mRNA_P-littoralis_Contig69.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE) HSP 1 Score: 269 bits (687), Expect = 2.490e-84 Identity = 186/256 (72.66%), Postives = 200/256 (78.12%), Query Frame = 2
Query: 32 MLACRRTSTLAVRACVRRCHGDVFFGGGRRSANKPGVD-ISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEE------AADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLD 778
M+ACRRTSTLA +C G R+ A++ + + R SSLPDH+VVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVT DDADSVAAFKDF+AEAV+ E AA+ XXXXXXX XXXXXX XXXXXXXXXXXXXXXXXX VE+ PVS E LVFKRDWGSGV GS LAHR+SAEQKKYV+RFGSTLQQPLD
Sbjct: 1 MMACRRTSTLAASVLATQCRGT------RQVASRRSAELVVNTRSLSSLPDHIVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAPAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPVSSQE----LVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLD 246
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI) HSP 1 Score: 224 bits (570), Expect = 3.450e-67 Identity = 160/200 (80.00%), Postives = 162/200 (81.00%), Query Frame = 2
Query: 203 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAV--EEEAA------DTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLD 778
ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVT DDADSVAAFKDF+AEAV E EAA XXXXXXXXXXXXXXXX XXXXXXXXXXXX VE PVS PE LVFKRDWGSGV GS LAHR+SAEQKKYVERFGSTLQQPLD
Sbjct: 25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVERPPAPVSSPE----LVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLD 220
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.920e-37 Identity = 104/215 (48.37%), Postives = 128/215 (59.53%), Query Frame = 2
Query: 158 RWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEE----------AADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGL-VFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQ 769
R ++LP H +VGMPALSPTM HGN+ W K GDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV G Q I VG PI +T +D DSVAAF+ ++A A +E AA T XXX XXXXXXXXXX E A+ P++ +G +WG VS SPL +RLS EQK Y RFG+TLQ+
Sbjct: 32 RAMATLPSHTLVGMPALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXXVAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKA---TEAAKSAQKAPDAPAGAPTASVNWGQRVSRSPLYYRLSQEQKLYSSRFGATLQE 243
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.990e-35 Identity = 119/207 (57.49%), Postives = 143/207 (69.08%), Query Frame = 2
Query: 158 RWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPE-STSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPL 775
R FS+LP H VVG+PALSPTM G I W K GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVEAG + +PVG PI V D+ D VAAF DF EA XXXXXXXXX XXXXXXXXXXXXXXXXXXXXX V+ P+ +T+ FKR WG+ VS SPLA +++ +Q +Y+ ++GSTLQ P+
Sbjct: 36 RAFSALPPHEVVGLPALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAX--------XXXXXXXXXTAAPVVTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADVAPPQVTTTTYAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A0P1AE60_PLAHL (Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE60_PLAHL) HSP 1 Score: 135 bits (339), Expect = 3.790e-33 Identity = 77/209 (36.84%), Postives = 108/209 (51.67%), Query Frame = 2
Query: 155 ARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLDL 781
+R FSS P H +VG+P+LSPTM GN+ W +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+ GT++IPVG P+ V +D +SVAAFKDFK + A + A+ S P S + VF+ WG G+ S ++ L +Q+ Y+ ++G T P+ L
Sbjct: 23 SRGFSSYPPHDIVGLPSLSPTMETGNMSKWNTKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVVEDQESVAAFKDFKLDEASVAPATPVSSKKPSNKSRSEPAMPQPSQKASPPMEVSPPTKTIEHTSTVLTNAKA--SSPVSATTTVFEEKWGFGIKKSAISTSLLKKQQLYIAQYGVTGMTPVAL 229
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A8K1FAL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAL3_PYTOL) HSP 1 Score: 133 bits (334), Expect = 1.540e-32 Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 2
Query: 119 RSANKPGVDISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVE 466
RSA+ R F+S P H VVG+PALSPTM GN+ SW +EGD+I+AGD++C++ETDKA VDF+AQDD F+AK LV GT++I VG PI VT ++ D VAAFKDFK EA E
Sbjct: 8 RSASSARRSALLLRGFASYPAHEVVGLPALSPTMEQGNLASWRLKEGDKISAGDIICQIETDKAVVDFEAQDDMFLAKILVPEGTENISVGQPIMVTCEEEDDVAAFKDFKVEASE 123
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A7R9WUM2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUM2_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.970e-32 Identity = 116/261 (44.44%), Postives = 152/261 (58.24%), Query Frame = 2
Query: 2 HPPPSSQYNNMLACRR-TSTLAVRACVRRCHGDVFFGGGRRSANKPGVDISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVS-GSPLAHRLSAEQKKYVERFGSTLQQPLD 778
H S N MLA R ++ ++R+ V R G R +S+A +LP H+VVGMPALSPTM G + W +EG E AGD + ++ETDKA++DF+AQDD ++AK L +AG +D+PVGTPI VT ++ + VAAFKDF A A E EAA XXXXXXXXXXXXXXXXXXXX X XX +E A PV WG SP+A L+ +Q++Y+E++G+T Q+PLD
Sbjct: 45 HHSQSDHDNTMLAISRLAASSSLRSGVTRISNRAAAIGCRS------FHVSSALQDDNLPYHIVVGMPALSPTMDQGTLAEWYLEEGSEFIAGDALAKIETDKASIDFEAQDDGYIAKILKDAGAEDVPVGTPILVTVEEEEDVAAFKDFVAPAAEPEAAAAPXXXXXXXXXXXXXXXXXXXXVVAAAAXPVVDAVXXPSAADMLE-AVAPV----------LSTGWGRLAQINSPIAKSLAKKQQEYIEKYGTTGQKPLD 288
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A425C5Z6_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C5Z6_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.990e-32 Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 2
Query: 146 ISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAA 478
+ +AR FSSLPDH VVG+PALSPTM G I W KQEGD I+AGDVVCEVETDKA VDF+A DDS++AK LV++G+ ++ VG PIFVT + + +AAFKDF A+A +E A
Sbjct: 36 VLSARTFSSLPDHEVVGLPALSPTMEVGTIAKWNKQEGDPISAGDVVCEVETDKAVVDFEATDDSYLAKILVQSGSGEVAVGKPIFVTVMEEEDIAAFKDFSADATPDENA 146
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: F0WT72_9STRA (Dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WT72_9STRA) HSP 1 Score: 132 bits (331), Expect = 6.290e-32 Identity = 82/214 (38.32%), Postives = 109/214 (50.93%), Query Frame = 2
Query: 170 SLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVE-----------EEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFK-RDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPL 775
S P H VVG+PALSPTM HGN+ W +EGD I +GDV+CEVETDKA VDF+AQDD F+AK LV GT+ I VG PI VT ++ + VA F DFK E E E ++D V+E + P + + S +WG GV SPLA L+ +Q++Y+E++G T + P+
Sbjct: 22 SYPPHEVVGLPALSPTMDHGNLAKWRLKEGDRINSGDVICEVETDKAVVDFEAQDDMFLAKILVPEGTEQISVGQPIMVTCEEEEDVAKFADFKVEEKEVAAENVDVPQKESSSDDAQYSLPSSPQKIPENVQPQSTQNADEMHLESQKAETSPPRTPVQETKQPPKEGFTQSPFPQSIENWGLGVKKSPLAFSLAKKQQEYLEKYGFTGRFPI 235
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A0W8DVI9_PHYNI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVI9_PHYNI) HSP 1 Score: 131 bits (329), Expect = 6.420e-32 Identity = 78/209 (37.32%), Postives = 107/209 (51.20%), Query Frame = 2
Query: 155 ARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLDL 781
+R FSS PDH V+G+P+LSPTM GN+ W +EGD I+AGD+VCE+ETDKA VD++A DD ++AK L+ G ++IPVG P+ V D+ +SVAAFKDFK E A V + + S P TS VF+ WG G+ S ++ L +Q+ Y+ +G T P L
Sbjct: 23 SRSFSSYPDHEVIGLPSLSPTMETGNMSKWNMKEGDAISAGDIVCEIETDKAVVDYEATDDMYLAKILIPEGAENIPVGQPMMVVVDEEESVAAFKDFKLEDAPSAPA------------------APALSAEEKPPKKEDVPVDAKTHEPVVPQDFLAASAP--TSSAVFEEKWGLGIKKSAISTSLIKKQQAYIALYGITGMTPAAL 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig69.7.1 >prot_P-littoralis_Contig69.7.1 ID=prot_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=251bp MLACRRTSTLAVRACVRRCHGDVFFGGGRRSANKPGVDISTARWFSSLPDback to top mRNA from alignment at P-littoralis_Contig69:36109..40045- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig69.7.1 ID=mRNA_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3937bp|location=Sequence derived from alignment at P-littoralis_Contig69:36109..40045- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig69:36109..40045- >mRNA_P-littoralis_Contig69.7.1 ID=mRNA_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=753bp|location=Sequence derived from alignment at P-littoralis_Contig69:36109..40045- (Pylaiella littoralis U1_48)back to top |