prot_P-littoralis_Contig680.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig680.11.1
Unique Nameprot_P-littoralis_Contig680.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length204
Homology
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BLAST of mRNA_P-littoralis_Contig680.11.1 vs. uniprot
Match: A0A6H5K2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U9_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 3.880e-37
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 0 
Query:    9 NATIRVDHVSKRASLVDVAKMVLDCGEDHAQAALNKLLGPTADADEDCPRLQINNRGGFTQVANVDFLIEIIWLLPGAIPDDVRREMCHAVCRLCEEDVSLVTDTEARHIVMREASLRAHAQGGKKD---NIPAGFELL 144
            +A IRVD  S + S+ DVAK+VL C ++ A+ A+ KLLG T+D D D  R+QINNRG  T VA V+ L+EI+WLLPG I DDVRR++ H VC+    D  LV ++E RHI MREASL A+A     D   +IP G+  L
Sbjct:    2 DAVIRVDRASNKGSVTDVAKLVLKCDDEEAEKAVRKLLGATSDTDRDFLRVQINNRGRLTLVAGVNMLVEIVWLLPGVIADDVRRDISHKVCKALGGDTRLVEESETRHIAMREASLHANASKVATDQSRDIPPGYSFL 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig680.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2U9_9PHAE3.880e-3751.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig680contigP-littoralis_Contig680:21019..21693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig680.11.1mRNA_P-littoralis_Contig680.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig680 21019..21693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig680.11.1 ID=prot_P-littoralis_Contig680.11.1|Name=mRNA_P-littoralis_Contig680.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=204bp
MATATSLDNATIRVDHVSKRASLVDVAKMVLDCGEDHAQAALNKLLGPTA
DADEDCPRLQINNRGGFTQVANVDFLIEIIWLLPGAIPDDVRREMCHAVC
RLCEEDVSLVTDTEARHIVMREASLRAHAQGGKKDNIPAGFELLGDLRRK
ALELEERKISLKRKRCDIVIHMYRSLEELDITLDTRAQVHMLDTLAQNHK
TRR*
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