mRNA_P-littoralis_Contig693.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A6F8U1X0_9GAMM (Cell division protein Fic n=1 Tax=Halomonas hydrothermalis TaxID=115561 RepID=A0A6F8U1X0_9GAMM) HSP 1 Score: 302 bits (774), Expect = 1.510e-102 Identity = 151/174 (86.78%), Postives = 157/174 (90.23%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GSEN VL NL+ ITDP E+NIAETELLEALYMQVFD FPE LTF TICRWHR G VYRWAGQYRTVDMSKPNIRFASP+QIQRLTKEFE+QYLS FAELPE+ DEQLV FLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWN +KEYYFKAIQAGQG D
Sbjct: 16 GSENKVLGNLIGITDPAEINIAETELLEALYMQVFDDFPEALTFQTICRWHRAWLG-NVYRWAGQYRTVDMSKPNIRFASPIQIQRLTKEFEEQYLSHFAELPEVGDEQLVTFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNEHKEYYFKAIQAGQGHD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A060B417_9GAMM (Cell division protein Fic n=2 Tax=Halomonas TaxID=2745 RepID=A0A060B417_9GAMM) HSP 1 Score: 296 bits (759), Expect = 2.910e-100 Identity = 148/175 (84.57%), Postives = 159/175 (90.86%), Query Frame = 3
Query: 42 TGSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
TGSEN VL NLVEITDPTEMN+AETELLE LY+QVFD FPETLTF TIC+WHR G VYRWAGQYRTVDMSKPNIRFASP+QIQ+L +EFED+YLSRFA+LPEM DEQLVAFLAE HVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWN +K+YYFKAIQAG+ D
Sbjct: 15 TGSENRVLGNLVEITDPTEMNVAETELLEDLYIQVFDDFPETLTFQTICQWHRTWLG-NVYRWAGQYRTVDMSKPNIRFASPIQIQKLAQEFEDRYLSRFAKLPEMDDEQLVAFLAEMHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNEHKDYYFKAIQAGRDGD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A1U9R541_9GAMM (Cell filamentation protein Fic n=1 Tax=Halomonas sp. 'Soap Lake #7' TaxID=1962264 RepID=A0A1U9R541_9GAMM) HSP 1 Score: 296 bits (758), Expect = 4.130e-100 Identity = 150/174 (86.21%), Postives = 156/174 (89.66%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GSEN VL NLV IT PTEMNIAETELLEALY+QVFDAFPE LTF IC+WHR G VYRWAGQYRTVDMSKPNIRFASP+QIQRLTKEFEDQ LSRFAELPEM DEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVM VKAGAQPLDYSLWN +K+YYFKAIQAG+ D
Sbjct: 16 GSENRVLGNLVGITSPTEMNIAETELLEALYIQVFDAFPEMLTFQAICQWHRAWLG-NVYRWAGQYRTVDMSKPNIRFASPIQIQRLTKEFEDQCLSRFAELPEMGDEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMVVKAGAQPLDYSLWNEHKDYYFKAIQAGRDGD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A2M9TGB1_9GAMM (Cell filamentation protein Fic n=6 Tax=Halomonadaceae TaxID=28256 RepID=A0A2M9TGB1_9GAMM) HSP 1 Score: 262 bits (670), Expect = 1.030e-86 Identity = 132/170 (77.65%), Postives = 145/170 (85.29%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAG 554
GSE+ VL+NL I DP +MNIAETELL ALY+QVFD FPET+ F I WHR G VY WAGQYRTVDMSKP+IRFASPLQI RL + FE+QYL+RFA LPEM DEQLV+FLAE HVEFILIHPFREGNGRISRLLLD+MAVKAGAQPLDYSLWN +K+YYFKAIQAG
Sbjct: 16 GSEDKVLKNLAGIDDPADMNIAETELLAALYIQVFDTFPETVDFKRIRHWHRAWLG-NVYDWAGQYRTVDMSKPDIRFASPLQIHRLAQAFENQYLARFATLPEMGDEQLVSFLAEMHVEFILIHPFREGNGRISRLLLDMMAVKAGAQPLDYSLWNEHKDYYFKAIQAG 184
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A1U633_MARN8 (Filamentation induced by cAMP protein Fic n=4 Tax=Marinobacter TaxID=2742 RepID=A1U633_MARN8) HSP 1 Score: 262 bits (670), Expect = 1.060e-86 Identity = 130/174 (74.71%), Postives = 147/174 (84.48%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GS+N VL NL ITDP EMNI ET+LLE LY+QVFD FPE LTF T+C+WHR G VY WAGQ RTVDMSKPNIRFASP+QI +L ++FE +YL RFAELPEM DE+LVAFLAE HVEFILIHPFREGNGRISRLLLDVMA KAGA+PLDYSLW+ +K++YFKAIQAG+ D
Sbjct: 16 GSDNKVLRNLPGITDPEEMNIVETDLLEDLYLQVFDNFPEELTFETLCQWHRAWLG-NVYSWAGQSRTVDMSKPNIRFASPVQIPKLAEKFEARYLPRFAELPEMTDEELVAFLAEVHVEFILIHPFREGNGRISRLLLDVMAAKAGAEPLDYSLWDEHKDFYFKAIQAGRDGD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A2E5SED9_9GAMM (Cell filamentation protein Fic n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A2E5SED9_9GAMM) HSP 1 Score: 260 bits (665), Expect = 6.140e-86 Identity = 127/174 (72.99%), Postives = 147/174 (84.48%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GS N VL NL+E+TDP EMNIAETELL+ LY+QVFD FPE L+ T+C WHR G +Y WAGQYRTVDMSKP+I FASPLQI RL ++FE+ YL+RF LP+M DE L+ FLAE+HVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLW++NKE+YFK+IQAG+ D
Sbjct: 16 GSGNRVLRNLIEVTDPVEMNIAETELLQDLYIQVFDNFPEALSLHTLCEWHRLWLG-NIYSWAGQYRTVDMSKPDIFFASPLQIPRLARQFEENYLTRFDGLPDMDDEALITFLAESHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWDKNKEFYFKSIQAGRDGD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A1Y0CZS2_9GAMM (Cell filamentation protein Fic n=1 Tax=Oceanisphaera avium TaxID=1903694 RepID=A0A1Y0CZS2_9GAMM) HSP 1 Score: 252 bits (644), Expect = 9.610e-83 Identity = 124/174 (71.26%), Postives = 143/174 (82.18%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GS N VL N+++ITDP EM++AETELL LY VFD FP+ L+FP + WHR G +Y WAGQYR+VDMSKPNIRFASPLQI +L + FE QYL+RF ELP D+QLVAFLAE HVEFIL+HPFREGNGRISRLLLDVMAVKAGAQPLDYSLW+ +K++YFKAIQAG RD
Sbjct: 16 GSNNQVLSNMLDITDPAEMSVAETELLAQLYFYVFDDFPQALSFPMLSFWHRAWLG-NLYPWAGQYRSVDMSKPNIRFASPLQIAKLAQSFEAQYLARFNELPTFNDQQLVAFLAEAHVEFILLHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWDEHKDFYFKAIQAGLARD 188
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A7Z1HJV0_9GAMM (Cell filamentation protein Fic n=8 Tax=Pseudoalteromonadaceae TaxID=267888 RepID=A0A7Z1HJV0_9GAMM) HSP 1 Score: 187 bits (474), Expect = 6.340e-57 Identity = 96/177 (54.24%), Postives = 121/177 (68.36%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVF---DAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GSE VL N + I D EM+ E LL LY ++F + + +F + WHR G VY WAG+ R+VDM K +F SPLQI+R FED+YLSRF LPEM DE+LV+FLA++HVEFILIHPFREGNGR+SRLL+D + KAG LDYSLW+ +K++Y K+IQAG RD
Sbjct: 16 GSEKLVLANKLAIVDAAEMDDVEAILLVKLYEKIFTTPEPEEDVFSFQNVANWHRQWLG-NVYEWAGKIRSVDMGKGGFQFMSPLQIERHISVFEDEYLSRFNNLPEMTDEELVSFLAQSHVEFILIHPFREGNGRVSRLLMDFLCSKAGKGTLDYSLWDEHKDFYIKSIQAGVNRD 191
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: A0A8E2Q2D9_9GAMM (Cell filamentation protein Fic n=6 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A8E2Q2D9_9GAMM) HSP 1 Score: 186 bits (473), Expect = 8.980e-57 Identity = 96/177 (54.24%), Postives = 124/177 (70.06%), Query Frame = 3
Query: 45 GSENGVLENLVEITDPTEMNIAETELLEALYMQVF---DAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAGQGRD 566
GSE VL N + I D TEM+ E LL LY ++F D+ T +F I WHR G VY WAG+ R++DM K +F SPLQI++ + FE +YLSRF LPEM DE+LV+F+A++HVEFILIHPFREGNGRISRLL+D + KAG LDYSLW+ +K++YFK+IQAG ++
Sbjct: 16 GSERLVLANKLAIVDETEMDDIEAVLLVKLYEKIFTTTDSKNGTFSFQNIANWHRQWLG-NVYEWAGKIRSIDMGKGGFQFMSPLQIEKNIRLFEGEYLSRFNNLPEMTDEELVSFIAQSHVEFILIHPFREGNGRISRLLMDFLCSKAGKGTLDYSLWDEHKDFYFKSIQAGVNKN 191
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Match: UPI0004001D36 (Fic family protein n=1 Tax=Oceanobacter kriegii TaxID=64972 RepID=UPI0004001D36) HSP 1 Score: 186 bits (472), Expect = 1.200e-56 Identity = 91/168 (54.17%), Postives = 125/168 (74.40%), Query Frame = 3
Query: 51 ENGVLENLVEITDPTEMNIAETELLEALYMQVFDAFPETLTFPTICRWHRPLAG*CVYRWAGQYRTVDMSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEFILIHPFREGNGRISRLLLDVMAVKAGAQPLDYSLWNRNKEYYFKAIQAG 554
E+GVL+N + +T +++IAETELLEALY V + P+ LTF IC WHR G +Y WAG+ R+V+MSK + FA+ Q+QRL + FE +YL F L +M D+ LV +LA +HVEFILIHPFREGNGR+SRLLL+V V+AG +P+D+ LW+ +K++YF++IQAG
Sbjct: 18 EDGVLKNSLGLTLKEDIDIAETELLEALYFGVLNDVPDELTFSDICTWHRRWLG-NLYEWAGKLRSVNMSKGDFHFAAAGQLQRLCEGFESEYLQNFGSLFQMDDDSLVGYLARSHVEFILIHPFREGNGRLSRLLLNVQLVQAGLEPMDFQLWDDHKDFYFRSIQAG 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig693.1.1 >prot_P-littoralis_Contig693.1.1 ID=prot_P-littoralis_Contig693.1.1|Name=mRNA_P-littoralis_Contig693.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp MSKPNIRFASPLQIQRLTKEFEDQYLSRFAELPEMADEQLVAFLAETHVEback to top mRNA from alignment at P-littoralis_Contig693:1..566- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig693.1.1 ID=mRNA_P-littoralis_Contig693.1.1|Name=mRNA_P-littoralis_Contig693.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=566bp|location=Sequence derived from alignment at P-littoralis_Contig693:1..566- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig693:1..566- >mRNA_P-littoralis_Contig693.1.1 ID=mRNA_P-littoralis_Contig693.1.1|Name=mRNA_P-littoralis_Contig693.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=312bp|location=Sequence derived from alignment at P-littoralis_Contig693:1..566- (Pylaiella littoralis U1_48)back to top |