mRNA_P-littoralis_Contig69.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig69.7.1
Unique NamemRNA_P-littoralis_Contig69.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 2.490e-84
Identity = 186/256 (72.66%), Postives = 200/256 (78.12%), Query Frame = 2
Query:   32 MLACRRTSTLAVRACVRRCHGDVFFGGGRRSANKPGVD-ISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEE------AADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLD 778
            M+ACRRTSTLA      +C G       R+ A++   + +   R  SSLPDH+VVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVT DDADSVAAFKDF+AEAV+ E      AA+     XXXXXXX   XXXXXX   XXXXXXXXXXXXXXXXXX VE+   PVS  E    LVFKRDWGSGV GS LAHR+SAEQKKYV+RFGSTLQQPLD
Sbjct:    1 MMACRRTSTLAASVLATQCRGT------RQVASRRSAELVVNTRSLSSLPDHIVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAPAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPVSSQE----LVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLD 246          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 3.450e-67
Identity = 160/200 (80.00%), Postives = 162/200 (81.00%), Query Frame = 2
Query:  203 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAV--EEEAA------DTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLD 778
            ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVT DDADSVAAFKDF+AEAV  E EAA        XXXXXXXXXXXXXXXX         XXXXXXXXXXXX     VE    PVS PE    LVFKRDWGSGV GS LAHR+SAEQKKYVERFGSTLQQPLD
Sbjct:   25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVERPPAPVSSPE----LVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLD 220          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.920e-37
Identity = 104/215 (48.37%), Postives = 128/215 (59.53%), Query Frame = 2
Query:  158 RWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEE----------AADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGL-VFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQ 769
            R  ++LP H +VGMPALSPTM HGN+  W K  GDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV  G Q I VG PI +T +D DSVAAF+ ++A A +E           AA T      XXX                 XXXXXXXXXX       E A+     P++ +G      +WG  VS SPL +RLS EQK Y  RFG+TLQ+
Sbjct:   32 RAMATLPSHTLVGMPALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXXVAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKA---TEAAKSAQKAPDAPAGAPTASVNWGQRVSRSPLYYRLSQEQKLYSSRFGATLQE 243          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.990e-35
Identity = 119/207 (57.49%), Postives = 143/207 (69.08%), Query Frame = 2
Query:  158 RWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPE-STSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPL 775
            R FS+LP H VVG+PALSPTM  G I  W K  GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVEAG + +PVG PI V  D+ D VAAF DF  EA         XXXXXXXXX           XXXXXXXXXXXXXXXXXXXXX       V+ P+ +T+   FKR WG+ VS SPLA +++ +Q +Y+ ++GSTLQ P+
Sbjct:   36 RAFSALPPHEVVGLPALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAX--------XXXXXXXXXTAAPVVTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADVAPPQVTTTTYAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A0P1AE60_PLAHL (Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE60_PLAHL)

HSP 1 Score: 135 bits (339), Expect = 3.790e-33
Identity = 77/209 (36.84%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  155 ARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLDL 781
            +R FSS P H +VG+P+LSPTM  GN+  W  +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+  GT++IPVG P+ V  +D +SVAAFKDFK +      A                                            +  A+   S P S +  VF+  WG G+  S ++  L  +Q+ Y+ ++G T   P+ L
Sbjct:   23 SRGFSSYPPHDIVGLPSLSPTMETGNMSKWNTKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVVEDQESVAAFKDFKLDEASVAPATPVSSKKPSNKSRSEPAMPQPSQKASPPMEVSPPTKTIEHTSTVLTNAKA--SSPVSATTTVFEEKWGFGIKKSAISTSLLKKQQLYIAQYGVTGMTPVAL 229          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A8K1FAL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAL3_PYTOL)

HSP 1 Score: 133 bits (334), Expect = 1.540e-32
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 2
Query:  119 RSANKPGVDISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVE 466
            RSA+         R F+S P H VVG+PALSPTM  GN+ SW  +EGD+I+AGD++C++ETDKA VDF+AQDD F+AK LV  GT++I VG PI VT ++ D VAAFKDFK EA E
Sbjct:    8 RSASSARRSALLLRGFASYPAHEVVGLPALSPTMEQGNLASWRLKEGDKISAGDIICQIETDKAVVDFEAQDDMFLAKILVPEGTENISVGQPIMVTCEEEDDVAAFKDFKVEASE 123          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A7R9WUM2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUM2_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.970e-32
Identity = 116/261 (44.44%), Postives = 152/261 (58.24%), Query Frame = 2
Query:    2 HPPPSSQYNNMLACRR-TSTLAVRACVRRCHGDVFFGGGRRSANKPGVDISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVS-GSPLAHRLSAEQKKYVERFGSTLQQPLD 778
            H   S   N MLA  R  ++ ++R+ V R        G R         +S+A    +LP H+VVGMPALSPTM  G +  W  +EG E  AGD + ++ETDKA++DF+AQDD ++AK L +AG +D+PVGTPI VT ++ + VAAFKDF A A E EAA   XXXXXXXXXXXXXXXXXXXX      X      XX      +E A  PV              WG      SP+A  L+ +Q++Y+E++G+T Q+PLD
Sbjct:   45 HHSQSDHDNTMLAISRLAASSSLRSGVTRISNRAAAIGCRS------FHVSSALQDDNLPYHIVVGMPALSPTMDQGTLAEWYLEEGSEFIAGDALAKIETDKASIDFEAQDDGYIAKILKDAGAEDVPVGTPILVTVEEEEDVAAFKDFVAPAAEPEAAAAPXXXXXXXXXXXXXXXXXXXXVVAAAAXPVVDAVXXPSAADMLE-AVAPV----------LSTGWGRLAQINSPIAKSLAKKQQEYIEKYGTTGQKPLD 288          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A425C5Z6_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C5Z6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.990e-32
Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 2
Query:  146 ISTARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAA 478
            + +AR FSSLPDH VVG+PALSPTM  G I  W KQEGD I+AGDVVCEVETDKA VDF+A DDS++AK LV++G+ ++ VG PIFVT  + + +AAFKDF A+A  +E A
Sbjct:   36 VLSARTFSSLPDHEVVGLPALSPTMEVGTIAKWNKQEGDPISAGDVVCEVETDKAVVDFEATDDSYLAKILVQSGSGEVAVGKPIFVTVMEEEDIAAFKDFSADATPDENA 146          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: F0WT72_9STRA (Dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WT72_9STRA)

HSP 1 Score: 132 bits (331), Expect = 6.290e-32
Identity = 82/214 (38.32%), Postives = 109/214 (50.93%), Query Frame = 2
Query:  170 SLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVE-----------EEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFK-RDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPL 775
            S P H VVG+PALSPTM HGN+  W  +EGD I +GDV+CEVETDKA VDF+AQDD F+AK LV  GT+ I VG PI VT ++ + VA F DFK E  E           E ++D                                           V+E + P  +  + S       +WG GV  SPLA  L+ +Q++Y+E++G T + P+
Sbjct:   22 SYPPHEVVGLPALSPTMDHGNLAKWRLKEGDRINSGDVICEVETDKAVVDFEAQDDMFLAKILVPEGTEQISVGQPIMVTCEEEEDVAKFADFKVEEKEVAAENVDVPQKESSSDDAQYSLPSSPQKIPENVQPQSTQNADEMHLESQKAETSPPRTPVQETKQPPKEGFTQSPFPQSIENWGLGVKKSPLAFSLAKKQQEYLEKYGFTGRFPI 235          
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Match: A0A0W8DVI9_PHYNI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVI9_PHYNI)

HSP 1 Score: 131 bits (329), Expect = 6.420e-32
Identity = 78/209 (37.32%), Postives = 107/209 (51.20%), Query Frame = 2
Query:  155 ARWFSSLPDHLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEARVPVSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLDL 781
            +R FSS PDH V+G+P+LSPTM  GN+  W  +EGD I+AGD+VCE+ETDKA VD++A DD ++AK L+  G ++IPVG P+ V  D+ +SVAAFKDFK E      A                                            V +  +  S P  TS  VF+  WG G+  S ++  L  +Q+ Y+  +G T   P  L
Sbjct:   23 SRSFSSYPDHEVIGLPSLSPTMETGNMSKWNMKEGDAISAGDIVCEIETDKAVVDYEATDDMYLAKILIPEGAENIPVGQPMMVVVDEEESVAAFKDFKLEDAPSAPA------------------APALSAEEKPPKKEDVPVDAKTHEPVVPQDFLAASAP--TSSAVFEEKWGLGIKKSAISTSLIKKQQAYIALYGITGMTPAAL 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR44_9PHAE2.490e-8472.66Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D8LTQ3_ECTSI3.450e-6780.00Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
A0A836CM78_9STRA4.920e-3748.37Putative dihydrolipoyllysineresidue acetyltransfer... [more]
A0A7S2DWD0_9STRA1.990e-3557.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0P1AE60_PLAHL3.790e-3336.84Pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
A0A8K1FAL3_PYTOL1.540e-3258.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9WUM2_9STRA2.970e-3244.44Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A425C5Z6_9STRA3.990e-3263.06Acetyltransferase component of pyruvate dehydrogen... [more]
F0WT72_9STRA6.290e-3238.32Dihydrolipoyllysineresidue acetyltransferase compo... [more]
A0A0W8DVI9_PHYNI6.420e-3237.32Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:36109..40045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTQ3
PFAMs2-oxoacid_dh,Biotin_lipoyl,E3_binding
Model size1435
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC02742,RC02857
KEGG koko:K00627,ko:K13997
KEGG ReactionR00209,R02569
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
Exons4
Evalue5e-71
EggNOG OGsCOG0508@1|root,KOG0557@2759|Eukaryota
EC2.3.1.12
Descriptiondihydrolipoyllysine-residue acetyltransferase activity
Cds size753
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.7.1prot_P-littoralis_Contig69.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig69 36760..40014 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791428.8973591-UTR-P-littoralis_Contig69:36108..367591680791428.8973591-UTR-P-littoralis_Contig69:36108..36759Pylaiella littoralis U1_48UTRP-littoralis_Contig69 36109..36759 -
1680791428.967301-UTR-P-littoralis_Contig69:40014..400451680791428.967301-UTR-P-littoralis_Contig69:40014..40045Pylaiella littoralis U1_48UTRP-littoralis_Contig69 40015..40045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791428.9129286-CDS-P-littoralis_Contig69:36759..368291680791428.9129286-CDS-P-littoralis_Contig69:36759..36829Pylaiella littoralis U1_48CDSP-littoralis_Contig69 36760..36829 -
1680791428.927845-CDS-P-littoralis_Contig69:37416..378201680791428.927845-CDS-P-littoralis_Contig69:37416..37820Pylaiella littoralis U1_48CDSP-littoralis_Contig69 37417..37820 -
1680791428.9422078-CDS-P-littoralis_Contig69:38130..382371680791428.9422078-CDS-P-littoralis_Contig69:38130..38237Pylaiella littoralis U1_48CDSP-littoralis_Contig69 38131..38237 -
1680791428.955637-CDS-P-littoralis_Contig69:39842..400141680791428.955637-CDS-P-littoralis_Contig69:39842..40014Pylaiella littoralis U1_48CDSP-littoralis_Contig69 39843..40014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig69.7.1

>prot_P-littoralis_Contig69.7.1 ID=prot_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=251bp
MLACRRTSTLAVRACVRRCHGDVFFGGGRRSANKPGVDISTARWFSSLPD
HLVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQ
DDSFMAKHLVEAGTQDIPVGTPIFVTADDADSVAAFKDFKAEAVEEEAAD
TAADTATPPEPVAEEKVAAAAPPAPAPAPAAAPPAAPAPAAAPVEEARVP
VSKPESTSGLVFKRDWGSGVSGSPLAHRLSAEQKKYVERFGSTLQQPLDL
*
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mRNA from alignment at P-littoralis_Contig69:36109..40045-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig69.7.1 ID=mRNA_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3937bp|location=Sequence derived from alignment at P-littoralis_Contig69:36109..40045- (Pylaiella littoralis U1_48)
CCATCCTCCACCCAGCAGCCAGTACAATAATATGCTTGCCTGCCGAAGGA CATCGACTTTGGCTGTGAGGGCCTGTGTGAGGCGATGCCATGGAGATGTA TTTTTCGGGGGAGGTAGACGGAGTGCCAATAAACCAGGCGTCGATATCAG CACCGCGAGATGGTTTTCTTCGTTGCCAGATCACTTGGTCGTCGGAATGC CAGGTGAGAGTTACTGCTGTATCCCGTTCATCTCTTCACTGCTGTACTCC TGCTGCACCATGTACGGAGGTTGGGCTGTTTCGAATTGTGGAACGGGGTG GCACATGGGATATCGTTCTCTTTTAGGCATGAACAATAGATTTCGCAGTC GGTCGTTCCTCGGTGTCTCCGTCCTCCGCTTGACGGACCAGAGAGGTTGA GAGTGTGTCACTGCTGTACATGTTTACCGGTACTTTGTGAGCGCTACTGC TGTTACCGCAGCAGTAGTCAAACCTCCCTTTTTCGGAAGTTCCAATCGTC AACAACCGCTTGCCACGCTGCACAGCAGTAGTACATGTAGTGCACAAGAC CACTCGAACGAGTTTAGCTTCATGAGAAACGCTGGCGATCAAGACAAACA AGCGTACGTAGGAGCCTCTTCCTAATTCTCTGTGTCCGGACCTGCAAGTC TGACGACGAGGAAGGAGACTTCTGTGTCCATGATAACGGCGTTCCATATG GTACATACATACAGCAGTAACAAAGCTGGATCATCTTGTGTCGTTTCAGC ACTGGTGTAGTGGTATCATACATACAACCGTTCGTATCATACAGCAGAGA GAACGCGCTAGCAGGCACGAAACGAGTCTTCCAGTTCGAACTTCCGGGTG TAAACTAGCAAGCGAGTTCAATTGTGCTCAGAGGTCGCGGGGATTATTAT GTAGTTGCGGGTTGTTTGTTAGAATAGAGAACAAGAAATCGACGCCGGTA TCTTCCGCGTAAGAGGTTGAGCTTCAAGTCATATGATAGCATCGTATTGT ATGAATCAAGTCACACGGACAGCAGTTTTCGTGGTCTATAACTGCTCGCA AGGGTCGGGAGCGGACTACGAAATGCGTGCCCAAGTACGATATATATATA TATATATATACGGTTTCAGTGTGCAATTTGAACAAAGCCATCGCAACCGT CCGGAGCATACTGCTGTAGCTTCCCTTAGATCCGCACAGCACAGCGCAGG GCTGAGCCCAGCGGTAGATGCCTGGGGTCCGCCCGAGTCAAACGAGGGAG AGCAGTTGGGAGAGGGTTCTCGGGCAGGCGTGCGGATACCGACAAGGCCG TAGTGACTAGATTGTGCAGAGCTACGCCACCCCGCCGCGTACGTCGCATG AAACTTCAAAGCTTGACGGGTGGTACCGACTAAGTAGTGGGCAGTGTGAG CTATAGGTTGCTCAGCTTGCTTGATGCTGGACGGCTCCAATAGAGCTGCT GTGGCCGCGTCACACGTGCACAGATGGGCTCAAGAACGAATTCATGTTCA CAACAGCGCTGCTGTCCTGTTTGGTGCACACCCCTTGGTTCGGGAGGGAA TTCGAACATCCAAGACGTAGCGCCTTTTCCAAGGATGCTGCGGTTTTCGT TGTTGCCGCCGCTGCTGTTATATTTACAGCTGCTGTCTGCTGTAAGTTTT TCTTGCGAACGGGCTCTCTCGTCCCGACGAAATGCCTTCCTGCTTGCCTG TTGGCTGAGACAGCGTGTAAGTCCTTCGCCCAGCTGACCTGCCGCCTGCT TTCACGGACTGCTCCGTTACCTGCCCGGCCTCGACGTTTGACGCGACAAC GTTCGCAGCGCTTTCGCCGACGATGACGCACGGGAACATCGGCTCCTGGG GCAAGCAGGAAGGCGACGAGATTGCAGCGGGAGATGTTGTTTGCGAGGTG GAAACTGACAAAGCGGTGAGATTCATTTGAAATCGGTCGATTGGAACCGG GGCTTGGTTTGAGTAAGGTTCTCCCACACGAAAGGAAAACAATTGGTCGG AACCGCTGCTCGATTTGAGTAGCGTCGGCTCACACGAAAGCAGTACGTGT AGTTTTTCTTCAAAAAATCAGTCCCACCGTGTATCCACCCACACTCCATA GCCATGATTCAATTGTCCGAATTTTCTTCTCAAGTGCGGCTTGGTCGCGA AAGTTTCCAGTGACCAAACGATGCACCCCTCGCCTTTTCTTCCGCTTGCT CGCCCCCGGTTGTGCTCTCGCTCAGACGGTAGATTTCGATGCGCAAGACG ACTCATTCATGGCGAAGCACCTCGTCGAGGCAGGGACCCAAGACATCCCC GTCGGGACCCCTATCTTCGTTACCGCAGATGATGCCGACTCCGTCGCGGC GTTTAAGGATTTCAAAGCGGAGGCGGTTGAGGAAGAAGCAGCCGACACCG CCGCCGACACCGCAACTCCGCCAGAGCCCGTCGCTGAGGAAAAGGTAGCG GCGGCTGCGCCGCCGGCACCGGCTCCGGCCCCTGCAGCTGCACCGCCCGC AGCGCCGGCACCTGCTGCCGCACCTGTCGAAGAAGCCCGTGTGCCGGTGT CCAAGCCAGAGTCAACGTCGGGGCTTGTTTTCAAAAGGGACTGGGGAAGC GGGGTTAGCGGTAGCCCGTTGGCTCACAGGTATGAAGAGGGGTGCTTTTT GTTTGTTTTTGCCTTTTTGACGCCATTTCAGGGTTACGCCAACATACGCG ACAGAGGTTGAACTGGAAGTTTTCTTTGGTGTAAACATTCTGAGCAATCA TGATGAAGCGTTGACGGTGCATGAGTTTAGTCCGAGACGGGGGTATCTGC CGGGGGCAAGAGCGGCAATACCAGCTGGCAACGTGTTGATGCATTGTATC TTACATGCGATGTGCTCCCATGCTAATGCTCGCAGTGGGGCTGGTACTCT CAACCAGAGTTGGTGGGACAGACTACCTAGACCTGCTTTGTAGGCGAACA ACAAGAAAAGGGTGGACGACGGCCTCTCCCACGTTGTTGTTACTGCTACA GGAGATTTGCGCCGAGTCACCATGCGGCAGCAGTCCATCTCCTGAACGTT CGTGCGCACGTTCCGACTTTTTGGCGAGGGTTGTGCGTATGCATGCTGTA GTTCCCTGCTCCCCTGCTGTTTTTGCCGATCGATTCCGCCCTTCCCGCTG CTCGGCTGCTGCTTTCGCATTTTCGCACTCTGGCGTGCCCACCCACCCTC CCACGCTGCGGCTCAGGTTGTCAGCGGAGCAAAAGAAGTACGTCGAGCGT TTTGGGTCCACCCTCCAGCAGCCTTTGGATCTCTGAAGAATCACTCCTTT TGAATGCGAAGCCCCAGCTGTCTTGGGATCGGGGGAGCGTCGCCCTCCAT AGTTTTGTCTGTTCCGTGGTGGAGAAATAGCGCGTCGGGTGACGCGAGCC CACTCTCAAGCAGCCTTACACAAGATGTTTGAAGCACCGATTTTAAGCAT CCAACTTGTTTCTCTTCTTGTATACAATGTCTGCAAGTGTCGTGGACACG GTTCACGACAGCAGTATCATATGACGTCGGATATGTCGAAAAGCATTTGG TCGACATGGACGCCCCCATGGGGCCCAACGGTGAAAAGCCTCCCGAGTTT CACGGCTCTGTTCGATGCATCGGCATACTCTTCCAATGATTTAGTGTAAA ATTGGGCATTCGACGTGAGCGTTGGAAGCGCGGGGGGGTTATGGCGGGAA AGGTCGATGGCCAACCACATACCGCTCATGCCCTCATTTCGTATCATAGC TATCCGTTGGGAGGATTACCTACGGAATATGTCTGTTCACAGCACGCCTT TTTGTGTGGAATGCAGCGTTGGAGATCGGCGCTAACATTGTTGCCGATCA GAATTTTTGAATTTTCGAGATCTGGGAAAAGAAAATGGATTTCGATTTTA AAGCGTGGTCGATCTTTACTCGATCTCGATCTCGAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig69:36109..40045-

>mRNA_P-littoralis_Contig69.7.1 ID=mRNA_P-littoralis_Contig69.7.1|Name=mRNA_P-littoralis_Contig69.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=753bp|location=Sequence derived from alignment at P-littoralis_Contig69:36109..40045- (Pylaiella littoralis U1_48)
ATGCTTGCCTGCCGAAGGACATCGACTTTGGCTGTGAGGGCCTGTGTGAG
GCGATGCCATGGAGATGTATTTTTCGGGGGAGGTAGACGGAGTGCCAATA
AACCAGGCGTCGATATCAGCACCGCGAGATGGTTTTCTTCGTTGCCAGAT
CACTTGGTCGTCGGAATGCCAGCGCTTTCGCCGACGATGACGCACGGGAA
CATCGGCTCCTGGGGCAAGCAGGAAGGCGACGAGATTGCAGCGGGAGATG
TTGTTTGCGAGGTGGAAACTGACAAAGCGACGGTAGATTTCGATGCGCAA
GACGACTCATTCATGGCGAAGCACCTCGTCGAGGCAGGGACCCAAGACAT
CCCCGTCGGGACCCCTATCTTCGTTACCGCAGATGATGCCGACTCCGTCG
CGGCGTTTAAGGATTTCAAAGCGGAGGCGGTTGAGGAAGAAGCAGCCGAC
ACCGCCGCCGACACCGCAACTCCGCCAGAGCCCGTCGCTGAGGAAAAGGT
AGCGGCGGCTGCGCCGCCGGCACCGGCTCCGGCCCCTGCAGCTGCACCGC
CCGCAGCGCCGGCACCTGCTGCCGCACCTGTCGAAGAAGCCCGTGTGCCG
GTGTCCAAGCCAGAGTCAACGTCGGGGCTTGTTTTCAAAAGGGACTGGGG
AAGCGGGGTTAGCGGTAGCCCGTTGGCTCACAGGTTGTCAGCGGAGCAAA
AGAAGTACGTCGAGCGTTTTGGGTCCACCCTCCAGCAGCCTTTGGATCTC
TGA
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