prot_P-littoralis_Contig69.133.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.960e-40 Identity = 95/199 (47.74%), Postives = 128/199 (64.32%), Query Frame = 0
Query: 17 KARAVPNDTRLIDPEGMAVSGQLEPGLIVHACPVTEVGRRLPGI-------TQKTEVLAINSGQG------GGSAEPTLGPETPGSGVAQEYNSDEARRFGERLCEITASEWAVEENKDPTASLALTIIAAGNTVEDIPTRSLPSSVVEDEVKRLVAQGTIIKLTDSKQLLVWRSSRVPTDRPNRRPGKYERLLGEEPV 202
K A+ ++T L+DP M VSGQ E GLI+HA P+TEVGR L G+ ++ V+ INS +G G AEP + + GS + + +NS EA+ FGERLCE TAS+W + KD TA AL +I V I +P V D+VKRLVAQGTI+ L DS++LLV R++R P++RPNR PG+++RLLG+EPV
Sbjct: 495 KHYALKDETPLVDPGKMVVSGQWESGLILHAVPMTEVGRCLLGMGVIKKQRDKRKRVMVINSNEGXXXXXXGSEAEPVM--RSQGSQL-EGWNSKEAKEFGERLCEKTASDWVEAQYKDLTAKAALQLITDEVEVHKIGENDIPEGVDIDDVKRLVAQGTIMVLADSRKLLVRRATREPSNRPNRNPGQFDRLLGDEPV 690
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE) HSP 1 Score: 140 bits (353), Expect = 5.520e-34 Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 0
Query: 72 GQGG-GSAEPTLGPETPGSGVAQEYNSDEAR---RFGERLCEITASEWAVEENKDPTASLALTIIAAGNTVEDIPTRSLPSSVVED--EVKRLVAQGTIIKLTDSKQLLVWRSSRVPTDRPNRRPGKYERLLGEEPVRTYVPLELRPWVMDCAHKEVVHLDD 227
G GG G A P L P+ P QEY+ ++ + FGE+LC+ TAS+WA + +D TA LA+T I + + +P V D E+KRLV+QGT++ L +SK LLV + + P + PNR PG++ER +GEEPVRTYVP LRPWVMDCAHKE VHL +
Sbjct: 350 GSGGRGPAAPPL-PQIP----LQEYDEEQTQAAIEFGEKLCDKTASDWADIQEEDDTARLAITAIEGHADPKRMKEGDIPEGVDVDLDELKRLVSQGTLLVLPNSKHLLVRKELKAPAENPNRNPGQFERWVGEEPVRTYVPRMLRPWVMDCAHKEAVHLGE 506
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Match: A0A6H5JKZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ8_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 4.260e-16 Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 181 VPTDRPNRRPGKYERLLGEEPVRTYVPLELRPWVMDCAHKEVVHLDD 227
+P +RPNR PG+YERLLGEEPVRTYVP+ LRPWVMDCAHKE +HL +
Sbjct: 1 MPAERPNRNPGEYERLLGEEPVRTYVPMLLRPWVMDCAHKEAIHLGE 47
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 2.670e-15 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 0
Query: 121 KDPTASLALTIIAAGNTVEDIPTRSLPSSVVED--EVKRLVAQGTIIKLTDSKQLLVWRSSRVPTDRPNRRPGKYERLLGEEPVRTYVPLELRP 212
KD TA LA+T I + + +P V D E+KRLV+QGT++ L +SK LLV + + P + PNR PG++ERL+GE+PVRTYVP LRP
Sbjct: 478 KDDTARLAITAIEGHADPKRMKEGDIPEGVDVDLDELKRLVSQGTLLVLPNSKHLLVRKELKAPAENPNRNPGQFERLVGEQPVRTYVPRMLRP 571
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Match: A0A6H5J755_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J755_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 5.630e-7 Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 173 LLVWRSSRVPTDRPNRRPG-KYERLLGEEPVRTYVPLELRPWVMDCAHKEVVHLDD 227
LL+ + S PT R R G K+ERLLG+EPVR YVP LRPW ++ H E HL +
Sbjct: 43 LLIKKPSEAPTSRAQRHSGGKFERLLGDEPVRLYVPFLLRPWALNAVHTEGCHLGE 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig69.133.1 ID=prot_P-littoralis_Contig69.133.1|Name=mRNA_P-littoralis_Contig69.133.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bpback to top |