mRNA_P-littoralis_Contig669.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: D7FVK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK4_ECTSI) HSP 1 Score: 162 bits (409), Expect = 7.760e-45 Identity = 85/112 (75.89%), Postives = 97/112 (86.61%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLEDMKKMKVPLNRSNTPDMPGVILSDNTRFSMPK 404
+KVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQM EHRE VK T+SII+D LVGEKS + R+SFE++LK G LE+ +KVPLNR+NTPDMPGVI SDN+R +MPK
Sbjct: 156 IKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYN-IKVPLNRNNTPDMPGVIFSDNSRANMPK 266
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A024GVM8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVM8_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.240e-18 Identity = 48/94 (51.06%), Postives = 68/94 (72.34%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLED-MKKMKVPLNRSN 347
+KVEATKFTEVGFHG+DVD+II+DLVE I + KK++ E R++V++ E I+D L+G S R +FEN+LK G +E+ M + VP++R N
Sbjct: 195 IKVEATKFTEVGFHGRDVDQIIRDLVENAINLVKKQKQERVRQQVQQLVERRILDALIGPNSTANSRAAFENLLKTGEMEERMITIDVPVSRGN 288
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: F0Y6N6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6N6_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 9.080e-18 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLED 311
+KVEATKFTEVGFHG+DVD+II+DLVE IT+T+KK+ E+ REE + E I+D L G + A + SF ML+ G+L+D
Sbjct: 129 IKVEATKFTEVGFHGRDVDQIIRDLVEASITLTRKKKAEQFREEARRLVEGRILDTLTGLNAAQATQSSFREMLRKGVLDD 209
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A8J2WET5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WET5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.200e-17 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLEDMKKMKVPLNRSNTPDMPGVILSDNT 386
+KVEATKFTEVGFHG+DVD+II+DLVE I +T+K++ E R E E+ I+D L G + A + SF ML+ G+L+D +++ V + S P GVI D +
Sbjct: 118 VKVEATKFTEVGFHGRDVDQIIRDLVEASIALTRKRKAEAFRAEAARAAETRILDTLTGLNAAQATQSSFREMLRKGVLDD-RQIDVDVPHSQPPQQSGVIQLDQS 222
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: B8BRY4_THAPS (Heat shock protein HslVU, ATPase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRY4_THAPS) HSP 1 Score: 87.8 bits (216), Expect = 1.350e-17 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEK---SNPALRDSFENMLKNGMLEDMK-KMKVPLN 338
+KVEATKFTEVG+HG+DVD+I++DL++V + +TKK+Q E+ R E K E I+DIL+G +N + RDSF +ML++G+LED + ++ VP N
Sbjct: 181 LKVEATKFTEVGYHGRDVDQIVRDLMDVSMALTKKRQTEKLRGEAKGLVEERILDILIGPDGTGTNKSSRDSFRSMLRDGLLEDHELEVDVPEN 274
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A836CKY0_9STRA (ATP-dependent hsl protease ATP-binding subunit hslU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.330e-17 Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILV-------GEKSNPALRDSFENMLKNGMLEDMK-KMKVPLNRSNTPDMPGVILSDNT 386
+KVEATKFTEVGFHG DVD+IIKDLVE+ ITM KK +ME HR + K E ++D+L+ G +S R+SF +L+ G+LED+ + VP +R P + L NT
Sbjct: 162 IKVEATKFTEVGFHGGDVDQIIKDLVEISITMVKKARMENHRAAARLKAEDTVLDLLLKAPIDLEGNRS----RESFRKLLRQGLLEDIAVDVDVPADRG----APSLQLDQNT 267
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A7S4K9Y1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9Y1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.380e-17 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEK----SNPALRDSFENMLKNGMLEDMK-KMKVPLNRSNTPDMPGVILS 377
+KVEATKFTEVG+HG+DVD+II+DL+++ + +TKK+Q E+ REE K E I+D+L G SN RD+F ML+NG L+D ++ VP N D G + S
Sbjct: 164 IKVEATKFTEVGYHGRDVDQIIRDLMDISMVLTKKRQTEKLREEAKALVEERIIDLLAGPSNTGPSNKRSRDTFRAMLRNGDLDDQTVEVDVP---ENAGDKGGALFS 268
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A7S3JUS6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUS6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.540e-17 Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLEDMK-KMKVPLNRSNTPDM-------PGVILSDNTRFS 395
+KVEATKFTEVGFHG+DVD+II+DLVEV + +T+KK+ EE R E K E+ I+D L G + + SF +ML+ G+L+D + + +P +RS + P +L++ R+S
Sbjct: 159 IKVEATKFTEVGFHGRDVDQIIRDLVEVSMILTRKKKAEELRPEAKIAVENRILDTLTGSNAARTTQSSFRDMLRKGVLDDRQIDVDLPNDRSGGQGVIQVDTSNPNALLNEVLRYS 275
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A5D6XXH3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.560e-16 Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPALRDSFENMLKNGMLEDMK-KMKVPLNRS-NTPDMPGVILSDNTRFSMP 401
+KVEATKFTEVGFHG+DVD+II+DLVE ITM KK++ E R+EV+ ES I+D L G R SFE +L+ G +ED + VP+ R+ N +M G I + ++P
Sbjct: 145 VKVEATKFTEVGFHGKDVDQIIRDLVENAITMVKKQRKERVRKEVQHLVESRILDALTGANVTERSRASFERLLRLGEMEDRTITVDVPVARNHNANNMNGPISFVTSEKALP 257
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Match: A0A7S2RAH1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RAH1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.580e-16 Identity = 47/110 (42.73%), Postives = 75/110 (68.18%), Query Frame = 3
Query: 69 MKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMEEHREEVKEKTESIIVDILVGEKSNPAL-------RDSFENMLKNGMLEDMKKMKVPLNRSNTPDMPGVILS 377
+KVEATKFTEVG+HG+DVD+I++DL+++ + +TKKK+ +E REE K E I+D+L+G S RDSF +ML+ G+L++ +++++ + S+ GV LS
Sbjct: 145 IKVEATKFTEVGYHGRDVDQIVRDLMDISMNLTKKKKTDELREEAKLLVEDRILDLLIGSPSTTPSETQKGRGRDSFRDMLRQGLLDE-QEVEIEVPESSPDKSNGVFLS 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig669.1.1 >prot_P-littoralis_Contig669.1.1 ID=prot_P-littoralis_Contig669.1.1|Name=mRNA_P-littoralis_Contig669.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp MVLLLLLLLLMLFMKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQback to top mRNA from alignment at P-littoralis_Contig669:10547..12406+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig669.1.1 ID=mRNA_P-littoralis_Contig669.1.1|Name=mRNA_P-littoralis_Contig669.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1860bp|location=Sequence derived from alignment at P-littoralis_Contig669:10547..12406+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig669:10547..12406+ >mRNA_P-littoralis_Contig669.1.1 ID=mRNA_P-littoralis_Contig669.1.1|Name=mRNA_P-littoralis_Contig669.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig669:10547..12406+ (Pylaiella littoralis U1_48)back to top |