prot_P-littoralis_Contig667.14.9 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig667.14.9
Unique Name	prot_P-littoralis_Contig667.14.9
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	556

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot
Match: A0A6H5L4D8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D8_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 1.250e-136
Identity = 306/458 (66.81%), Postives = 337/458 (73.58%), Query Frame = 0

Query:  122 FGHHGVGYGAG---------------GFRXXXXMGXXXXXXXXXXXHHGYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVSAQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNNGGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGKIPLQGIADGKMRWWTVTSGGQMQASVFSDVQF--TNRTTSNGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPHAAGTAGSGNQNGLRNEYNRYVSGMNSAGRNSEVLSFQAWAGGRHRDGRSSGSSRGSXXXXXXXXXXXXXXXYGRGHH-----RKHGYGDHGGATGYAVPGGATSGDFPPAGYAHGYPTAPGAAGADFQSPQYRPPATAPSAPPAYPGATSYPTAVGVPAQXXXXXXXXXX--PQQHGGVFYNPNSKQ 555
            FGHHG+G                   G      MGXXXXXXXXXXX  GYRGS+MRLPWMGVLAATAVA GAAA YPRGARSQVTWKEGSKQVSAQ+GGLTVNVA AQNL SV+T+STQDPYVKAKLLVDGYQ+SEVKSGTHNNGG+NP W GRNNFFTFYVPSNVPL KLAVVLE++D N+MS+DKMIGTCGKIPLQGIADGKMRWWTVTSGGQ+QASVFSDV+F  T  + S GQ+  XXXXXXXXXXXXXXXXXXXXXXXXXXX R                NEYN YV+GMN+AGRN EVL ++AWA GR+RD R   S    XXXXXXXXXXXXXXX  R H       +HGYGD+ G T YA P G+ +G  PP      Y    G A A+FQSP YRPPATAPSAPPAYP AT+YP A   P QXXX         PQQ GGV+Y+ ++ +
Sbjct:   42 FGHHGIGGXXXXXXXXXXXXXXXXXMGISGGYGMGXXXXXXXXXXXXXGYRGSAMRLPWMGVLAATAVASGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQVSEVKSGTHNNGGRNPSWAGRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQKQHXXXXXXXXXXXXXXXXXXXXXXXXXXXSR----------------NEYNNYVNGMNNAGRNHEVLPYEAWANGRYRDNRRRESXXXXXXXXXXXXXXXXXXXXXRKHQYGGGGSRHGYGDNRGHTKYAAPAGSNAGYAPPTALPP-YTYGAGGAPANFQSPDYRPPATAPSAPPAYP-ATAYPPAASAPGQXXXPPPYPRATAPQQ-GGVYYSQHASK 480

[Close]

BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot
Match: D7G451_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G451_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 5.830e-104
Identity = 163/190 (85.79%), Postives = 176/190 (92.63%), Query Frame = 0

Query:  155 GYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVSAQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNNGGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGKIPLQGIADGKMRWWTVTSGGQMQASVFSDVQF--TNRTTSNGQQ 342
            GYRGS+MRLPWMGVLAATAVAGGAAA YPRGARSQVTWKEGSKQVSAQ+GGLTVNVA AQNL SV+T+STQDPYVKAKLLVDGYQISEVKSGTHNNGG+NP W  RNNFFTFYVPSNVPL KLAVVLE++D N+MS+DKMIGTCGKIPLQGIADGKMRWWTVTSGGQ+QASVFSDV+F  T  + S GQ+
Sbjct:  113 GYRGSAMRLPWMGVLAATAVAGGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVKSGTHNNGGRNPSWARRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQK 302

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot

BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L4D8_9PHAE	1.250e-136	66.81	C2 domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D7G451_ECTSI	5.830e-104	85.79	C2 domain-containing protein n=1 Tax=Ectocarpus si...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 205..315 e-value: 8.9E-6 score: 35.2
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 206..309 e-value: 2.1E-10 score: 40.8
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 184..318 score: 12.459881
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 200..371 e-value: 6.0E-17 score: 64.1
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 199..324
None	No IPR available	PIRSR	PIRSR000550-2	PIRSR000550-2	coord: 202..369 e-value: 1.6E-10 score: 37.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 445..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..555
None	No IPR available	PANTHER	PTHR47052:SF3	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)	coord: 204..543
None	No IPR available	PANTHER	PTHR47052	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)	coord: 204..543
None	No IPR available	CDD	cd00030	C2	coord: 206..308 e-value: 1.0814E-12 score: 62.4695

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig667	contig	P-littoralis_Contig667:94288..103231 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig667.14.9	mRNA_P-littoralis_Contig667.14.9	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig667 90909..104362 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig667.14.9 ID=prot_P-littoralis_Contig667.14.9|Name=mRNA_P-littoralis_Contig667.14.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=556bp
MPDLSDFGGLGGLTGAAGGLGALAAIAGGGGGRRGGGGGHGHGHGGGGGG
GVGGLGGVSAIGLLAGMAGGAAMGGNHNRNRYNNHRNDYNNYRNHRNNHH
YGGGGYHNGHGGHGGFGGGGGFGHHGVGYGAGGFRSGYGMGGMGGYRGYG
GGHHGYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVS
AQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNN
GGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGK
IPLQGIADGKMRWWTVTSGGQMQASVFSDVQFTNRTTSNGQQQQQQQQQQ
QQQTSAKNDKDKSKKKKKKKHRRPHAAGTAGSGNQNGLRNEYNRYVSGMN
SAGRNSEVLSFQAWAGGRHRDGRSSGSSRGSDSSSSSSSSSDSDGDYGRG
HHRKHGYGDHGGATGYAVPGGATSGDFPPAGYAHGYPTAPGAAGADFQSP
QYRPPATAPSAPPAYPGATSYPTAVGVPAQPQAPPPYPGAPQQHGGVFYN
PNSKQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR035892	C2_domain_sf