prot_P-littoralis_Contig69.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.61.1
Unique Nameprot_P-littoralis_Contig69.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length219
Homology
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BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 8.320e-39
Identity = 123/154 (79.87%), Postives = 132/154 (85.71%), Query Frame = 0 
Query:   69 ETPSPGVIGGAALVGAGIGALLSGPLVAIGLGGAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHSTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTARAGKAFGGAMDGVTNAMSKKD----GEGPAKK 218
            + P  GV+GGAALVGA  G LLSGPLVAIGLG  AAA  LR+DQAGDVARSTGQAGLAVVEKGKEIN QYGV +KV+GAAHST+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +RAG+AFGGAMD VTNA+SKKD    G G  KK
Sbjct:   14 DAPPAGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLRRDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGEAFGGAMDSVTNAVSKKDDGQDGWGATKK 167
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BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Match: A0A0G4EAI7_VITBC (MIT domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAI7_VITBC)

HSP 1 Score: 57.4 bits (137), Expect = 2.880e-6
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:   79 AALVGAGIGALLSGPLVAIGLGGAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHSTY 152
            A  +GA  G LL GPL  +  G  AA    R D+AG+VAR  GQ  L  V+K KE+N +Y +TEK   AA +TY
Sbjct:  124 AGAIGAVAGGLLLGPLGLVAGGAGAAYAATRGDKAGEVARGVGQGALGAVDKTKEMNQRYHITEKTTEAAKATY 197
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BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Match: A0A835YVL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.570e-5
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:   72 SPGVIGGAALVGAGIGALLSGPLVAIGLG--GAAAALTLRKDQAG-DVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAA 148
            SPG++ GAA  GA +G +LSGPL+A+GLG  GA AA+T      G D+ARS G+      +K KE+  ++ V  +V+GA+
Sbjct:   16 SPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGAS 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTN9_ECTSI8.320e-3979.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4EAI7_VITBC2.880e-647.30MIT domain-containing protein n=3 Tax=Vitrella bra... [more]
A0A835YVL1_9STRA2.570e-545.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:279800..286937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.61.1mRNA_P-littoralis_Contig69.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 278651..286937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.61.1 ID=prot_P-littoralis_Contig69.61.1|Name=mRNA_P-littoralis_Contig69.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MGVSRNGSESPHNRAPPRQNDSGREADISNKSQTPFFSRSAPLHHNDPNT
VHTMAPTEEQSKPGGGEGETPSPGVIGGAALVGAGIGALLSGPLVAIGLG
GAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHS
TYEKAKDVNEEHRVVDKVKAGASRAWGRIREVDREHRLTARAGKAFGGAM
DGVTNAMSKKDGEGPAKK*
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