mRNA_P-littoralis_Contig69.61.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig69.61.1
Unique NamemRNA_P-littoralis_Contig69.61.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 7.280e-36
Identity = 123/154 (79.87%), Postives = 132/154 (85.71%), Query Frame = 1 
Query:  205 ETPSPGVIGGAALVGAGIGALLSGPLVAIGLGGAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHSTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTARAGKAFGGAMDGVTNAMSKKD----GEGPAKK 654
            + P  GV+GGAALVGA  G LLSGPLVAIGLG  AAA  LR+DQAGDVARSTGQAGLAVVEKGKEIN QYGV +KV+GAAHST+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +RAG+AFGGAMD VTNA+SKKD    G G  KK
Sbjct:   14 DAPPAGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLRRDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGEAFGGAMDSVTNAVSKKDDGQDGWGATKK 167
[Close]
BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Match: A0A0G4EAI7_VITBC (MIT domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAI7_VITBC)

HSP 1 Score: 57.4 bits (137), Expect = 2.640e-5
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 1 
Query:  235 AALVGAGIGALLSGPLVAIGLGGAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHSTY 456
            A  +GA  G LL GPL  +  G  AA    R D+AG+VAR  GQ  L  V+K KE+N +Y +TEK   AA +TY
Sbjct:  124 AGAIGAVAGGLLLGPLGLVAGGAGAAYAATRGDKAGEVARGVGQGALGAVDKTKEMNQRYHITEKTTEAAKATY 197
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTN9_ECTSI7.280e-3679.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4EAI7_VITBC2.640e-547.30MIT domain-containing protein n=3 Tax=Vitrella bra... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:278651..286937 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTN9
Model size1806
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.36e-39
EggNOG OGs2E68G@1|root,2SCZE@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-28_003380.1
Cds size657
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791431.5441628-UTR-P-littoralis_Contig69:278650..2797991680791431.5441628-UTR-P-littoralis_Contig69:278650..279799Pylaiella littoralis U1_48UTRP-littoralis_Contig69 278651..279799 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791431.5575087-CDS-P-littoralis_Contig69:279799..2799131680791431.5575087-CDS-P-littoralis_Contig69:279799..279913Pylaiella littoralis U1_48CDSP-littoralis_Contig69 279800..279913 -
1680791431.567659-CDS-P-littoralis_Contig69:280465..2805791680791431.567659-CDS-P-littoralis_Contig69:280465..280579Pylaiella littoralis U1_48CDSP-littoralis_Contig69 280466..280579 -
1680791431.580706-CDS-P-littoralis_Contig69:282830..2829231680791431.580706-CDS-P-littoralis_Contig69:282830..282923Pylaiella littoralis U1_48CDSP-littoralis_Contig69 282831..282923 -
1680791431.6201005-CDS-P-littoralis_Contig69:286601..2869371680791431.6201005-CDS-P-littoralis_Contig69:286601..286937Pylaiella littoralis U1_48CDSP-littoralis_Contig69 286602..286937 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.61.1prot_P-littoralis_Contig69.61.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig69 279800..286937 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig69.61.1

>prot_P-littoralis_Contig69.61.1 ID=prot_P-littoralis_Contig69.61.1|Name=mRNA_P-littoralis_Contig69.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MGVSRNGSESPHNRAPPRQNDSGREADISNKSQTPFFSRSAPLHHNDPNT
VHTMAPTEEQSKPGGGEGETPSPGVIGGAALVGAGIGALLSGPLVAIGLG
GAAAALTLRKDQAGDVARSTGQAGLAVVEKGKEINAQYGVTEKVEGAAHS
TYEKAKDVNEEHRVVDKVKAGASRAWGRIREVDREHRLTARAGKAFGGAM
DGVTNAMSKKDGEGPAKK*
back to top

mRNA from alignment at P-littoralis_Contig69:278651..286937-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig69.61.1 ID=mRNA_P-littoralis_Contig69.61.1|Name=mRNA_P-littoralis_Contig69.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8287bp|location=Sequence derived from alignment at P-littoralis_Contig69:278651..286937- (Pylaiella littoralis U1_48)
ATGGGCGTTTCGCGAAACGGTTCTGAGAGTCCGCACAACAGAGCCCCCCC
ACGGCAAAATGATTCTGGAAGAGAGGCAGACATCTCAAACAAATCTCAGA
CACCATTTTTCAGTCGTTCGGCTCCTCTACATCATAACGATCCAAACACC
GTTCATACCATGGCTCCGACAGAAGAACAATCAAAACCGGGTGGGGGAGA
GGGGGAAACTCCATCGCCTGGGGTCATCGGGGGAGCTGCCCTGGTGGGAG
CCGGCATTGGCGCGTTGTTGTCTGGGCCGTTGGTGGCGATCGGCCTAGGT
GGAGCTGCCGCTGCCCTAACCCTGAGGAAAGATCAGGTGTGTGTGTATGT
GTGCTGCGTGTAAGAAGGGAGGCCCTTGCTTGCGCCGGCGGTTGTGCACA
TGGAGAGTGACTCTGGCTCTGTATACGTGCATGCGCTTATGTGTCCTCTT
CTGTTGTAGCGCATACCGCGGGAACCGTTTGCGAGCAGGGTCGGTGTACT
GTTGTTGCTGGTCCTTTGTACGAAGTTCAACTGCTGTGTGATCCTCCTGT
CCCCTTCAAAAACTAGGACGGAGGAATAGGAATCCCCCTAGGTTTTTGGT
TGCACAGGATCATCACCATCATCATTACCACCGTCATCAATATCATCGGG
AGTTCTCTAAAAACCAAGTCTTGTATCAGTTCTTGTGGTATCGGTGTGCC
AGTCAACAGCAGGGAAGGCCTGTTTTATGGCGTTTCCCACACCGACAGCA
CACCCAAAAGCATCCTGGTATGACACAAGCAGTACACTTGTACACTTCTC
ACTTTCACTTATTCAGAATTGTACCTAGCGTTGTTGGTCTTGGTTGCGCC
GCCTCAGACAGACTCGCGCTTCTCCACCTCCGTCTCTCCCTTCCGCTCCG
TAATCCTCTTCACACATAACGTGCAGCAGCAGGAGTAGTGTACTCCGTAA
TCCTCTTCACACATAACGTGCAGCAGCAGGAGTAGTGTACTTCGAAGTAG
GGTTAGGGTTAGGGTCAGGGTTCGGGTTAGGGTCCTTCAGTACGGTACGG
GCGCTCGCCAGGCGGCGCGCCTACTGTCATGTTCCCAATTCGGACTGGCA
GGAGAAAAGAAAGAAATACAGCAGTATGGCTACAACAGCTGCCGCGCTTT
CTCTTTGGTCTTTCTCGAGGCATGATGGTATACTTCGGTATGATACATAA
TTGTCTGTAACCCCACTTGAGATATTTGCACCTCCCACGTGTCTTTGTTA
TCGTGCACCCCCTGACCCGCTTTTCTATAAACTTTGCCCGAGGCTCTACT
TCAATTCTACGCTCCTTCCGACCCAACCCTACGCTAACCCCAACCCGAAC
CCTAGGCCGACCTGTGTCCGCAAGGAGCCTTTGCGCTGCTCCGCGGCGCG
TTTGGTGTGGTTGGAAAAAAACGCACCTGGCAGGTGCAGATGGGGTTACC
CTCGAAGTACTACCGAGAAGTTCGAAGTAGTATAAATGCTTTTCAATATA
TCAATGCCCTCCACTTTCTGAATACCTCGCAGCACCGCTCTTGTTTGCCT
CCCTCCCTATCGACCGACCCAACCAACCCTAACCCTACGTTTTACTCTGA
CCTAACCCTAAACCCAAGGGGAGGTAGAAAGCGTGGTTGATGTATAATCG
AAAGGTGCTATGATGTGATAGGTCATCGTTGCAGGAAAATTAAAAAGAAA
ATGAGCTCAACCCACAAGCAGGTTCTGGGCCAATGAGAGCGTCCGAATCC
GTGTCAGACAAAAAAAAAAGGCGAAGGAAAATTTATTTCCGTGGAAAACG
CGAGCCCATCCTCCATGACAGCAACAGCAGTAGGAAACAGCAGAAAAAAG
ACCGGTTACAGCAGTCGCCACGAGTAGCCTCCTCCCTCCTTCTTCATCGT
TATCCTTGACGCAACAATAAAACCGACAGCAGCGGGCCATGCCCACGTCC
CTTCACAGCTTCACTAGCATAACATCCGTTGCGCCGCTGCCATGCCGCCA
TGACGGCGTTGCTTGTCGTGCATAGGACTAGAGCAGCACGGCAAGCATTC
GTGAGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCGATTTTTCTACTAAAAATAATTAATGGTGCCATGACCGC
GTCTTCCCCCATTACTGCAGCCTCACTCAGAAGCATGGTCTTTCCGCTGC
TGTCATGCCCACACCACGGCGTTTTAGTCGCATCTCGCGCACAGCCTTCG
TGGTGCCGCCACCGATGTCGTTTCGCAGGTGTCTTGGTTAAAACACGTGT
GCCTAGCTCATTTCTTTGTGCTCCGCTATCACGCAGAGATGCCTGCGGAT
GGTTATGTTCTGAATCACAAACATGTGAGATACCACTGCTGTGTCCCGGC
TAGAGATCACATTTTTTTTCATTTTCCTAGAAACACATGAATATGGTCGC
CTCTCTACAGATTTATGAGTTGCGCTCACACGTGCAGATTTTAGAGTTTC
GCGAGCACTCTGCAGTCTGCGCTCAAACTAGCGCCCTGCCAATCCAGGCC
GTGGTCACAAATCTAACCAGGCACATCATCGTCCTCTTGTCATCCGAGGA
AATAAAAATAAACCCCCACAAAACGAACGGGGATACTGCTGTCCCGCCGA
AAGGGGGTATACCAGTACCGTTTCTGTGTGTCAAAACAAGAAACTGTTGC
TGTACATGCAGACTCGGAACTTAGAACGGCACATGTTTTGAATTCATCAA
GTCGTCCTTACGTATAGGTAAGCATTGTCCTCTTGCTCTTACCCAAAGAC
TACCGTTTGTTTTTGCAGGCTTGTGTGACACAGCAGGCCAATGAATGCCT
CGTACCTCTGGGCGCAGACGGACACGCTCAGGGTTGTGAAAGCAGCGTTT
GTCGATCGCTTTAGAAGGCACACCCCAGTGGTTGCATTTTTGTATTGGGG
TTAAGAAAACTCATCGCTGGAGGTGCCTTTCACTTCCGCAAGGGTTTTGC
TATCTAGTGCCACCCGTTTGTTTTAGCGCAGCTCACAGGACACCAGCTGC
AGGAGGTGTGATATTGTGAGGGGGTGATCTCTTAGATGAAAGGTCTGCTG
CCGCGCCACACTTCCTTCCAAAAGCGGTGTGAAATGATATCTCCGATATC
TGCTGGTCGACATTCGACGAAGGAAAATAAAATAAAAATAAAATAAAAAT
GAACGTTCGAAAACAGGGGTGGTTTAGAACATCGCTTATATGGATGAGAG
ATGATAGCTCTCTCCACGCACAAGAGTATACCATTCGCACATCTTGTTGA
TATCGTAGCACAGCGATGATGCAGACGACGGTGAATAGTTGTTAGAATAT
GACCCTCTTAAGACCTGTTGTTGCTTTCGTAGCGAGCCGCAGTCTGAGCG
AGGAGCACCAGCCGTGGCAAAGGTCACGATCCCGAATGATATTGGAGGGG
GGAAATCATGCAAATTTGGAGGGGGGGCGAATTTTGGAGGTGTTTCAACG
TGTTACCCATCCTGACTTGTGTTGACAATTAAAAGCAAGTGCGGAGCCAA
CGCACGTGGTGATGGCCGGGCGCGGGGGGGGCGTGATGATAATGAGGCTT
GACTTACAAGGGTATGGAATCTTATGCCGCCCGTATGACGAATAGCTTTT
ATTCAGGCGTTTAAAAAAAAACAAGTCACACGTGTGTGGTGTGGTGTGTT
TTTCGCTACTGCAGTTGTACAGTTGTACTCGTGTGGGTTTTTTTCTTGTG
AGAATGTGCCTTTTATCTTATGCAATCCACGGGTGTTTGCGCGTGTGTGT
TGTCATCCCACTTGATCTGGGCGCACCAGTCGTGGTCACACTGGCTATTC
CAGAGCATTACATAATGTCGTAAATATTGTAAATGCGCGTAAAAGTATAA
AAATATGGAGGGGGTGGGGCGGGGGGGCGGCGCCGCGTGAGTATCATGGG
TGCACAAGTGATACAGCAAGAGTAAATTAACCCCCCATATTTGCCCTTCG
TATCTTCTCGACAGGCCGGGGACGTCGCGCGATCTACAGGCCAGGCCGGA
CTTGCCGTGGTCGAGAAGGGGAAGGAGATAAACGCCCAGTACGGGGTCAC
CGAGAAGGTAATAAACTGGACGTACGAGCATGATACGAGTACATGCTTTC
ACTTCCTGGTCCGCCCATGCCCCGCAGAAAACAAGAATAACACGTACTTG
TAGTACCTGCTGTAGCGAGCGAGGCGACCACAAGGCGGTGGTCTCGCTTC
GAGCAGTTGGTAGTCGGGATGGGAGCACGGACATTGTTGCGCCGGCCCTT
GGCAACGATTGAAATATTGTCGACGATGGAATCGGCTTTTCGACAGATGG
AAAGTGGCTTAACGTCGGTATCCTACAGGTGTAACTTCCGTTCATAATCA
TTGCAGTAGTACAGGCACCCCTCTTAGGAAACTACTTTCAGCTGTGGTCA
GCCTGTACCCACGCAAAAGCGCCCCCCCCCTTTGACACTGGTTGGATGAG
CGAAAGGGACTCAAGAAGGCAGAGATCGGAACGGGTTATCATGCGAACGC
GACATACGATCACACATGCAGTATCAGTCATGTGTTTACGTTGGATTGAT
ATTGGGAGGCAGCAGTTAGTAGCCTTTCTGCTCTACGAGGAGAGTGGGCC
CTCGACAGCAAACTCTGAGCTTGTTGGATCATCTCATCCCGCTCCTGCGA
CGAGTTCTGCAACGCTCTTCTAGCAGCGCAGTCGCGAGAGTGCTCCGTTT
CTACAGCACACTCCTCGTCGGGTTGGTTGGCCCCCGCGATCCCCTTGGCG
CATGCCAAAAGCGCATTCAGGGTACATCCGCGTCGGTCAGGTGGTATTGC
TGCCGCGACTGCGATAGTGTGCGCCCGCCTCGAAGTTCGGGCACCTTTCC
GACGACCCTACGGTGCACGCTTATGCCCCCGCAAGTGCAGGGACGTCCCC
GCTGCCACCGCTGCTGCTGCTGCTGCTGCTGCCTACTACCATATTTGCTG
GTGTACCTGGCGTTGCTGCTCCCGCCGCTGCTGCTGTCACGGCTGGGGCC
GCTGCTGTCACCGCCGAAGTCGGTCGTCCCGGAGGAGACCGTGGTGCCGG
GAGGGTCCCTTCCGCGCTCCCTCCGGCTCCGTTTCCGGGTCTTGCCGCTG
GCGCTTCGCGCGCTGCGGATGGCGATGGGAAGCCCGCCTCTGACACGTTG
AGGCTGGACTCCCTGTCCAAGTCTTCCAGCCTCCCAATGCCTTGACTTTA
CGCGTTCTCCCCGCTTTCGCCCCCCCTCCCCCCTCTTCTCGGCAATATGA
TGGGGGGCAGTTGGTGCGAGAGTTCGTTAGACGCAGATGTTGTGTGTCGC
CGAGCGACGCTGCGGGTGGTCAGTATGGACCAGCTTGCGGTGGGCGCACG
CACGGAGTCACGGGGGTGGCTGACGCCGGCCCCTACACAACAGCAGTTTT
GTGCTTTTCGCCTGCGACTTATTGCCTCTCTTTACTCTGCAGACGGCTGG
CTTGAGCGGCCGCACCTCCCAAAGTGGGGAGGGGGGGGGGGGTGAACCAT
ACCAAGTATCTTATGGAAATGAATATCCAGGGTTTGCTCTGGTCAAGGAC
GTGGCACGCCCACGAGACCGCTTCGACCCACAACGATGGATAGATTGGTG
CGCTCGCGTACAGTTCAGTTGCTTGGGTGCGGGCGGCTAGGGCGGAATGT
TGATCAGTGCTTACGCTAGTTCCGGCCGCACCTGGCTGCTGGCTTGAACT
CTTGTTTGACTCCACCCTTGCGGCAAAATGTTTCTGAAATGTCCTCGGAA
AAAGCTCTCCCCCGTTGTCTGATTGAACAGCCATGATGGCGGATGGTGCG
CCGTCCGCCCGCACCTCCGCTAGGGATAATTCGAACGCACCGGCCGCGTC
CGGCTCTTCTCTCAGAGAAAACAAGCTGTCGCGGGAACCGCGTGCAGTCA
TCCCGCACCTTGAAACGTGTACAATTCCCCCCCAATGCTCTGTACAATTT
TACTCTCTTTTTGAGATCTCCTGGTGGTTTCGTAGCAAGCCGCGGTGTGT
GCGAGGCGAGGAGTACCGGCGGTTACGAAGGTTATGACCCCGGACGGTAT
TGGACGCAAATTTTTGCTTTTTTTTTTTGGGGGGGGGGGGGGCTCCGCCG
ATCGCGTTGTCCCGCCCGCACGACTCACAAAATTTTGCGGGCATAAAAAA
AAACAGCGCCAGAGTAGCACATGTGCGACGTGCACGTGCCACCCATCAGT
ATTGGAGCGCATCCACACTGCTGGAATTGGCGCCCTCCTGATTCCAGATT
TTACGCAAATTATAGTGTACACACGCTGCTTGTTTGGCGTGATGTGCGTT
GACCGCAGGTCGAGGGCGCTGCTCACAGCACGTACGAGAAGGCAAAAGAT
GTTAACGAAGAGCACCGAGTTGTCGACAAAGTCAAGGCCGGGGCATCGAG
GGCATGGGGGCGTATTAGGGAGGTGAGGGTCCCTCTGTTCGCCGGTAGTT
GCGTTCGAGCAAAGAATGATCGTGTCGAGAATTCTACACGTAACGGTTCG
GTAGATACGCATGATGAGGTGAACCAAATATGTCGGGGATGACACATACG
CCGCTTGAGTCGGCGCTACCTTGTACACCTACCAACTCCGCTGTAGCTCG
CTGAGTGGTCTGGATGGGCTACCTCCGTCAAACTCGCGGGAAGTGATATT
TTGGGTCTCGTTTTGAAGTGTTGTTGTCTCGTCCGCGAAGCGAGGGATCT
GCATATACACCTGGTACATACATACACCGACGCTTGCACATACATGCCCC
TTTTTGCTGGGTTTTCCTCGTCTGATCTCGAAAGTGTTCGTGGAATTCGC
ACGATATGAGTAGGGACGGGGACGAATGATAGCGCGGTGTTTGGAAAACG
GGACGAATTTCTTTTGTACAGCTTCGCCCCTTTTTGTCGACTTCCGTACC
GTCTCTGACTCCCTTGTTGCAACGCACGATCGCCGACTTTCGGTCTCATT
GTTTCGTCTTCGTGGGTTGGGCAGGTGGACAGGGAACACCGCTTGACCGC
CAGGGCTGGCAAGGCTTTCGGGGGAGCAATGGATGGAGTGACCAATGCCA
TGTCGAAAAAGGATGGCGAGGGACCCGCAAAGAAATAGCGCACGTGTATT
TGATTAACCTTTCCCGTATTCATCTGGATGCGAACCTGCTGTTTATACGT
ACATACGAAGTACATGTATCCATGTGACCATCTTTGCCTCTCTTTATTGC
AGAGGAAACAACGGCGTGTGCCCCGAGGTTACATGGGTATTGATAGCCCC
AGCTGGAAAACTTGTATTTTTAGAAAGTGTGTACTCCGTGCGTGGCTAGG
TCCAGCGTGTGGTGTGAACGTTTTGCGTATCGTGAGGAGGCTTTTCGTAT
GGATGGCGAATTTTTTTTCTCTTTTGGCTGAGACCCGATTCCGCACGATG
TCCGCATACTGTAGACGTTACATATATACGGCCTGTAGTATTCCAAAGGT
ACAGAGCAATGCATCTGGAGGCGTCTACAGTGTAACGTGCTACGGTTGTA
CGGTTATTTAAACGATGAATTACATTACATTTACACGATAATGGGGGCGC
ATGGGGACGTGTGTATGTGGTTTGCCCCCCCACCTCCTTGTTGGTGGAAA
TGCCTCCTCGCCTGGTGGCGCATTGCCTAGCTATGAGTTCGAGTTTGCGG
TAGAGTAATTGAGTAAACAGTTGTGGGTTTTGAGGGTCGTGTTGTGTTGG
TTGTGTGTGTGGGGGGCAGTCGAAGGCATCGAGAAATCATGTACCAAATC
TTGAGCGTTTTACACCGTGGTTTGCCCAGGAACGAGGTTACAGAAGTTCC
TTTTCGCAGTGAAAAGGTGCCCGCAGTTTTCTGATTGGTCAACTTAAAAG
GTGCCCGCAGTTTTCTGATTGGCCAACTTTTTTGAAAAGGAGTCTTCTGA
TTGGCCACAAATCCCTGGTCGACATGTGACGTCATCCACGGCGGCGTCAC
TTTGTTCTAAAAAAATTCAACTTGTAATGTAATCTGACGGTGAACAATGC
TGTTGTTGAGTCCGCTTACTGTTGATGATTGGTCAATTTTGACTACTACA
TCCGTTCTTGTTGAACAACGCTGCTGCTTTGTGCCCCGTTTACAGCAGCA
GGATCACATGTGCATAGCATAAATCACGATGATCTAACGTAGTATCTTCT
ACATATATCTGGTATACGTGTACCGGTCGCCCCGGTGGTTCATTTGGTTA
TCCACGCAACCTTTTGACATTCACGCGTGAGTTCGAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig69:278651..286937-

>mRNA_P-littoralis_Contig69.61.1 ID=mRNA_P-littoralis_Contig69.61.1|Name=mRNA_P-littoralis_Contig69.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig69:278651..286937- (Pylaiella littoralis U1_48)
ATGGGCGTTTCGCGAAACGGTTCTGAGAGTCCGCACAACAGAGCCCCCCC
ACGGCAAAATGATTCTGGAAGAGAGGCAGACATCTCAAACAAATCTCAGA
CACCATTTTTCAGTCGTTCGGCTCCTCTACATCATAACGATCCAAACACC
GTTCATACCATGGCTCCGACAGAAGAACAATCAAAACCGGGTGGGGGAGA
GGGGGAAACTCCATCGCCTGGGGTCATCGGGGGAGCTGCCCTGGTGGGAG
CCGGCATTGGCGCGTTGTTGTCTGGGCCGTTGGTGGCGATCGGCCTAGGT
GGAGCTGCCGCTGCCCTAACCCTGAGGAAAGATCAGGCCGGGGACGTCGC
GCGATCTACAGGCCAGGCCGGACTTGCCGTGGTCGAGAAGGGGAAGGAGA
TAAACGCCCAGTACGGGGTCACCGAGAAGGTCGAGGGCGCTGCTCACAGC
ACGTACGAGAAGGCAAAAGATGTTAACGAAGAGCACCGAGTTGTCGACAA
AGTCAAGGCCGGGGCATCGAGGGCATGGGGGCGTATTAGGGAGGTGGACA
GGGAACACCGCTTGACCGCCAGGGCTGGCAAGGCTTTCGGGGGAGCAATG
GATGGAGTGACCAATGCCATGTCGAAAAAGGATGGCGAGGGACCCGCAAA
GAAATAG
back to top