA CACGGTTGGGGGGGCGGCGGCAGCGGCGCCTTGTCCTCCCAGCAGATCGT CGTGGATCAGGGCGGCGACGACATACCTTTACAGCCGGGCGGGGAGGCGT ACGGCGGTGGAGTGGATGGCGGCGGGGGTTTCCCGCGAGCTCCGGGGGAC GGGCAGATGTCCTCCGCTGTTGTAGCTCAAAACAGTGGCGACGGTGTTGG CGACGGATGGAACACAGGATTGGCACTGCAGCAGCAGCTACCCGGGCGTG GGCATCAGCAGCATGGCGACGGTGAGCAGGTTGATTCTTCCGCAGACGGG GACTCCGGTGGAGTGATTTGGGGCGGAATGTTCACGCTTCAGCTATACGC TGCCTATGCGCCTCCCTCTCAGGTTTTCCAGCCGCGACCGGGGGCCTCTT TTTTTCTGGGAGACACGGGCGCGGTAATTCATGCCGTTTCCAACGATGAA CACGTCTACAATCGGCGTGCGCCGCGCCGCGGAGAGACGCTTCTCATGGT GGGTGACGGGGAGTGTCTGCCTGTATCGTGCTTTGGGGATTTGGACCTGG TGCTTCATTGCCGTTACGACGTGCGGGTGACTCTGCGCAACGTAGCGGTC GTCCCGAAATTGGTGTTGGATGTCATCTCGTTCAGCGTCATCCAGAAGGC AAAGATACCAATACTGCTGGATGAGAGGGGGGCGACGCTGCTCGACGGCA AGGTCACCATTGCCATGCACGAGAACGGTAGTTTTGTCGAGGGTACTCGT GTTCCCCCCAGTACCCGTTCTCCGCCAGCGCCGATGGTTGCGGCCGTAAT GCGGCCGGGCCGGCCCAAGAGCATGAATGTGAACGACATGCACTCCTCTC TTGGGCACGCGAGCCGCAAAACTTTGGTGGAGACGGCGACGCAGATGGGC ATCAAGCTCACCGGCATCCAGCAGTATTGCGACGGGTGCGCCGAAAGCAA GGCGATCAGGCGCGGTGTCCCCAAGGTTGTCAGCCCTTCGCGCATGGCGG CACGGCCGTTCCAGCGGGTGGGGACGGACATGGGGGGTCCTTTCTCGCGG TCAACCGGCGGCTCCGCCTACATCATTTCTATCGTGGACCACTACAGCAG CTACGGGTGGGCGTTGGTCGTCCCCGACAAGAGTGCAAGCACCGTTTCGA TCGCGTTCAAGGGGTGGCATGCGTCGGTCAAGCCCCTCGCCGACAAGCAC GGCGGGGTGGAGTCGCTCCTCACCGACAACGGATCCGAATGGGTCAACGA GGACTTCAAGCGGCTGCTGGTGGATCTGGGCATCGGGCGGGAGCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig699:119228..120822-

>mRNA_P-littoralis_Contig699.27.1 ID=mRNA_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1593bp|location=Sequence derived from alignment at P-littoralis_Contig699:119228..120822- (Pylaiella littoralis U1_48)
AGATTCGGTGTTGGGGGCATCTACGACAACGGAAGCAACTCCGTGTATTT
CCAGCCGAAGTCTCCAATTCCTCCAAATATTCGGCAGGGAGTAGAGTACC
GTTGTGGTCGGTGTGGCAGGTCTGGGCACAAGCCCGAAATTTGTGCGGCC
CCGCGGCGGTTCGAGGGACATTGCGGGGCGTGCACCCAGTTTGGGCACAT
GCGAAAAAATTGCGCCATCAGTGGTCTCTCGGCATCGCTGGCCGCACCAC
CGCATGTCCATGCTATCGCTCCCGCCGGCGCTGCTGGTAGCGCTGCAGCA
CACGGTTGGGGGGGCGGCGGCAGCGGCGCCTTGTCCTCCCAGCAGATCGT
CGTGGATCAGGGCGGCGACGACATACCTTTACAGCCGGGCGGGGAGGCGT
ACGGCGGTGGAGTGGATGGCGGCGGGGGTTTCCCGCGAGCTCCGGGGGAC
GGGCAGATGTCCTCCGCTGTTGTAGCTCAAAACAGTGGCGACGGTGTTGG
CGACGGATGGAACACAGGATTGGCACTGCAGCAGCAGCTACCCGGGCGTG
GGCATCAGCAGCATGGCGACGGTGAGCAGGTTGATTCTTCCGCAGACGGG
GACTCCGGTGGAGTGATTTGGGGCGGAATGTTCACGCTTCAGCTATACGC
TGCCTATGCGCCTCCCTCTCAGGTTTTCCAGCCGCGACCGGGGGCCTCTT
TTTTTCTGGGAGACACGGGCGCGGTAATTCATGCCGTTTCCAACGATGAA
CACGTCTACAATCGGCGTGCGCCGCGCCGCGGAGAGACGCTTCTCATGGT
GGGTGACGGGGAGTGTCTGCCTGTATCGTGCTTTGGGGATTTGGACCTGG
TGCTTCATTGCCGTTACGACGTGCGGGTGACTCTGCGCAACGTAGCGGTC
GTCCCGAAATTGGTGTTGGATGTCATCTCGTTCAGCGTCATCCAGAAGGC
AAAGATACCAATACTGCTGGATGAGAGGGGGGCGACGCTGCTCGACGGCA
AGGTCACCATTGCCATGCACGAGAACGGTAGTTTTGTCGAGGGTACTCGT
GTTCCCCCCAGTACCCGTTCTCCGCCAGCGCCGATGGTTGCGGCCGTAAT
GCGGCCGGGCCGGCCCAAGAGCATGAATGTGAACGACATGCACTCCTCTC
TTGGGCACGCGAGCCGCAAAACTTTGGTGGAGACGGCGACGCAGATGGGC
ATCAAGCTCACCGGCATCCAGCAGTATTGCGACGGGTGCGCCGAAAGCAA
GGCGATCAGGCGCGGTGTCCCCAAGGTTGTCAGCCCTTCGCGCATGGCGG
CACGGCCGTTCCAGCGGGTGGGGACGGACATGGGGGGTCCTTTCTCGCGG
TCAACCGGCGGCTCCGCCTACATCATTTCTATCGTGGACCACTACAGCAG
CTACGGGTGGGCGTTGGTCGTCCCCGACAAGAGTGCAAGCACCGTTTCGA
TCGCGTTCAAGGGGTGGCATGCGTCGGTCAAGCCCCTCGCCGACAAGCAC
GGCGGGGTGGAGTCGCTCCTCACCGACAACGGATCCGAATGGGTCAACGA
GGACTTCAAGCGGCTGCTGGTGGATCTGGGCATCGGGCGGGAG
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