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Homology
BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot
Match: A0A6H5L4D8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D8_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 6.770e-131 Identity = 306/458 (66.81%), Postives = 337/458 (73.58%), Query Frame = 3
Query: 567 FGHHGVGYGAG---------------GFRXXXXMGXXXXXXXXXXXHHGYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVSAQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNNGGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGKIPLQGIADGKMRWWTVTSGGQMQASVFSDVQF--TNRTTSNGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPHAAGTAGSGNQNGLRNEYNRYVSGMNSAGRNSEVLSFQAWAGGRHRDGRSSGSSRGSXXXXXXXXXXXXXXXYGRGHH-----RKHGYGDHGGATGYAVPGGATSGDFPPAGYAHGYPTAPGAAGADFQSPQYRPPATAPSAPPAYPGATSYPTAVGVPAQXXXXXXXXXX--PQQHGGVFYNPNSKQ 1868
FGHHG+G G MGXXXXXXXXXXX GYRGS+MRLPWMGVLAATAVA GAAA YPRGARSQVTWKEGSKQVSAQ+GGLTVNVA AQNL SV+T+STQDPYVKAKLLVDGYQ+SEVKSGTHNNGG+NP W GRNNFFTFYVPSNVPL KLAVVLE++D N+MS+DKMIGTCGKIPLQGIADGKMRWWTVTSGGQ+QASVFSDV+F T + S GQ+ XXXXXXXXXXXXXXXXXXXXXXXXXXX R NEYN YV+GMN+AGRN EVL ++AWA GR+RD R S XXXXXXXXXXXXXXX R H +HGYGD+ G T YA P G+ +G PP Y G A A+FQSP YRPPATAPSAPPAYP AT+YP A P QXXX PQQ GGV+Y+ ++ +
Sbjct: 42 FGHHGIGGXXXXXXXXXXXXXXXXXMGISGGYGMGXXXXXXXXXXXXXGYRGSAMRLPWMGVLAATAVASGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQVSEVKSGTHNNGGRNPSWAGRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQKQHXXXXXXXXXXXXXXXXXXXXXXXXXXXSR----------------NEYNNYVNGMNNAGRNHEVLPYEAWANGRYRDNRRRESXXXXXXXXXXXXXXXXXXXXXRKHQYGGGGSRHGYGDNRGHTKYAAPAGSNAGYAPPTALPP-YTYGAGGAPANFQSPDYRPPATAPSAPPAYP-ATAYPPAASAPGQXXXPPPYPRATAPQQ-GGVYYSQHASK 480
BLAST of mRNA_P-littoralis_Contig667.14.9 vs. uniprot
Match: D7G451_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G451_ECTSI) HSP 1 Score: 327 bits (837), Expect = 2.280e-99 Identity = 163/190 (85.79%), Postives = 176/190 (92.63%), Query Frame = 3
Query: 666 GYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVSAQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNNGGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGKIPLQGIADGKMRWWTVTSGGQMQASVFSDVQF--TNRTTSNGQQ 1229
GYRGS+MRLPWMGVLAATAVAGGAAA YPRGARSQVTWKEGSKQVSAQ+GGLTVNVA AQNL SV+T+STQDPYVKAKLLVDGYQISEVKSGTHNNGG+NP W RNNFFTFYVPSNVPL KLAVVLE++D N+MS+DKMIGTCGKIPLQGIADGKMRWWTVTSGGQ+QASVFSDV+F T + S GQ+
Sbjct: 113 GYRGSAMRLPWMGVLAATAVAGGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVKSGTHNNGGRNPSWARRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQK 302
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 227086.JGI_V11_72858 |
| PFAMs | C2 |
| Model size | 3002 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K18626 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Evalue | 0.000213 |
| EggNOG OGs | 2E5CA@1|root,2SC63@2759|Eukaryota |
| Ec32 ortholog description | C2 domain |
| Ec32 ortholog | Ec-02_002190.1 |
| Description | Protein kinase C conserved region 2 (CalB) |
| Cds size | 1668 |
| COG category | S |
| BRITE | ko00000,ko04812 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791387.8864198-UTR-P-littoralis_Contig667:90908..90949 | 1680791387.8864198-UTR-P-littoralis_Contig667:90908..90949 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig667 90909..90949 + |
| 1680791387.899442-UTR-P-littoralis_Contig667:94125..94287 | 1680791387.899442-UTR-P-littoralis_Contig667:94125..94287 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig667 94126..94287 + |
| 1680791387.9924657-UTR-P-littoralis_Contig667:103231..104362 | 1680791387.9924657-UTR-P-littoralis_Contig667:103231..104362 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig667 103232..104362 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791387.9110665-CDS-P-littoralis_Contig667:94287..94618 | 1680791387.9110665-CDS-P-littoralis_Contig667:94287..94618 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 94288..94618 + |
| 1680791387.9256945-CDS-P-littoralis_Contig667:96151..96426 | 1680791387.9256945-CDS-P-littoralis_Contig667:96151..96426 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 96152..96426 + |
| 1680791387.936695-CDS-P-littoralis_Contig667:97729..97840 | 1680791387.936695-CDS-P-littoralis_Contig667:97729..97840 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 97730..97840 + |
| 1680791387.9532628-CDS-P-littoralis_Contig667:99663..99861 | 1680791387.9532628-CDS-P-littoralis_Contig667:99663..99861 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 99664..99861 + |
| 1680791387.9668303-CDS-P-littoralis_Contig667:101459..102038 | 1680791387.9668303-CDS-P-littoralis_Contig667:101459..102038 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 101460..102038 + |
| 1680791387.9783988-CDS-P-littoralis_Contig667:103057..103231 | 1680791387.9783988-CDS-P-littoralis_Contig667:103057..103231 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig667 103058..103231 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig667.14.9 >prot_P-littoralis_Contig667.14.9 ID=prot_P-littoralis_Contig667.14.9|Name=mRNA_P-littoralis_Contig667.14.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=556bp
MPDLSDFGGLGGLTGAAGGLGALAAIAGGGGGRRGGGGGHGHGHGGGGGG
GVGGLGGVSAIGLLAGMAGGAAMGGNHNRNRYNNHRNDYNNYRNHRNNHH
YGGGGYHNGHGGHGGFGGGGGFGHHGVGYGAGGFRSGYGMGGMGGYRGYG
GGHHGYRGSSMRLPWMGVLAATAVAGGAAAVYPRGARSQVTWKEGSKQVS
AQIGGLTVNVARAQNLSSVTTVSTQDPYVKAKLLVDGYQISEVKSGTHNN
GGKNPDWTGRNNFFTFYVPSNVPLAKLAVVLEVFDSNSMSSDKMIGTCGK
IPLQGIADGKMRWWTVTSGGQMQASVFSDVQFTNRTTSNGQQQQQQQQQQ
QQQTSAKNDKDKSKKKKKKKHRRPHAAGTAGSGNQNGLRNEYNRYVSGMN
SAGRNSEVLSFQAWAGGRHRDGRSSGSSRGSDSSSSSSSSSDSDGDYGRG
HHRKHGYGDHGGATGYAVPGGATSGDFPPAGYAHGYPTAPGAAGADFQSP
QYRPPATAPSAPPAYPGATSYPTAVGVPAQPQAPPPYPGAPQQHGGVFYN
PNSKQ* back to topmRNA from alignment at P-littoralis_Contig667:90909..104362+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig667.14.9 ID=mRNA_P-littoralis_Contig667.14.9|Name=mRNA_P-littoralis_Contig667.14.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=13454bp|location=Sequence derived from alignment at P-littoralis_Contig667:90909..104362+ (Pylaiella littoralis U1_48)
CTCTCCGTCTCCCGCAGTCCTCCTGTTCTAGTGGCTACGCGGTAAGTCCT
TGAAATGATTCCTTGTCTGATGCCCCAGGTGTGCGTCGCAGTTGGGTGAA
CGAGCTAGTCACGACGTGGCGTGTAGAATGAACGGGGGTCTTCCGCGGAG
ATCAGCAGCGAAGTCTACTGTATCACAGACCGCTGTGTATCATTCACCTG
AAAGTAATACCAGCGTAACTTATCCTGGCGTTGACGACCAACAAGCTGAT
GCTCTAGAGTCTATCCTTCTTGTTGGGGGTGGTGTGTGTGTGTGTGTGTG
TGCTCAAGGCGTGCAAGGACCGCAGCCCACCAGAGGACGCAACAGTTGTA
AAAACAAATGGGTGTCATATCATAAGTTCCGCCGCCTGAACCTCCTCAGA
GCTGCATTTTTCATTTTTTTTACATTTTGACTCAATTTTTACGATCAGCA
CAGCTGTGCAGTCGGTGGCACAGTAGTACTGCGGCATGATGTTCGAGTAC
TTTAGTTCTTCGTTGCTAGGAAGTACTGAGTATAAACGAATTATCTGAGA
GCAAGTATTATGTATGATACGAGTATGATACAGGTAAGTGTACATCTCAA
TCATCGAGATGTTTCTACTCAAATGCCTACCCTTCTTCCTGTGACTACTG
AAATCGTCCATGATCGGAGGAGTACGGACATTAGAGGGTATGGCTTTTGT
GTGAAGACAACACACATGACACACATGGGACTGCTGTGCGAAGTATATTG
ACACTGCTGCTGTATGTATCCACCAGCCAAGACATCTCTTCCTTCATCAG
ATTTCTCTACCGCTGTACGACTGGGTTTCTGTGCGGGCTAGTTTTGCCTT
GACGTGCCTGCTGTGTTTGCGCTTGTGCGTGCTCGTGTTGCTCCTCTGCC
TGTCACCATTCAACCTGCCCGCAAGTAAAGAAACTGAATATCGGCCCGAG
GCTGGGTCTCTTGTTCTATGGCTACCATTTAGAGCACGCCGTTTCTTAGC
TACCATATTCTTCGAAGTAGGATTTAGCGTGGGGCCGGTCGCTGAGCCAT
TTTTCTTGCGCCGAACTTCTTAAATTTTCAAAAATGTCAGCCTTATTTTC
TTTCTCGTGTGTTTCTTACTTGCGGACCGGTACTTTTCTGCTCGTTTGGC
ATTCGTCGCCCGTGCCCCCCTTGCTCTCACCCTCTCTTCGCCGAGTTGCG
ACTTCTTCTTTTTTTCTCCTACAAATACATCAATCTACTCGCCCCTCTCA
AGACGAGAATCTAGAGGAGAACAACAAACGAACGCAGAGGGTTTTTCATC
GTAGGAGAAGGAAAGCTTCTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTTGCGTCACAGCTCGGTTGTTTGTATTGGTTCTGCTCGGCTCTTTACC
ACGGCTGTCCTCCCATCATGGGCCTCCTGATACTGCCTGGGGTCGCGGGT
CTCCTCACCCTGGCTGATCGCTGAGATCTGGTCCGGGGTCCCAAACCTAC
TGAACGCGGCGCATGGTGCAGTACAAGTGTATAGGAAGATTTGAGAAAAA
ACGGAAAGTGAAGGGAAAAGTTTATACGAAAGGCCAAAGAAGGCACGCCT
TGTATCGACTGAACTGACGGCGATAGGGGTATTCATTCGACGAAAACAAA
ACGGGGTGTTCATTCAGTCTTCCCTCGCTCCGCTCGTATCCACTCGTGGC
TGCAGACTACAGCGGTTGCTGCCTTGAGTGCTGCCACCCTCAGTGACGAG
GCCTTGGGTGAGCTGTCAAAAACGCCGAGACCGGCAGGCAGTGCAGGTGA
CATAAGCAAAAATCAACGAGAGCCACCCGCGCACCATTTGGCAATCGAAG
GGCACCGCAAAAAACACGCCATCAATATTGCGTAAATTACGTTTGGTCAT
GGGGGATATACATGTGCGGAGAGCAGCGGCATCGCGTGCAAGCGTGCCCA
GCAGATCTCTTAGCTTGATGCCATTTGTGGCTGTTGCGTGCATCTGGATA
TAACTTATGTGCAGTTCACGGGGACAGCTTTACAGCGGTCGTTTCTGACT
GCTTGCTGGCAAGGCACGGGACACCACTCACGTACAACCACGCGGCACAG
CAGGCTGTGGTCATTTTTTTCTTTCTTTGTTTGTCGGGTGTAGTTGCTTT
CGACGAGCTTGCGATGTCCGCCACTTGAGGGCAGAGAGTTGTCTCTGCAG
TGATCCGCGATTCTTGTTACACCGTTTTGTCTGATGGACGATGGCGCTCA
AAGCGGTCTCTTCAATCAAGCACCTCGGCTTCGCGCTTCGAGGCCACTAC
CGAGAAGCTCCGCAGGGATGCAGTCGTGAGAGGAGCCCAAGCTGCTGTGA
TGGAGATGCGAAGGTTTATGATACGAAGCAGTGTTGGAGATTGAGCCCAA
AAATATTCTCATACATATATATATTTTTTTGGATCGAGGAAAAAAAAAGC
GATCGTCGATCTTTTTTCGATACTCGAGAAAATGTCCGATACCGACAGCG
GTCCGCGGACCGATCCCAATTTCAATCGCGATCAGGTCGATCTCGATGTC
GATACGGCCAATCTCAATGTCGATACGGCCGTATCGAGAGACCGACACCG
ATTTCGAAAGGGGGGACGAAGAAAATAACGCGGGGGGTAGGTGGATAAAG
GAGGTTCGGTGTTTGAAAAACAGTATCGGAGTATCGCGTCCAAAATTCCC
GATACTGATGCAACCGGATCGGGATCGATACCGCGATATTTTTCTCAAAT
TCGATCTCGATCTCCAGCACTGATACGAAGGCAAGGAGGTGTGCGTGTCG
CCTGGGGCTTCAAGAGGAGAGGGTGGGACATCGAGCGTACAGCAGTCGAG
ACTTGGGGGGGGATGGGCACCGCCAAGATTTTCGACCTCGACAACAAACG
ACGACGTAAACTTGAGCCAAAAATACCATCTCAGAGCCCCGGGATATCAG
GTAGCCTCCCCCCCGCCGCCCAGCGTCTTCTTCACAAGAAATCGCGCGAA
AACATTGCAGGGCAGCCCGAAAGGATAGGGTGTGCTTTTTCCCTAGGCCG
GCTGCAACCCGGGATCTTGTTGGCTTTGCAGTGTTGTGTCTCCTGCGCCA
ACTCTAGTCGTATATGGACCAAAAGAGGCCATAATTTGGCACTGTTGTGT
TTCAAGAAGTCGAGCCCGCGTTTCTCACTGATGTACCACCGTTATGTCGC
TGTATTCGTTCCAGAAGACAGGAAACAGGCAACAGCAAGAACAAGAGCAA
CCAGCAGCAGCAGCAGCAGCAGAAAGCAGCGACACAAACGTGGGGAGCAA
GCAAGCAAGCAACAACCGCAAAAGAGAGGGCAGAACTGCGGGGCGCGCGT
GCAAAAACACTCGCCATTATTTCATCAGCATGCCGGACCTCAGCGATTTC
GGGGGCCTCGGCGGCTTGACTGGTGCCGCAGGGGGCCTCGGTGCCCTGGC
GGCGATTGCCGGAGGAGGGGGTGGGAGACGTGGCGGCGGCGGCGGCCATG
GGCACGGCCACGGCGGGGGCGGCGGCGGCGGCGTCGGTGGGCTGGGCGGG
GTGAGCGCAATCGGACTGCTGGCGGGAATGGCCGGCGGCGCGGCGATGGG
CGGGAACCACAACCGCAACCGGTACAACAACCACCGGAACGACTACAACA
ACTACCGCAACCACCGCAACAACCACCACTACGGCGGCGGGGGCTACCAT
AATGGGCACGGTGTGTGTGTGTATTTTGTTTTGCGCATTTATTCATTCAA
GGTTGTTTCTCTGTACACGAAGTGTATACCAGGTATTTGTTTTTGTAGCC
GTGGACGCAGTAACGCCAACACCACCGCCGCTGCCGCCACCAATACCACT
ACCACCACCACCACCACCACCGCTAACAAACAACAGCAACAACGACAACA
ACACGGACGAACGAAAGAAAAGCACAGCCACGAACAAAAGCAACAAGTGT
TGCACGCCCTCACCCCTCGCCGTCCTTTTGGTGCTGCGGCACTGGTGGGT
CTGAACGCAGCACGACGAGGGAATCACCGCGGACGCTGCGCGCCCTTCTC
ATTACTTTTTTTTCTTCGTGACCAGCCTTCGAAAAGCGAAGGGCGAAGGG
GGGGGGGGATAGGAGTTGCGGTCAGGGTGTCGAACGCAAATCTGGAGCGC
ACAGCAATTCGTTAACCTCGTGCTGTCGGAAGGGTTATCATATATTTTTC
TCGTCGCGAAAATCGTGGCCCCGTAACGAAACAGAGACGAGCGGGGCAAG
AGGCAGATACGGCACTTGGGGAACGTCGTTGCGAGGCCGAACACGTGTCT
TTTCAGCCATGGCCGGAAAAGGAGTCCTGTTTTTCCCCTTCGACGGGGTG
ATTGAGTCGAGTTTGCGCTTGTCGCGACGGCTGCGCTAACGAAACGGAGG
AGAAAATCAGACGGAAAAGGGGCAACTGTTGTTGTCGTCGTCGTCGGAAT
TAGGGTCCGAAGTGACCATGTTTCGCGGCGGGCCAACCCTCGGCTTTCTT
TTCTTTCTCGCGAGATTGTGAACGGTTGGTTCGGTTCTCTTGTACATATA
CTTCGTATACGAGTAGAAGGAGTCAGAGCGGTCGCCTCGTCTCATCTGAG
ATGGCGGTTGATGGTCTAAGGATGTATGGAACAACACAACGGGTATTTCT
CTCGACATTCACTAACCCCCCCCCCCCCCCCCGCCTCCAAGAAAGGACGT
GGCGCGTTTCTGTTTCATTACGTGTCGTACGATATTTTATTTTGGTGGCA
AGTTTTAGCTCTTCTCTTCACGAGAAATTCCATGTTTGATATATCTCCTA
TAAACCTTGGGCGTTTTTGTCCCAGTACTTGTCCTGTGCTTTTTTTTTTT
TGCCAATTTTGTGCTCGACCCTCAACGACAGCTACATGTTTTACCTTTCT
CTGAAGAAAAGAACGGAACCAGCCGTTCGTATTCTCGATGTGCGTGTTGG
CAGATGGCACGAGTTTTTCGCCCACGAGGAGCTTTTCTTCGCCACAACAA
ACACCAAGAAAATAACCGAACACCAAACACAACACAGGAAAAAACAAACA
AACGACCAAACAAACGACCAAACAAACGACCAAACAAACAAACCAACAAA
CCAACAAGCCAACAAACCAACAAACCAACAAACCAACAAACAAACAAACA
AACAAACAAACAAACAAACAAACAAACAAACAAACAAAACAGAAGACCAC
CGAATGCATGCATCCACAAACCCACCACCACTTTATGACATAGGCGGACA
CGGAGGGTTTGGAGGCGGAGGAGGCTTCGGACACCACGGAGTCGGCTACG
GCGCAGGCGGCTTCCGCTCGGGCTACGGCATGGGAGGGATGGGCGGGTAC
CGCGGGTACGGCGGCGGCCACCACGGCTACCGCGGGTCGTCGATGAGGCT
GCCGTGGATGGGGGTGCTTGCGGCGACCGCGGTGGCCGGCGGAGCGGCGG
CCGTGTACCCCAGAGGGGCGAGGAGCCAGGTCACCTGGAAGGAGGGCAGC
AAGCAGGTTTCCGCGCAGGTGTGATGGCATATAACATGATATATCATGGG
CGCGAGTAAACACCTCCGTGTTTCCGTCTTGCTTCGGTGTGTGACGGTGT
GTCGAATTGTCGGTGTGTGTCTATGTTTGTTGTTATCGTCTCTCATCTTT
TTGGTAAACCGGTCAGTTGAGCGTATTAGCCGGGGTCGTCACACAGATAG
GCAGGTCGACACGCAGAAGGTACGATACGTGAAATGCCAGTCAGATCAGT
TTTATAGCCTTTTACTAGGGCAAGTGTCGGTGCAAAGGTTGGGTGATTCT
GAAGTAGGGCAGTGCGCAGCTGCCTGGAAAAATCATGGCCGGACGCGATT
GGATTTGTTTTTCAAGGGCCGGATCGAGTAAGGGGAGCATGCAGGACTTC
TTCGCAGGTATTTTAGGACAAGAAGAGCTTACTCGGCGGCATTTGGTATG
GTTATTCAACAAGGGATTTGGTCAGGGCCTGGGCTCGGGTCAGGGTGGGT
TCACGTGGAAAGGGGCAAGCCAGCAGGTTTCCGCCTCCATGCGTAAAGCT
TGGCGCTTTTCGTTCGCCTGCAGAGAACGAGGATCTGTCACAACAGTAGT
AGTGTTTGTTTTCTTGCTGGTGCGCCTTCTTTTTGTTAACTCCGTCGCTT
CCTCTGTATTTTTTTGGTCGTTAAAGAATCTGTTTTTTTATTTTTCGTAC
CTTCTTGTTGTTGGTGTTGTTGTTGTTTCGTACCCCGCACACCTAAAAAA
CCAAGCATGTACGCTTGAATTCAATCAACGTATTTACTCCGATTGTGTCG
AAATCGGACGTTCGGTGGGCTGAGCCCCCGACCCCCGCCCCCGACCGCGT
TGCTCTTTACACTAAGGAGACGCGGATGGGGGTGTTCGAGTACTACGAGA
GGCGTGCCTAAGGGCGGGGGCAGGGACTAGGGGTGGGTGGCTTTGGTACC
TCAAAGGTTTGTCCTCCGGTCCCGGCGGCTTGACCGTAACCTCACCATCC
TACGAGTCCGGTACTATTTCCTTTTTCCGTTTGTGTTTGTTCCTGGAGGC
CGCTTGCAATCCACCACCTTGGTAGGTACTCCGCTCCCCGATCTGCTTTG
ACTGATGAACCGGCGGCCTTCGAACCGAACCGCTGCCTTCTTCGCTTTGT
ATCAAAGCATACGATAGCGCCTGGCAACACACCGTTGCACAATCGAGCTT
ACTTCGAAATGTACGCCATCCTCGAAATGCCTTTCTCATCCGACTACCCC
CATCACCTCCCCGCCCCCGCCCCCCACTCACCCACTCACCCCTCCCCCGT
CCACACCACACCGCGGCGCAGATCGGAGGCTTGACGGTGAACGTGGCCCG
CGCACAGAACCTCTCGAGCGTGACGACGGTGAGCACGCAGGACCCATACG
TCAAGGCGAAGCTTCTCGTCGACGGGTACCAGGTGCGGCAAACAACCAAC
CTCAACCATTTTACACAGCATGTAGAAGCCAAGACACTTTCGCAAATCTC
GTACCCTACTGCTGTAAAGTAAGTACACCCACAAACCAAACAGTATGGCC
GCCTGTTGTTCACGTGTCTCCGGAAGACCGCTGTGTACGGCGGTACGCAC
GCGGTTCCGTTTTCCGTTCGTTTTCCGGCACAAAGCGCCCCGCCTGGCTC
ACCTCGAAACCCCGGCCCCTCCGCTTCGTGAAGAGGGCTGTGCCTGGTTG
TTACCTGGGAAACGAAAAACCCCCCGGTAGATATCAATGAGAGGTGTTCA
AAGGAAGATTTTTTTTTCTCACGAAACGCAATCTAGCGGCGAGATTATTT
TTTCTTTTCAACCGACGCCAGCGAGAGACCCAGTGAGCCCCCTCCTTTTA
TGCTTTTTATCGCGGAGCTTGCGAAAGACCTACCTCTCGGTGCCACCGAT
GATGCGTCGAGGGATATAGATACCCGTGTGCGGAAGGCGAAAAAACGGTC
GGCCCGTGGCGCGTCCCCCCGTGTATTGTCGGTCTCCCGCACAGCAAGCA
GCACGGTACGTTGCTGGTGGTGTTGATCTCGCGCCGATGGCCGTATCGTC
GTGGGAGAGTTTGCGAGTAATTTGCAGCCGAACCAGCTTGGTCAGGTCAC
CGCGACGTTGCCGGAGGCCCTGCGTCGGTGGCAATCCGCGATGACGACAG
GATCGCGCGGCCGGGCAAACAACATACGTCACTGACCAGGAAACGTCTTT
ATTTTTCCACTCGCGGAGACGTGTGCCTTCTGGCGTAGGCCCAACGCACT
CTTCGAAACCAGTTTATCTCGTTTTCAAAAACGTCGCGGAGTGAGTACGT
ATGATATGCATCGATAGGTTGGAGTAGAATGCGTTCCTGCGAGAGTGTGC
GTTTTTTTTTTTTTGTCTTGCGCGCAACATGGGCAGCGCTACGTAGCATG
TGTGCCTCTTTGCACTGAATGAGTCGAGATGAGGTGTGTGTGTTCCTTTG
CGGACAGGCCTGGCGCCCTGGCTGGGGGTGCTGGACGTATGTTTGTGCGT
ACAGGCGTTTTTGGCGAGCGGCTGTGGCCTGCTGGTGCGTGCTGTTTCTG
CCCCGACATCGAGCCGAGCTGCCAACATGATGGTATTGCCAGTACCGTGA
GTCATGTGCCGTTTTCCGCATGCAAGCCCACGGGTCAAGGACTCATAAAT
CACACCGTGTGGTCGTCTCGTTTCGTTTTGCCTCAATTTCTCTTTTCTTT
CTTCTCTTTCTCTTCAATACCGGTCGCCCCGGTGGTTCAGTTGGTTATCC
ACGCAACCTCCTGACATTCACCCGTGGGTTCGAATTCCAGTGCAGTAACA
CGATCTGGGGCTTTTTCTCACATTGCGCGTGAAAGTGGAAAGCGATCAAT
TCGTGAGTCAACAAAATTTAATCGTACCATCGACGAGAGGAAGGGATTGC
TGTCCCCTTTCTCACGTCTCGCGATAAAAGCTCAACCAAAAAAGGCAAGC
ACCGCAGAGGGAAGTGGAAAAAAAAAAAAACTCCTGTGTTGACTTCCGCC
TGTGTTACCCCGGTTGGAGCGTCTACCTACTACCCGAAAGGTGTAAAGTG
GCGTCCAATCAAAGGGATGACAACACACACACACTTCCTCTTTTTTTTTT
CTTTTTTTTCTCCCTTTTCCTTTCTCTTTCTCTTTCGCTCGCTATTTCTC
TTTTTCTTTCTCCATCTCCTTCTTTTTCTCTCTCTCTCTCTTTCCCTCTC
CCTTCTTCTGCCTTCCTCTCCCTCCCGGTCCCACGAAACAAAAAAAACAA
ACAAGATTTCGGAGGTTAAGAGCGGGACGCACAACAACGGCGGCAAGAAC
CCCGACTGGACCGGAAGAAACAACTTCTTCACCTTCTACGTGCCGTCCAA
CGTGCCGCTGGCCAAACTGGCGGTGGTGCTCGAGGTTTTCGACTCCAACA
GCATGTCTTCCGACAAGATGATCGGCACTTGCGGGAAGATCCCGCTCCAG
GGGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGTGAGTGAGGAAGGAAT
GAGTAAGTGTGAGTGAGGAATGAATGAGTGAGTGAGTGAGTGAGTGAGTG
AGTTGGTGAAATGTCTGATTTGTTTATGAGTCATTGAGTGCGTGAGTGCA
TGAGTGAGCGCGTGAATAAGCGAATGAGGGAGGGAGGGGGGGAGCGAGTG
AGTGAGTGGGTGGGTACGGGAGCGAGAAGTCAGCAAGTGAGTACGAAAGT
GAAGTGATTTGAGTTTTCGAGATTTTGAGGGAGTGCGGAAGAGGTGAGCA
AGTGAGTTTGTGTGCGTGTACGGACGGGATGATTGAGTAAGCGGATACGA
AAGTAGACTCGTGAGCGAATTGGGAAAGTGAATGAGTGAGTGCAATGCGA
GTGAAGAAGCAAGTGAATTCCGGTGTTCGTTAAAGAGTATGGGAGGGAGG
GGGGAGGGGAGGGAGGGAGGAAGGGGGTGGGTGAGTGAGTGAATAAGCGA
GTGAATTAAAGGGGGAGTGTATGAGTTAGTGAATTAGTGAGCGAACCAGG
AAGTGAGTGAGGTTATGCGCGAAAGCTGAGTGAAGGAGTGAGGAAATGAG
GGAGGAAGTGAGTGAGGGAGTCAGTGAGTGAGTGAGTGAGTGAGTGAGTG
AGTGAGTGGGTGAACGGGTGGCTATTGTAATTGAGTGAGTGAGTGAGTGA
GTGAGTGTGAGAGTGTGTGAGTGTGTGAGGGAGGCACGGAGGGAGGGAGG
CAGCGGGTGAGCACGGGAGGGGTGAGCTCGTGAGAACAGAAGTGAGAGAC
GGAGTGAATGATTAGGTCATTTTGTATGTTTGTAAGGCAGGGAGGGAGGG
AGGGAGGGAGGGGTGAGTTAATGAATACGGAAGTGAGTGAGTGAGTGAAA
AAGAAAGTGAGTGAAGGGCGAAGTGAGTGAGTGCGTGAATAACTGAGTGA
GGGAGTATGGGAGAAGTGAGTGAGTGAATTAAGTCGATGAGCTCACTGAA
ATTGGTCCACGCAGCTGCTCATAGTCTCGTATTTCGCTTCCAGATGTTTG
TGTGTTTTTCCTCTCCAAGACCGGCGTGCTTACACGCGTGTACTGTACTT
GTGACTGTGTGATGTTCTCCGTTCGTCCTGTTGGTTGATGACACTTTTTA
TTTGTATTTCTGGTCACCCCGTCTTCCAATCGAACCCTTTCTTGCTGACG
CCTCGTGTTTCCTCCGACAAATCTGCGGCTTCTCGGATAATTCAATCCTG
CCTCGTGCTCTGTCGGCCCGTCCTCCCTTCTTGGTTGTGTTCTGCTTCCC
GAATCGAACCAGTCCGCCGGCGGTGTTGGTCGTTAGCCGTGAGTGACGAG
CTGTGCTTTTTTTGCCACGCCGCCCGCGCGTGAGGCAATAAATACAGCTC
GTGCGCGCCTTCGTGTTCGCCCCCACGGCATTTTGTGATTCGCTTCTTGC
TATGATACACCCGCCCGGGATAAAGGGTGGACGAGAACGAATCACCTGAG
TGTTCATATTGTTTTTCTCACACCGCTTTTTCTTTTACTTTTCGGTTCCT
ATTTCGTGTGTGCGTGTCGGCCTGCCTGCTGTCGGTGTCTTTCGTCGACA
GATCGCAGACGGGAAGATGCGGTGGTGGACTGTCACCAGCGGGGGCCAGA
TGCAGGCCTCGGTCTTCTCCGACGTCCAGTTCACCAACAGGACTACCAGC
AACGGCCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGACGAG
CGCCAAGAATGACAAGGACAAGTCGAAGAAAAAGAAGAAAAAGAAGCATC
GTCGTCCGCACGCCGCCGGCACCGCCGGGAGCGGGAACCAGAACGGTCTC
CGAAACGAGTACAACAGGTACGTGAGCGGCATGAACAGCGCCGGCCGGAA
CAGCGAGGTGCTATCATTCCAAGCCTGGGCCGGCGGGAGGCACCGGGATG
GCAGGAGCAGTGGCAGCAGCCGCGGCAGTGACAGTAGCAGTAGCAGCAGC
AGCAGCAGTGACAGCGACGGCGACTACGGCCGTGGGCACCACCGCAAGCA
CGGGTACGGCGACCACGGGGGTGCCACCGGCTACGCTGTCCCCGGCGGGG
CCACGTCCGGCGACTTTCCTCCTGCGGGCTACGCCCACGGTTACCCCACA
GCCCCGGGAGCCGCCGGAGCTGACTTCCAGGTAAAAAACAAGAAAAGCCG
TCCTCTGGCCGGTGTACCCATTTTGCACGCCGTCTCCAATGGCACCCCTC
GGTATCTTCGAGAAAAACCCAATCAATGGAAACCACCCATCAATGATCCT
ACGTCTTGTAATAAAGTGTTGGGAAGAATACCTCGAGAATCGTTTTATCA
TGTGTTTTGTCATGTGTACGTTCATGAAATTTTACCTCGTTACCATAGAA
GTCACGCGGAAACGCGGGAAACCCCATGTGAAAGGACTGTGTGGTTCGAT
AGGCCAACGTTCGTAACATCAGTTTAAGCTAGAGTTTGGCCACCAACCAG
ACCCGCGAGAAGCCTTTCGAGGTACATACCCTTGTGACGGGTGTGTCTGT
GTTTGTCATACAGCTAAGTGGTTGGTCCCGACCTAACCCAAGTGGTATGA
GGCCTTATAGACTTGGGCATTGGCCTTGAGTAGCATGACCCCCCACTTGT
AGCCCTGTCCAACGTCGACGACGGACTCGCTCCCTTCACTTTCGATGTCC
AATCTGAACGTCGTGTTGACGATTTCAGCACTTGCTTGGAAGGGAGGGCT
TCGTTTCCTGTTCAAATGCCATTTTTGTTTCTTCGTGGTATCATGCATGG
GGTGAATTTCCCTGGTGTGGCGTCATTTGGTTACGCGGAGCCCGCGCCGT
GTGGCGACTGGACTGTTCCGTTTTCGAGGTCGCCTGTCTTCGCGGTGTTG
TTTTTGTCTGCCTGGCGGCCCGGTGGACCTTCCTGGCGTCTCTCCCTCGG
CCCGCTCTATCAACTCAAACCGATGTGCATGCACGTGCTTGATGGCAAGG
ATAACGACGTGGCTGCACCAACACGCGTCAATTTTTTGTCACCAAGGAAG
CCCCCACTGCAATAACCTTTCTTGCGACTTTTCCACCACCTAGCTCCTGT
CCCACGAAGTACCCCCCCCACACCCACCCACCCACCCACGCACCCTCCCA
CCCATCCTCCCACCCACCCACTCACCCGTCGGGTATCTTAATATCGCAGT
CGCCCCAGTATCGCCCCCCGGCAACGGCACCTTCTGCGCCCCCGGCCTAC
CCAGGCGCCACCAGCTACCCGACTGCCGTTGGTGTGCCGGCGCAGCCACA
GGCGCCGCCGCCGTACCCCGGGGCTCCGCAGCAGCACGGTGGGGTATTCT
ACAACCCTAATTCCAAGCAGTAGTCCCACCATGGTACAAAATAACACAAA
AATAGTGTCGGGGAGTCCAAAGGCGACATGTGTACAGCAGGAGATATTCC
GGACGGCTTGCTTTTTGATAAGAGTATAGCGGAAGCTGTCGCTTTTTGTT
CGTGTACAACCTTTTTTTCAGCTCGAGAGAACGTGCTGACGGGAGTCGGA
GGAAGTGAGTTCCCAAGCGTTTGTCCTGCAACGATTTTGAAGCAAGCCGT
GTTACAAAAGGATTCATAAATCCGATTTCAGAACCAAAAAAATGAGGGAT
ATGATATGCGTTGATTTGGGTGGGTTGGGGATGGTATGGGGCGAACGGTA
ATGAAATAGGATAGGGGATGGGATAGGGATTGGTCGAAATTTTTGTCCCA
GCGCAAAGTACCACCCCATCACCACTCTGCTTTGTTCAGAGCCAGCCGTT
TCCATCTGCTCGCAAGTCTGCGTCTCCCGCTCCATCTGCAACCCACCCAT
TGCGCACTGCTGCCTGATTTCGTTGGTACGACATATATATGGAGTTTGGG
GTGTGAACATTCTCGGTCCCTTTTTGGTTCGTTCGAAGTGATACATATGT
TGGGAGCATGCGTGCTCCGTTTGACAGCCTGCACGACAAATTCTTGGTTG
CTAGTCAGGCGCACCACGGGCGCCAGGCGGTGAAACTGGCGTTGCCACTT
TGCCGCTTGTCGCCATTCACCTACCTATCGCTAACGTCTTGCTCGTCGGG
CGGTCACATGCATCACGACAAGGCTCTTCTTGTAGATTCGATGTGACCGA
CTGAAACGCCCTCGTGAAACAGTTTCGGTGCGCGGTTCTTTCGCTCGAGG
CTTCTGCTTGTCAAAACGCATGCATCATGAACGTACAGGTCTCTTGCAAA
CGCGCGGGGTGGCATACATAGCTTTTCCTCGGAGGTACAAACTGGGCGAA
GTTTCAGCGTGCTGCGTCCGGTCTTTCCCCAGTCGGTGCCGTAGTTGCTC
GCCTATACACCAGAGTTAATGCCCAGGTAACTGTCGGAAAGTGCCATGTG
ACGCATGTTGGGTCAAAAACATATCTGGCAAGATTCACTTCGAAGAGCTT
CGTTCGGAATTCGCGCAAGACTACCGCTGCCAGGGTGGCGGCCTCGTTCT
TGAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig667:90909..104362+ >mRNA_P-littoralis_Contig667.14.9 ID=mRNA_P-littoralis_Contig667.14.9|Name=mRNA_P-littoralis_Contig667.14.9|organism=Pylaiella littoralis U1_48|type=CDS|length=1668bp|location=Sequence derived from alignment at P-littoralis_Contig667:90909..104362+ (Pylaiella littoralis U1_48)
ATGCCGGACCTCAGCGATTTCGGGGGCCTCGGCGGCTTGACTGGTGCCGC
AGGGGGCCTCGGTGCCCTGGCGGCGATTGCCGGAGGAGGGGGTGGGAGAC
GTGGCGGCGGCGGCGGCCATGGGCACGGCCACGGCGGGGGCGGCGGCGGC
GGCGTCGGTGGGCTGGGCGGGGTGAGCGCAATCGGACTGCTGGCGGGAAT
GGCCGGCGGCGCGGCGATGGGCGGGAACCACAACCGCAACCGGTACAACA
ACCACCGGAACGACTACAACAACTACCGCAACCACCGCAACAACCACCAC
TACGGCGGCGGGGGCTACCATAATGGGCACGGCGGACACGGAGGGTTTGG
AGGCGGAGGAGGCTTCGGACACCACGGAGTCGGCTACGGCGCAGGCGGCT
TCCGCTCGGGCTACGGCATGGGAGGGATGGGCGGGTACCGCGGGTACGGC
GGCGGCCACCACGGCTACCGCGGGTCGTCGATGAGGCTGCCGTGGATGGG
GGTGCTTGCGGCGACCGCGGTGGCCGGCGGAGCGGCGGCCGTGTACCCCA
GAGGGGCGAGGAGCCAGGTCACCTGGAAGGAGGGCAGCAAGCAGGTTTCC
GCGCAGATCGGAGGCTTGACGGTGAACGTGGCCCGCGCACAGAACCTCTC
GAGCGTGACGACGGTGAGCACGCAGGACCCATACGTCAAGGCGAAGCTTC
TCGTCGACGGGTACCAGATTTCGGAGGTTAAGAGCGGGACGCACAACAAC
GGCGGCAAGAACCCCGACTGGACCGGAAGAAACAACTTCTTCACCTTCTA
CGTGCCGTCCAACGTGCCGCTGGCCAAACTGGCGGTGGTGCTCGAGGTTT
TCGACTCCAACAGCATGTCTTCCGACAAGATGATCGGCACTTGCGGGAAG
ATCCCGCTCCAGGGGATCGCAGACGGGAAGATGCGGTGGTGGACTGTCAC
CAGCGGGGGCCAGATGCAGGCCTCGGTCTTCTCCGACGTCCAGTTCACCA
ACAGGACTACCAGCAACGGCCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAACAGACGAGCGCCAAGAATGACAAGGACAAGTCGAAGAAAAAGAA
GAAAAAGAAGCATCGTCGTCCGCACGCCGCCGGCACCGCCGGGAGCGGGA
ACCAGAACGGTCTCCGAAACGAGTACAACAGGTACGTGAGCGGCATGAAC
AGCGCCGGCCGGAACAGCGAGGTGCTATCATTCCAAGCCTGGGCCGGCGG
GAGGCACCGGGATGGCAGGAGCAGTGGCAGCAGCCGCGGCAGTGACAGTA
GCAGTAGCAGCAGCAGCAGCAGTGACAGCGACGGCGACTACGGCCGTGGG
CACCACCGCAAGCACGGGTACGGCGACCACGGGGGTGCCACCGGCTACGC
TGTCCCCGGCGGGGCCACGTCCGGCGACTTTCCTCCTGCGGGCTACGCCC
ACGGTTACCCCACAGCCCCGGGAGCCGCCGGAGCTGACTTCCAGTCGCCC
CAGTATCGCCCCCCGGCAACGGCACCTTCTGCGCCCCCGGCCTACCCAGG
CGCCACCAGCTACCCGACTGCCGTTGGTGTGCCGGCGCAGCCACAGGCGC
CGCCGCCGTACCCCGGGGCTCCGCAGCAGCACGGTGGGGTATTCTACAAC
CCTAATTCCAAGCAGTAG back to top
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