mRNA_P-littoralis_Contig699.27.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 358 bits (918), Expect = 4.060e-108 Identity = 236/568 (41.55%), Postives = 311/568 (54.75%), Query Frame = 1
Query: 7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
GVGG+YD GSN+V QP+S PP G +RCGR H CAAPRRFEG XXXXXXXXXXX S PH++ + AGA G S+ Q D+P G Y + G PG+ + S G G + G+GE G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H S GHA+ KTL ETA QMGIK TGI +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS++ V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 435 GVGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSXXXXXX--XXXXXXXSDAAGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSRGHANPKTLYETAKQMGIKATGIPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNIMRE 970
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE) HSP 1 Score: 350 bits (898), Expect = 6.880e-108 Identity = 232/568 (40.85%), Postives = 309/568 (54.40%), Query Frame = 1
Query: 7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
GVGG YD GSN+VY QP+S PP G +RCGR CAAPRRFEG XXXXXXXXXXX S PH++ + AGA G S+ Q D+P G Y + G PG+ + S G G + G+GE G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMG+K+TG +YCDGCAE KAI+R VPKV+SPSR RP +RV ++ GPF +S+GG+ Y++ I+DH+++YGW + ++S + V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 218 GVGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFDFVDIFHGSXXXXXX--XXXXXXXSDATGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVICHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGVKVTGTPEYCDGCAELKAIQRSVPKVISPSRRTTRPVERVAMNLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREESGTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 753
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 363 bits (931), Expect = 7.260e-108 Identity = 239/568 (42.08%), Postives = 317/568 (55.81%), Query Frame = 1
Query: 7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPR-----------------------------APGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQHGDGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
GVGGIYD GS++VY QP+S PP+ G +RCGR CAAPRRFEG XXXXXXXXXXX S PH++ + AGA G S+ Q D+P G Y + G PG+ + SG GV + G G + G+GE G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS++ V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 435 GVGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG-VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSG-GV-EXXXXXXXXXSDAAGAGPEALGNGE-----------GTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCSEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 970
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE) HSP 1 Score: 355 bits (910), Expect = 5.550e-107 Identity = 235/556 (42.27%), Postives = 308/556 (55.40%), Query Frame = 1
Query: 7 GVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAPRRFEGHXXXXXXXXXXXKNCAISGLSASLAAPPHVHAIAPAGAAGSAAXXXXXXXXXXXLSSQQIVVDQGGDDIPLQPGGEAYGGGVDGGGGFPRAPGDGQMSSAVVAQNSGDGVGDGWNTGLALQQQLPGRGHQQ--HG---------------DGEQVDSSADGDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
GVGGIYD GSN+VY QP+S PP G +RCGRC R GH CAAPRRFEG XXXXXXXXXXX S PH++ + AGA G S+ Q D+P G Y G + P G HG D D A G+ G G +F + L + PS +F RPG++ FLGDTGAV+H V + E V R P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++ ++IQ I L+ A++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS++ V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 477 GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNRH------PHLNVVTSAGALGP-----EYAYTAADTSAVQFR------DVPAADG--VYYSDTMLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTPGEPYFGFVDIFHGSXXXXXXXXXXXXXSDAAGADPEALGNGEGTFGGRLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKV---RLPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILPLNMIQDRH-EIKLNRDRASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAEYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLACVLTDNGAEWVNAEFQGLLAELNITRE 1009
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE) HSP 1 Score: 348 bits (893), Expect = 2.130e-102 Identity = 175/342 (51.17%), Postives = 237/342 (69.30%), Query Frame = 1
Query: 598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
G+ G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH++SYGW + +KS++ V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 500 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTSYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 840
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JE07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE07_9PHAE) HSP 1 Score: 339 bits (869), Expect = 2.850e-101 Identity = 172/342 (50.29%), Postives = 234/342 (68.42%), Query Frame = 1
Query: 598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
G+ G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VV L LD++S + IQ + I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS++ V AF+ W+AS+K L HGG+ +L DNG+EWVN +F LL +L I RE
Sbjct: 170 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVQGLALDILSLNKIQD-RYEIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPLYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLIDNGTEWVNAEFWGLLAELNITRE 510
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JN93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN93_9PHAE) HSP 1 Score: 329 bits (843), Expect = 2.210e-97 Identity = 168/342 (49.12%), Postives = 226/342 (66.08%), Query Frame = 1
Query: 598 GDSGGVIWGGMFTLQLYAAYAP------PSQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVP--PSTRSPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
G+ G GG+F + L + PS +F RPG++ FLGDTGAV+H V + E VYNRR P E LLM+GDG +P FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK TG +YCD CA SK I+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y+I I+DH ++YGW + DKS + V A++ W+AS+K L HG + ++TDN +EWVN +F+ LL +L I RE
Sbjct: 244 GNGEGTFGGGLFAMHLVCSVTSSPPVREPSDLFPHRPGSTVFLGDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGTHIPGDFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDRLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKATGTPEYCDECAGSKVIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGTKYVIQILDHETNYGWVCCLRDKSGTNVVAAYRAWYASIKSLLATHGRLGCVMTDNSTEWVNAEFRGLLAELNITRE 584
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5J7K8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K8_9PHAE) HSP 1 Score: 307 bits (787), Expect = 2.900e-91 Identity = 159/348 (45.69%), Postives = 218/348 (62.64%), Query Frame = 1
Query: 568 DGEQVDSSADGDSGGVIWGGMFTLQLYAAYAPP------SQVFQPRPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTRSPPAPMVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
D D G+ G + GG+F L + P S +F RPG++ FLGDTGAV+H V ++E VYN+R P E LL++GDG+ +PV CFGDLD++ H DVRVTL+NV VP L LD++S + IQ I L+ GA++L G+ P MV+A++RP SM N + SLGH + KTL ETATQMG K+TG +YCDGCAESKAI+R VPK++SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS++ V AF+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 268 DAAGADPETLGNGEGTLGGGLFATHLVCSVTLPPPLREASDIFPYRPGSTVFLGDTGAVVHVVPSEEKVYNKRPPLPEERLLLIGDGKHIPVECFGDLDVIFHRPEDVRVTLKNVGGVPGLALDILSLNKIQDRH-EIKLNRHGASILGGQ------------------------PLAMVSAMLRPVSQSSMENNALLCSLGHDNAKTLYETATQMGTKVTGTPEYCDGCAESKAIQRSVPKIISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKSSTNVVAAFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 590
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5L9C8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C8_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.590e-85 Identity = 141/274 (51.46%), Postives = 193/274 (70.44%), Query Frame = 1
Query: 634 TLQLYAAYAPPSQVFQP---RPGASFFLGDTGAVIHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPPSTR--SPPAP--MVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKS 1434
TL + + P ++ +P RPG++ FL DTGAV+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P + SPP P MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ Y++ I+DH+++YGW + +KS
Sbjct: 33 TLSVPLPHPPRARTIRPFPHRPGSTVFLEDTGAVVHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASILGGRVRMTKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAKYVMQILDHHTNYGWICFLREKS 305
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Match: A0A6H5JFE5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 2.440e-80 Identity = 147/294 (50.00%), Postives = 195/294 (66.33%), Query Frame = 1
Query: 727 IHAVSNDEHVYNRRAPRRGETLLMVGDGECLPVSCFGDLDLVLHCRYDVRVTLRNVAVVPKLVLDVISFSVIQKAKIPILLDERGATLLDGKVTIAMHENGSFVEGTRVPP-----STRSPPAPMVAAVMRPGRPKSMNVNDMHSSLGHASRKTLVETATQMGIKLTGIQQYCDGCAESKAIRRGVPKVVSPSRMAARPFQRVGTDMGGPFSRSTGGSAYIISIVDHYSSYGWALVVPDKSASTVSIAFKGWHASVKPLADKHGGVESLLTDNGSEWVNEDFKRLLVDLGIGRE 1593
+H V + E VYNRR P E LLM+GDG+ +PV FGDLD++ HC DVRVTL+NV VVP L LD++S + IQ I L+ GA++L G+V + +G++++GTRV P S PPA MVAA++RPG S++ N +H SLGHA+ KTL ETA QMGIK+TG +YCDGCAESKAI+R VPKV+SPSR RP +RV D+ GPF +S+GG+ W + +KS + V F+ W+AS+K L HGG+ +LTDNG+EWVN +F+ LL +L I RE
Sbjct: 450 VHVVPSGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILSLNKIQDRH-EIKLNRHGASMLGGRVRMTKLPHGNYIQGTRVDPLPQRESPFQPPA-MVAAMLRPGTQSSIDYNALHCSLGHANSKTLYETAKQMGIKVTGTPEYCDGCAESKAIQRSVPKVISPSRRTTRPLERVAMDLAGPFGQSSGGAK-------------WICFLREKSGTNVVAVFRAWYASIKSLLATHGGLGCVLTDNGTEWVNAEFRGLLAELNITRE 728 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig699.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig699.27.1 >prot_P-littoralis_Contig699.27.1 ID=prot_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=531bp RFGVGGIYDNGSNSVYFQPKSPIPPNIRQGVEYRCGRCGRSGHKPEICAAback to top mRNA from alignment at P-littoralis_Contig699:119228..120822- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig699.27.1 ID=mRNA_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1595bp|location=Sequence derived from alignment at P-littoralis_Contig699:119228..120822- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig699:119228..120822- >mRNA_P-littoralis_Contig699.27.1 ID=mRNA_P-littoralis_Contig699.27.1|Name=mRNA_P-littoralis_Contig699.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1593bp|location=Sequence derived from alignment at P-littoralis_Contig699:119228..120822- (Pylaiella littoralis U1_48)back to top |