mRNA_P-littoralis_Contig117.29.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A6H5KKI6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI6_9PHAE) HSP 1 Score: 437 bits (1123), Expect = 3.070e-151 Identity = 235/336 (69.94%), Postives = 266/336 (79.17%), Query Frame = 3
Query: 21 APIMWQSVQVFAL----LCWHAEAFVI-PCATRATQTASRFVSGTRIFSFRQQRRTPINRGSGRTAVAPLIMSLKEEQEESGESRYLSLTNLTREQFLLGGWAALLGSAYLGANQDQRSYRARKRDLFRSIAGDGKDGKAEFRDILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGGPSSSSRLFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
APIM SV + A LC+ +A+ P +A A R+ S T +R++ VAPL MS KEEQE + E++YLS+T L+REQ L GG AA GSAYLGA+QDQ SYRARKRDLFRSIAG G++ EFRDILEVGVGGNPKVGGF+NL +YRRGQ I+GVDP LSGEPS+ALERAT +AQ+LGLTLRG+GG AEELPFE+GSFDAVVSTLVFCSVRDP AALREVSRVLRPGGKFLFVEHVHAP+EGLSILGLRQQQ+LLDPLQQ LADGCHLTRET +LIRDS G S +RLFSRIE IE +R+KSMWPVSEQVFGVVVK
Sbjct: 4 APIMCLSVNIVAAFTWWLCFEVDAYAFCPTTAKAQARAGRYTSCTSSSLYRRREEY----------VAPLDMSSKEEQERASENKYLSVTKLSREQVLFGGLAACFGSAYLGASQDQTSYRARKRDLFRSIAGGGEN---EFRDILEVGVGGNPKVGGFNNLEFYRRGQRIIGVDPTLSGEPSQALERATEKAQKLGLTLRGVGGIAEELPFETGSFDAVVSTLVFCSVRDPAAALREVSRVLRPGGKFLFVEHVHAPDEGLSILGLRQQQELLDPLQQLLADGCHLTRETDQLIRDSAGESPSRNRLFSRIETIESVRIKSMWPVSEQVFGVVVK 326
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: D7FYW0_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW0_ECTSI) HSP 1 Score: 258 bits (660), Expect = 2.280e-82 Identity = 130/152 (85.53%), Postives = 139/152 (91.45%), Query Frame = 3
Query: 558 ALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGGPSSSSRLFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
ALERAT +AQ+LGLTLRG+GG EELPFES SFDAVVSTLVFCSVRDP AALREVSRVLRPGGKFLFVEHVHAP+EGLSILGLRQQQ+LLDPLQQ LADGCHLTRETG+LIRDS G S +RLFSRIE IE +R+KSMWPVSEQVFGVVVK
Sbjct: 83 ALERATEKAQKLGLTLRGVGGIVEELPFESSSFDAVVSTLVFCSVRDPAAALREVSRVLRPGGKFLFVEHVHAPDEGLSILGLRQQQELLDPLQQLLADGCHLTRETGQLIRDSAGESPSRNRLFSRIETIESVRIKSMWPVSEQVFGVVVK 234
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A835Z8C0_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C0_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.560e-56 Identity = 114/270 (42.22%), Postives = 149/270 (55.19%), Query Frame = 3
Query: 303 GGWAALLGSAYLGANQDQRSYRARKRDLFRSIAGDGKDGKAEFRDILEV---------------GVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATS-------------RAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDST-----GGPSSSSRLFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
G A G + ++D Y ARKR LF++++ D +G + + V G+GGNP +GGF+NL YY RG + GVDPAL + + RA +A +LG+ L +GG AE+LP + S DAVVSTLVFCSV+DP A+ EV+RVLRPGGK+LF+EHV AP +G + R LLDPLQ +A GCHLTR T LI T + +LFSR+E +E V S WP S Q+ GV VK
Sbjct: 14 GSTLAAWGLVFAATSRDDVEYDARKRRLFQALSADQIEGGLHVLEAIAVKDNRMQLSITHNARIGIGGNPTLGGFTNLEYYPRGTVLSGVDPALEDGAAGGIVRAAQCASAALAVTDAAVKAARLGIDLTAVGGRAEQLPIATASCDAVVSTLVFCSVQDPAQAMSEVARVLRPGGKWLFMEHVAAPRDGPLLASQR----LLDPLQIAIASGCHLTRHTEELILSRTQXXXXXXXXRAPQLFSRVEGLERFTVGSRWPASTQIMGVAVK 279
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A4D9CZT3_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZT3_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.520e-46 Identity = 110/268 (41.04%), Postives = 151/268 (56.34%), Query Frame = 3
Query: 246 SGESRYLSLTNLTREQFLLGGWAALLGSAYLGANQ---DQRSYRARKRDLFRSIAGDGKDGKAEFRDI-----LEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGGPSSSSR----LFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
SGE+ ++ L+R + L AL GS L N+ ++R+Y ++LF ++ G +D+ LE+GVG N+ YY G +VG+DP L+ +A+ A S+A+ + + G AE LPF SFDAVVSTLVFCSV+D AL EV+RVLRPGGKFLFVEH+ A E+ +L + Q ++DPLQ L +GCHL R T L+ T G R LF R+ER+ L + + WPVS QV GV+VK
Sbjct: 48 SGEA----VSRLSRRESFLPALIAL-GSGALLLNKSLNEERAYEGLHQELFALLSASGSGAGEAGKDVRALKVLEIGVGQGV------NVKYYPSGCEVVGLDPNLN---QDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVL--HRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGDGRDREGVMLFDRVERLNYLEMDTQWPVSVQVAGVLVK 299
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: W7TRI3_9STRA (S-adenosylmethionine-dependent methyltransferase domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI3_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.140e-45 Identity = 109/257 (42.41%), Postives = 145/257 (56.42%), Query Frame = 3
Query: 285 REQFL-----LGGWAALLGSAYLGANQDQRSYRARKRDLFR----SIAGDGKDGK-AEFRDILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGGPSSSSR----LFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
RE FL LG A LL + ++R+Y ++LF S +G G+ G+ +LE+GVG N+ YY G +VG+DP L+ +A+ A S+A+ + + G AE LPF SFDAVVSTLVFCSV+D AL EV+RVLRPGGKFLFVEH+ A E+ +L + Q ++DPLQ L +GCHL R T L+ T G R LF R+ER+ L + + WPVS QV GV+VK
Sbjct: 154 RESFLPALIALGSGALLLNKSL----NEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGV------NVKYYPSGCEVVGLDPNLN---QDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVL--HRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A7S1WP52_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WP52_ALECA) HSP 1 Score: 152 bits (383), Expect = 1.990e-41 Identity = 92/186 (49.46%), Postives = 114/186 (61.29%), Query Frame = 3
Query: 438 ILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDST-GGPSSSSRLFSRIERIEELRVKSMWPVSEQ 992
+LEVG+ G P NL +Y G + G+D +L G + R RA++LGL + + G+A +LPFE GSFDAVV T V CSV DP ALREVSRVL PGG+F +VEHV A + G L QQ L+DPLQQ LA CHL R+T LIR S G + S LFSR E + V MWP+S+Q
Sbjct: 9 VLEVGIAGAP------NLEFYPSGTQLTGLDSSLPGGDQQRDTR--ERARELGLDISWVMGDASQLPFEDGSFDAVVMTKVLCSVADPEVALREVSRVLAPGGRFGYVEHV-AADPGSP---LETQQLLVDPLQQALAGNCHLHRDTDGLIRRSLRGSAAGSGGLFSREEAGQRYEVWEMWPISQQ 182
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A7S3YFG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFG5_HETAK) HSP 1 Score: 154 bits (390), Expect = 8.290e-41 Identity = 105/296 (35.47%), Postives = 162/296 (54.73%), Query Frame = 3
Query: 195 RTAVAPLIMSLKEEQEESGESRYLSLTNLTREQFLLGG---WAALLGSA--YLGANQDQRSYRARKRDLFRSIAGDGKDGKAEFRDILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIR------------DSTGGPSSSSRL------FSRIERIEELRVKSMWPVSEQVFGVVVK 1013
R V L M++ ++ GES+ SL +LTR+ + G + LL SA +L D +++F +I+G +F D+LE+GVG N+ YY++G + G+DP L + S ++ ++ + + + AE LP+E SFDAVV TLV C++ DP A E+ RVLRPGGK+LFVEHV A +G S L++QQ++LDPLQQ L +GCHL R+T ++ D+ G PSS F+++E+ E+ + S WP++ Q+ GV+V+
Sbjct: 49 RVGVRELCMNVGDD----GESQTGSLLSLTRKDAIALGLSLFPGLLVSANIFLSVKSDNYLDENIHKEIFGAISGQ------DFIDVLEIGVGTAV------NMKYYQKGTKLFGIDPYL--DESSLVKAKSTWIGKNNIDFQYAKASAETLPYEDCSFDAVVGTLVMCTIPDPQKAFEEIYRVLRPGGKYLFVEHVLA--DGPSHQALKKQQEVLDPLQQILVNGCHLARKTENILLVDCSQDKKGDGDDAQGEPSSGDPRRRAHYPFTKLEQYHEVYLDSRWPINRQISGVLVR 324
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A7S2IAZ8_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IAZ8_9DINO) HSP 1 Score: 154 bits (390), Expect = 1.100e-40 Identity = 91/193 (47.15%), Postives = 122/193 (63.21%), Query Frame = 3
Query: 438 ILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTG-GPSSSSRLFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
+LE+G+ G P NL YY G +VG+D L G P + ++ A++ G+ + + G+AE+LPF+ SFDAVV T V CSV DP A LREVSRVL PGG+F +VEHV A + G + L QQ +DPLQQ LA CHL R+T RLI S G ++++ LFSR E +E +V MWP+++Q GVV K
Sbjct: 156 VLEIGIAGAP------NLEYYPSGTRLVGLDGNLPG-PGDQID-IRKHAKEFGVDISWVRGDAEKLPFKDRSFDAVVMTKVLCSVIDPEAVLREVSRVLVPGGRFGYVEHV-AADPGSA---LEAQQLFVDPLQQALAGNCHLHRDTDRLIHRSIGTSDATTAGLFSREESVERYQVWEMWPIAQQAAGVVTK 336
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A7S1XQV9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQV9_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.780e-40 Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 3
Query: 300 LGGWAALLGSAYLGANQDQRSYRARKRDLF-RSIAGDGKDGKAEFRDILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEALER-ATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGGPSSSSRLFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
+GG+A+ +G + + +Y KR+LF R + D +LEVG+G + G + L YY +G + G++P L + + A+ R AT+R +L LT RG G E+LPF GSFDAVV++LV CS +DP A + E RVLR GG+F+FVEH+HA E+ + R QQ LDPLQQ+LADGCHL RE L +D+ + R RIE + + V S WP + Q+ G + K
Sbjct: 36 IGGYASGVGLWAARVARAESAYSDAKRELFGRYLRPDDA--------VLEVGIG----LEG-ATLDYYPKGCRVTGLEPRLRDDNAAAMRRRATARDLRLELT-RGCG---EDLPFPPGSFDAVVTSLVLCSAKDPKAVVEEAHRVLRRGGRFVFVEHIHALEDAAFM---RWQQATLDPLQQRLADGCHLQRENDALFKDA------AERGLFRIEELRYVDVPSRWPCNVQMMGCMAK 249
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Match: A0A7S0N8D1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8D1_9CHLO) HSP 1 Score: 144 bits (364), Expect = 7.970e-37 Identity = 98/243 (40.33%), Postives = 133/243 (54.73%), Query Frame = 3
Query: 312 AALLGSAYLGANQDQRSYRARKRDLFRSIAGDGKDGKAEFRDILEVGVGGNPKVGGFSNLGYYRRGQNIVGVDPALSGEPSEAL-ERATSRAQQLGLTLRGMGGEAEELPFESGSFDAVVSTLVFCSVRDPVAALREVSRVLRPGGKFLFVEHVHAPEEGLSILGLRQQQDLLDPLQQQLADGCHLTRETGRLIRDSTGG--PSSSSR------LFSRIERIEELRVKSMWPVSEQVFGVVVK 1013
A + S G + + + RK+ LF ++ A +D+LE+G+G P NL YYR G +VGV EP+E + E A +A+ LGL+L G E LP E S D VV TLV C+V DP L EV+RVLRPGG++LF++HV A + G ++L QQ LLD LQQ +A GCHLTR+TG LI +T PSS+ LF + IE V +W ++ V GV +
Sbjct: 121 AVIAASMESGMDTYEANIEQRKQALFATL-------DAGAKDVLELGIGTGP------NLKYYRPGTRVVGV------EPNEYMDEYAREKAEALGLSLELRRGVGEALPLEDASVDVVVGTLVMCTVADPARVLAEVARVLRPGGQYLFIDHV-AADPGTTLLF---QQRLLDGLQQFVAGGCHLTRKTGELIESATKSAVPSSAKAGTVIAPLFDDVT-IERFMVDDIWVIAPHVAGVATR 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.29.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig117.29.2 >prot_P-littoralis_Contig117.29.2 ID=prot_P-littoralis_Contig117.29.2|Name=mRNA_P-littoralis_Contig117.29.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bp MWQSVQVFALLCWHAEAFVIPCATRATQTASRFVSGTRIFSFRQQRRTPIback to top mRNA from alignment at P-littoralis_Contig117:81175..85090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig117.29.2 ID=mRNA_P-littoralis_Contig117.29.2|Name=mRNA_P-littoralis_Contig117.29.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3916bp|location=Sequence derived from alignment at P-littoralis_Contig117:81175..85090- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig117:81175..85090- >mRNA_P-littoralis_Contig117.29.2 ID=mRNA_P-littoralis_Contig117.29.2|Name=mRNA_P-littoralis_Contig117.29.2|organism=Pylaiella littoralis U1_48|type=CDS|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig117:81175..85090- (Pylaiella littoralis U1_48)back to top |