mRNA_P-littoralis_Contig1170.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A7C7IX81_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7C7IX81_9FLAO) HSP 1 Score: 258 bits (660), Expect = 3.870e-83 Identity = 123/131 (93.89%), Postives = 127/131 (96.95%), Query Frame = 1
Query: 1 LVAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTSDDEISLATTEGAFF 393
LVAAPVVNPNGGNLA+GTTIYNTALT NGANDVSPGIYSWDGTKWITQHLREDYRRY QTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFS GAI+DFTS DEISLAT+EG+FF
Sbjct: 56 LVAAPVVNPNGGNLAIGTTIYNTALTANGANDVSPGIYSWDGTKWITQHLREDYRRYAQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSAGAIEDFTSQDEISLATSEGSFF 186
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A6G6GP17_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GP17_9FLAO) HSP 1 Score: 229 bits (583), Expect = 1.740e-71 Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 1
Query: 1 LVAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTSDDEISLATTEGAFF 393
LVAAPVVNP GG LAVGTT+YNT LTTNGANDVSPGIYSWDGTKWITQHLREDY+RY QT CQRTTIRE+T NPNPNDVDVV GL ++VF PKYSGRYRIEVG NFS G I DFTS DEISLAT+EG+FF
Sbjct: 56 LVAAPVVNPAGGTLAVGTTVYNTELTTNGANDVSPGIYSWDGTKWITQHLREDYKRYTQTNVCQRTTIRESTSNPNPNDVDVVAGLDNEVFRPKYSGRYRIEVGVNFSAGEIADFTSQDEISLATSEGSFF 186
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A7Y2EJR5_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y2EJR5_9FLAO) HSP 1 Score: 187 bits (476), Expect = 2.240e-55 Identity = 85/130 (65.38%), Postives = 106/130 (81.54%), Query Frame = 1
Query: 10 APVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTS--DDEISLATTEGAFF 393
+PV+NPNGG L +GTT+YNTA TT+GANDV PGIYSWDGT+W+TQ+ +++Y+++ QTGGCQRTTIRE+ NPNP+D D V GL++Q FTP +SG YR+EV TN G I DFTS + EISLAT EGAFF
Sbjct: 55 SPVINPNGGALEIGTTVYNTATTTSGANDVHPGIYSWDGTRWLTQYYKKEYQKFEQTGGCQRTTIRESNSNPNPSDADNVAGLTNQTFTPTFSGTYRVEVRTNLGAGRIQDFTSGTESEISLATMEGAFF 184
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A3L9YAC0_9FLAO (Uncharacterized protein n=2 Tax=Ulvibacter antarcticus TaxID=442714 RepID=A0A3L9YAC0_9FLAO) HSP 1 Score: 182 bits (462), Expect = 2.920e-53 Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1
Query: 4 VAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTSDDEISLATTEGAFF 393
V+APV NPNGG++ GT ++NT LTTNGANDVSPG+Y+W G W+ Q D ++Y QT GCQRTTIRE+ GNP P D D V GL+SQ FTPKYSG YRIEV TNF+ G ID FTS D+ISLAT+EG+FF
Sbjct: 57 VSAPVTNPNGGSIVSGTVVFNTNLTTNGANDVSPGVYAWSGAIWLPQFTLTDRKKYEQTSGCQRTTIRESHGNPEPTDSDDVAGLNSQTFTPKYSGIYRIEVKTNFAAGEIDPFTSSDKISLATSEGSFF 186
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A2D8FVC2_9FLAO (Uncharacterized protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2D8FVC2_9FLAO) HSP 1 Score: 176 bits (446), Expect = 9.180e-51 Identity = 82/133 (61.65%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 1 LVAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTS--DDEISLATTEGAFF 393
++A+PV+NPNGG L GTTIYNT+ TTNGANDVSPGIYSW G+ W Q +++Y ++ QTGGCQRTTIRE+ G PNP+ D + GL+++ F P YSG Y++EV TNF G I+DFTS + EISLAT+EGAFF
Sbjct: 61 ILASPVINPNGGALEPGTTIYNTSNTTNGANDVSPGIYSWTGSSWEPQFFKKEYEKFEQTGGCQRTTIRESFGTPNPSAADNIAGLTARTFVPTYSGVYKVEVRTNFGAGKIEDFTSGTESEISLATSEGAFF 193
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A1A9LBU4_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita soesokkakensis TaxID=1385699 RepID=A0A1A9LBU4_9FLAO) HSP 1 Score: 173 bits (439), Expect = 9.220e-50 Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 1
Query: 13 PVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFT-SDDEISLATTEGAFF 393
PV NP GGNL GT +YNT+LTTNG+ND+ PG+Y+WDG+ W Q + E+Y++Y QTGGCQRTTIRE+ G+P P+ D V GL++Q FTPKYSG Y+IEV TNF G + +FT S D+ISLAT+EGAFF
Sbjct: 62 PVANPVGGNLVAGTVVYNTSLTTNGSNDLYPGLYAWDGSSWKPQFIMEEYKKYSQTGGCQRTTIRESYGDPRPDHADNVAGLTNQTFTPKYSGTYKIEVRTNFGAGEMTNFTGSYDKISLATSEGAFF 189
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A5C6YSP6_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita lipolytica TaxID=153267 RepID=A0A5C6YSP6_9FLAO) HSP 1 Score: 166 bits (419), Expect = 9.110e-47 Identity = 79/127 (62.20%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 13 PVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTSDDEISLATTEGAFF 393
PV+NPNG NL GT +YNT+ T GANDV PGIY+W G++W Q + E+Y++Y QTG Q TTIR+ P P+D D V GL++QVF PKYSG YRIEV TNFS G I+DFTS D+ISLAT EGAFF
Sbjct: 62 PVINPNGSNLVEGTVVYNTSKTKLGANDVYPGIYAWSGSEWNPQFIMEEYKKYTQTGSYQLTTIRDGYRTPRPDDADNVAGLTNQVFKPKYSGTYRIEVKTNFSAGKINDFTSLDKISLATMEGAFF 188
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: UPI001890E9CC (hypothetical protein n=1 Tax=Nonlabens antarcticus TaxID=392714 RepID=UPI001890E9CC) HSP 1 Score: 161 bits (408), Expect = 4.820e-45 Identity = 77/130 (59.23%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 4 VAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLREDYRRYVQTGGCQRTTIRETTGNPNPNDVDVVTGLSSQVFTPKYSGRYRIEVGTNFSGGAIDDFTSDDEISLATTEGAFF 393
+ +PV NPN G L GT +YNT+ T +G+NDV PGIY+WDG +W Q E+Y ++ QTGG QRTTIRE +PNPN+ D + GLS F PKYSG Y+IEV TNFSGG + DF++ DEISLAT EGAFF
Sbjct: 59 IESPVKNPNTGPLVQGTIVYNTSKTKSGSNDVYPGIYAWDGFQWQPQFYMEEYEKFTQTGGDQRTTIRENLFDPNPNNADPIDGLSGVGFIPKYSGFYKIEVKTNFSGGKVADFSNIDEISLATAEGAFF 188
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A7K0EYH3_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita lutea TaxID=2610884 RepID=A0A7K0EYH3_9FLAO) HSP 1 Score: 157 bits (396), Expect = 2.490e-43 Identity = 69/108 (63.89%), Postives = 91/108 (84.26%), Query Frame = 3
Query: 384 SFLFALNGTGVNMDPTSTTFDYEQGWIYTHSYSTHNSIESPALEDNTVPHFATVVYYRYLLAGHNYTFTLSNNINTGNDYFVNNGDSGTGQGHIGHDQPCSVEFTYLG 707
+F F ++G+GVN++P S TFDY++GW+YTHSYS N+IESP++E + VPHF VV+Y +LLAG NYTF+L+N TG+ +FVNNGD+G GQGHIGHDQPCSVEFT++G
Sbjct: 187 AFFFKISGSGVNINPASGTFDYKRGWMYTHSYSALNTIESPSIESHLVPHFEGVVHYLHLLAGENYTFSLTNCTITGDQFFVNNGDTGDGQGHIGHDQPCSVEFTFIG 294
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Match: A0A2N0ETF5_9FLAO (Uncharacterized protein n=1 Tax=Ulvibacter sp. MAR_2010_11 TaxID=1250229 RepID=A0A2N0ETF5_9FLAO) HSP 1 Score: 152 bits (385), Expect = 1.090e-41 Identity = 67/107 (62.62%), Postives = 88/107 (82.24%), Query Frame = 3
Query: 384 SFLFALNGTGVNMDPTSTTFDYEQGWIYTHSYSTHNSIESPALEDNTVPHFATVVYYRYLLAGHNYTFTLSNNINTGNDYFVNNGDSGTGQGHIGHDQPCSVEFTYL 704
SF F ++GTGV+++P S+++DY +GW+YTHSYSTHNS +SPAL+DNT H A++VYY YL+ G Y F LS I TG+ YF+NNGD+G G+GH+GHD+PCSVEFTYL
Sbjct: 186 SFFFTMSGTGVDINPASSSYDYMEGWLYTHSYSTHNSNDSPALQDNTYLHNASLVYYLYLVGGTAYNFNLSICITTGHSYFLNNGDTGEGRGHVGHDRPCSVEFTYL 292 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1170.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1170.7.1 >prot_P-littoralis_Contig1170.7.1 ID=prot_P-littoralis_Contig1170.7.1|Name=mRNA_P-littoralis_Contig1170.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp LVAAPVVNPNGGNLAVGTTIYNTALTTNGANDVSPGIYSWDGTKWITQHLback to top mRNA from alignment at P-littoralis_Contig1170:59425..60131+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1170.7.1 ID=mRNA_P-littoralis_Contig1170.7.1|Name=mRNA_P-littoralis_Contig1170.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=707bp|location=Sequence derived from alignment at P-littoralis_Contig1170:59425..60131+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1170:59425..60131+ >mRNA_P-littoralis_Contig1170.7.1 ID=mRNA_P-littoralis_Contig1170.7.1|Name=mRNA_P-littoralis_Contig1170.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=417bp|location=Sequence derived from alignment at P-littoralis_Contig1170:59425..60131+ (Pylaiella littoralis U1_48)back to top |