prot_P-littoralis_Contig666.31.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig666.31.1
Unique Nameprot_P-littoralis_Contig666.31.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length501
Homology
BLAST of mRNA_P-littoralis_Contig666.31.1 vs. uniprot
Match: D8LBS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS2_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 8.910e-57
Identity = 200/515 (38.83%), Postives = 229/515 (44.47%), Query Frame = 0
Query:    1 NKARRSKWAALAIEVGNSRGLCTLAEAAQRFCGEPASVASTSTSTANGEAGEVETEETAAEAARGECAGSPREALNSSAPRRSSSSGQGVGTAAGKAAGLFASGCKAGEAGAHPMQKTNGAVLEGLAWSLVGRGSSEGAAAMARAERVLENMLHDE-RSPSVAVAAAGGGLKQSASVGNLPPSVQASEAVGLTVPAGSEDRSQLQTLQLGVLCSQGSVVRGGLGMGAGFCTGTAAKGLVPEKGAAAAAXXXXXXXXXXXXXXXVRAANAGLAEAGSLAKKQLAYAAQASCYYLQLSLGHAHAGAI--DLMTGKPAEAEARFKRQLEEARKAGDVILEALAERNLADTREVDDDLKGALVHLRRCRSLAGRGRNAALEADVCRRLSSVYAEIAAXXXXXXXXXXXXXXXXXXXDXGIGQEGGTAQQAREGGEESPETEKEDGADLSEDLSDTVVPETEVLLNEE-----------LEDNDFEFLKATAGDRARLFAERYETAVFGLEWPVYGGGAG 501
            +KA+RSKW ALA+EV NSRGLC LAEAAQRF GE                                                                                                        AAAM RAER LE  L  E R PSVA AAA    + +++V ++    +A EAVG++VPAGSE+  Q+  LQLGVL +QG V RGGLGMGA F T                 XXXXXXXXXXXXXXX                                            DLMTG+P +A  RF+ QL+EA+ AGD ILEALAERNLADTREVD+DL GAL HLRRCR+LA R RN+ALEAD CRRLSSVYAEIA                        GQ G                E+E G D  +          E   ++             ED+D EFLK+TA DRARLFAERYETAVFGLEWPV  G  G
Sbjct:   13 DKAKRSKWTALAMEVANSRGLCLLAEAAQRFSGE--------------------------------------------------------------------------------------------------------AAAMKRAERGLEKFLDREHRRPSVAAAAASVAKRSASTVDDVSLLARAPEAVGVSVPAGSENSDQITALQLGVLGNQGLVARGGLGMGAAFSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMTGRPVQAAERFELQLKEAQNAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIA------------------------GQSGXXXXXXXXXXXXXXSPEREKGGDHGDGXXXXXXXTQERNRSDSGXXXXXXXXXXREDSDVEFLKSTAADRARLFAERYETAVFGLEWPVSSGNGG 399          
BLAST of mRNA_P-littoralis_Contig666.31.1 vs. uniprot
Match: A0A6H5KC12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC12_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 5.460e-51
Identity = 145/300 (48.33%), Postives = 169/300 (56.33%), Query Frame = 0
Query:   13 IEVGNSRGLCTLAEAAQRFCGEPASVASTSTSTANGEAGEVETEETAAEAARGECAGSPREALNSSAPRRSSS---SGQGVGTAAGKAAGLFASGCKAGEAGAHPMQKTNGAVLEGLAWSLVGRGSSEGA-------------------AAMARAERVLENMLHDE-RSPSVAVAAAGGGLKQSASVGNLPPSVQASEAVGLTVPAGSEDRSQLQTLQLGVLCSQGSVVRGGLGMGAGFCTGTAAKGLVPEKG-AAAAAXXXXXXXXXXXXXXXVRAANAGLAEAGSLAKKQLAYAAQAS 288
            +EV NSRGLC LAEAAQRF GE    A+T        +              GE AGS  +    +  RR SS     Q   TAA KAAGL A+GCKAG+ GAHP QK NGA+LEGLAWSL G+GS+EGA                   AAM RAER LE  L  E R PSVA +AAG   + ++S  ++P S +A EAVG++VPAGSE+  Q+  LQLGVL +QG V RGG GMGA F T   A G V  K  AA                   +AANAG AEAGSLAKKQL YA +AS
Sbjct:    1 MEVANSRGLCLLAEAAQRFSGESRE-ATTGREDNKPSSDXXXXXXXXVGTTPGERAGSVSQTAPEAGGRRRSSMTQDEQATRTAAEKAAGLIAAGCKAGDLGAHPTQKMNGAMLEGLAWSLAGQGSAEGASLLFRGFVVGRRGEIGERAAAMKRAERGLEKFLDSEHRRPSVAASAAGVAKRSASSADDVPLSARAQEAVGVSVPAGSENSDQITALQLGVLGTQGLVARGGFGMGAAFSTSAVAMGSVSAKARAAVVGDAAGALAVVAAARTAAKAANAGWAEAGSLAKKQLTYATKAS 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBS2_ECTSI8.910e-5738.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC12_9PHAE5.460e-5148.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 293..396
e-value: 3.5E-6
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig666contigP-littoralis_Contig666:88738..93157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig666.31.1mRNA_P-littoralis_Contig666.31.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig666 88738..93157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig666.31.1 ID=prot_P-littoralis_Contig666.31.1|Name=mRNA_P-littoralis_Contig666.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=501bp
NKARRSKWAALAIEVGNSRGLCTLAEAAQRFCGEPASVASTSTSTANGEA
GEVETEETAAEAARGECAGSPREALNSSAPRRSSSSGQGVGTAAGKAAGL
FASGCKAGEAGAHPMQKTNGAVLEGLAWSLVGRGSSEGAAAMARAERVLE
NMLHDERSPSVAVAAAGGGLKQSASVGNLPPSVQASEAVGLTVPAGSEDR
SQLQTLQLGVLCSQGSVVRGGLGMGAGFCTGTAAKGLVPEKGAAAAAGAA
GALAAVAGARNAVRAANAGLAEAGSLAKKQLAYAAQASCYYLQLSLGHAH
AGAIDLMTGKPAEAEARFKRQLEEARKAGDVILEALAERNLADTREVDDD
LKGALVHLRRCRSLAGRGRNAALEADVCRRLSSVYAEIAAAAVAAAGSPP
SSDGGGGGGDGGIGQEGGTAQQAREGGEESPETEKEDGADLSEDLSDTVV
PETEVLLNEELEDNDFEFLKATAGDRARLFAERYETAVFGLEWPVYGGGA
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf