mRNA_P-littoralis_Contig678.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 312 bits (799), Expect = 1.780e-96 Identity = 185/454 (40.75%), Postives = 258/454 (56.83%), Query Frame = 1
Query: 64 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
DG PVG GA KV + +K I +W EA+L S SK + +H+G + T + E ++ A + VM KLL P GGMP++ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL +L + A E +F + NMDQ P+Q EMP +TT++KTGAK A I+TGG EK R+T+VLAV DG+KV PRII++G PF+ T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+++ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+++C K+CGLTL LDGSED
Sbjct: 113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 305 bits (782), Expect = 7.460e-95 Identity = 193/473 (40.80%), Postives = 257/473 (54.33%), Query Frame = 1
Query: 7 AYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
+Y KL+ + F+R+ C DG PVG GA KV +D++ I W +EA + K K SK +S+H G T EVE + D IN R+ VM KLL P GG+ + E+ F+ +F WY+RF +RH SIRR+TSVGQK P G+EG A+A + KLR++L E A E +F L NMDQTP+Q EMP +TT+EK GAK A I+TGG+ EK R+T+ LAV DG KV RII+KG PF+ NFGYP G+S GVQ+ SW D + W+++ + RP GS + QR S+LVLDDFR + T ++++ GGLTP+ QPLDR ++KE KR +R RYT ++ ++G K+ P RGLV+TW KE W I+ T++ CFKVCGLTL LDGSED
Sbjct: 74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 305 bits (780), Expect = 7.560e-94 Identity = 196/481 (40.75%), Postives = 262/481 (54.47%), Query Frame = 1
Query: 25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSE 1245
KL ++R C DG PVG GA V + K I +W QE +L S SK + +H+G +A T + E A+VD +N RK VM KLL P GGM ++ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+EKTGAK A I+TGGE EK R+T+VLAV DG+KV PRII+KG PF+ GG N P G + + SW D + + W+ + RP + S QRP +LVLDDF+CH++E F L AKT+ + + GGLT + QPLDR +NK+ KR +R +YT S + D RSG K+ P G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE
Sbjct: 88 KLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKTV-IFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 301 bits (772), Expect = 3.460e-93 Identity = 186/458 (40.61%), Postives = 257/458 (56.11%), Query Frame = 1
Query: 76 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
VG +G+ + + +K I +W QE +L S SK + +H+G +A T + E A+VD IN RK VM KLL P GGMP++ +PE+ F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV DG+ V P II+KG PF+ T + G+PA G+S GVQ+ SW + + W+ + M RP + S QRP +LVLDDF+CH++E F L A T+++ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W+ ++ T+ +CFK+CGLTL LDGSED
Sbjct: 77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 303 bits (775), Expect = 1.910e-89 Identity = 185/462 (40.04%), Postives = 251/462 (54.33%), Query Frame = 1
Query: 25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTL 1227
KL+V+ F+R+ C DG P G GA KV + ++ I +W E L A S SK + +H +A ++E A+V+ IN RK+ M KLL P GG+ + +PE+ +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+E TGAK A I TGG+ EK R+T+ LAV DG+KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+++ + GGL P+ QPLDR +NK+ KR +R YT+ RD ++G K+ P RG VATW K W +I+ +++CFK+CGLTL
Sbjct: 61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.420e-87 Identity = 163/372 (43.82%), Postives = 222/372 (59.68%), Query Frame = 1
Query: 304 MAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
M KLL P GGMP++ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E +F L NMDQTP+Q E+P +TT+EKTGAK A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+++ + G LTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++ + T+++CF +CGLTL LDGSED
Sbjct: 1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 281 bits (720), Expect = 6.830e-86 Identity = 182/460 (39.57%), Postives = 242/460 (52.61%), Query Frame = 1
Query: 124 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
+RD ES A + A K SK + +H G +A T ++E A+V+ IN RK+ VM KLL P GG+ + +PE+ F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+EKTGAK A I TG EK R+T+ LAV DG KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+++ + GGLTP+ QPLDR +NK+ KR +R YT+ RD ++G K+ P RG VATW K W +I+ T+++CFK+CGLTL LDGSED
Sbjct: 31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 268 bits (686), Expect = 1.230e-82 Identity = 162/401 (40.40%), Postives = 220/401 (54.86%), Query Frame = 1
Query: 304 MAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRS-----------------------------CFKVCGLTLNLDGSED 1248
M KLL P GGM ++ +P + F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L A E +F L NMDQTP+Q EMP +TT+EKTGAK A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF+ +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+++++ GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+ S CFK+CGLTL LDGSED
Sbjct: 1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 268 bits (686), Expect = 4.570e-77 Identity = 189/517 (36.56%), Postives = 245/517 (47.39%), Query Frame = 1
Query: 25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARY----------------------------------------------------TSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
KL +F+R+ C DG PVG GA KV G+D++ + W +EA + K K SK +S+H G T EVE + D IN E S G ++ F+ +F WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR++L E A E +F L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T LAV DG KV RII+KG PF+ FGYP G+ VQ+ SWCD + W+++ + RP GS + QR S+LVLDDFRCHR E F K L T ++++ GGLTP+ QPLDR +NKE KR +R S I D ++G K+ P RGLV+T KE W I+ T++ CFKVCGLTL LDGSED
Sbjct: 4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCIN--------------------EQLAASAG--------EILAFRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADP--KTG-KLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.730e-76 Identity = 180/510 (35.29%), Postives = 249/510 (48.82%), Query Frame = 1
Query: 25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSHDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALLYNMDQTPIQAEMP---PDTTVEKTGAKSACITTGGETEKLRYTV------------------------VLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSW-----CDGTQS-----------------------------------------DEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLMVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1248
KL ++R C DG PVG GA K+ + K I +W QE +L S SK + + +G +A T + E A+VD IN RK V +KLL P GGMP++ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AW + KLR +L + A E +Y Q P E P D T E+ + A + T R + VLAV DG+KV PRII+KG PF+ T + G+PA G+S GVQ+ SW C+G ++ + W + RP + S QRP +LVLDDFRCH++E F L T+++ + GGLTP+ PLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+++CFK+CGLTL LDGSED
Sbjct: 41 KLNAAVYTREICPYDGQPVGNNGAAKLLQVPGKRIIEWLKQEEQLREKVSANPKLSKAKQVQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTVMKLRETLVKRAGE-----IYARRQPPAPDESPIKGEDLTSEQLVSVEAEDSRNSATWIRRQSSTRCRWRPLWRRPVRRMLASAQEERVLAVMADGKKVSPRIIFKGMPFIPPTVSGKGESILPRTNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGARASWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVVSTWCKEAWESTPETXRPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSED 544 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig678.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig678.34.1 >prot_P-littoralis_Contig678.34.1 ID=prot_P-littoralis_Contig678.34.1|Name=mRNA_P-littoralis_Contig678.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=416bp RCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAback to top mRNA from alignment at P-littoralis_Contig678:113851..115791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig678.34.1 ID=mRNA_P-littoralis_Contig678.34.1|Name=mRNA_P-littoralis_Contig678.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1941bp|location=Sequence derived from alignment at P-littoralis_Contig678:113851..115791- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig678:113851..115791- >mRNA_P-littoralis_Contig678.34.1 ID=mRNA_P-littoralis_Contig678.34.1|Name=mRNA_P-littoralis_Contig678.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1248bp|location=Sequence derived from alignment at P-littoralis_Contig678:113851..115791- (Pylaiella littoralis U1_48)back to top |