mRNA_P-littoralis_Contig666.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: Q8QNA9_ESV1K (EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K) HSP 1 Score: 410 bits (1054), Expect = 1.670e-130 Identity = 270/690 (39.13%), Postives = 386/690 (55.94%), Query Frame = 1
Query: 34 TRRSGVEQEIRGGDTSNDTRVRTSIIPTALSTLLCNNPGKKKPITRTLDCLARYGGTYRYLTGIFGAHVLLRLLERG-ETVKVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDV-FRLLSPASKYALKQKIYKCVIDKNFMGELEGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN-CSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
TR+SGVEQ + + R S I L L + K I L+ ++RY G++RY+ G+F +V++R LE+G + +V VFYDRCWA+++ G + N +S L EF+ +G D SLFPP + SRL++ +TR+ME SA N + +H A+I + FRL ND + F+ L + + + +++ G+L+ H+ ++R+ L Q S D + LKK P +F +++ IS VAE+ S+ + + E + + E RK Y +R++R L R K ++ P+WKL PCF YSS+ + + F EG + V+ F++ FD+ V RKGYK SGFRSDG+QV ++F+ L + KP+ T L +GY A+KVVS +Q G+F +S+ R D++K+ D TV+DPGC VVSVR+ LE + +ST + T+Y+A SG + GRE KRRS Y + KTA S + Y + A F+ M+ EK R+R+RF +SRL+Q T+DKLA S PS N+V FGNGSF+A +G A PRKKLVRA+ R V MLDEFRTSKMCPGGCG M DV +GG R+R+C+ VS GV EN C L+ F +RD SAT+N C A CG R
Sbjct: 17 TRKSGVEQSLHAEGDEESSSTRRSCICLDLERTLVKSVIPKY-IRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINTRISGKNTRNDFSDLLDEFIDQTGFDTSLFPPRVPSRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIISLSNDCLEREMRGDLDPGYVPHVL---QVRDLLAQVYSTEPDVSVLKVLKKKPHLFLELISMISNVAEEASDNNRDLREETKTRSDEEKVRKAFYMSERIKRGLV--DRPKMCTVLPVWKLAPCFPYYSSSVVGSTFHKEGHDFSSVSRFISEHFDLGRVNRKGYKPSGFRSDGYQVQVTFMTLVSKKPLVPGTKDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRLHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSAKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFVAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLA-----SSMAACPSDRKNIVLFGNGSFRAKKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDV--QGGQRVRQCTTVS-VGV----ENPCPLFENAVAFRYDRDASATLNF---CLAGYCGLVR 682
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE) HSP 1 Score: 375 bits (964), Expect = 9.570e-112 Identity = 244/615 (39.67%), Postives = 346/615 (56.26%), Query Frame = 1
Query: 247 RLLERGETVKVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDV-FRLLSPASKYALKQKIYKCVIDKNFMGELEGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSRILA-QSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN-CSLYGEKGPFVCNRDESATVNMTKCCHASLCG 2055
R+L+ + +V VFYDRCWA+++ G + N +S L E + SG D SLFPP + RL++ +TR+ E SA N + +H A+I + FRL ND + F+ L + + + +++ G+L+ H+ ++R+ L Q + D P+ LKK +F +++ IS VAE+ S+ + + E + + E RK Y +R++R L R K ++ P+WKL PCF YSS+ + + F EG + V+ F++ FD+ V RKGYK SGFRSDG+QV ++F+AL + KP T L +GY A+KVVS +Q G+F +S+ R D++K+ D TV+DPGC VVSVR+ LE R + +ST + T+Y+ SG + GRE KRRS Y + KTA S L Y + A F+ M+ EK R+R+RF +SRL+Q T+DKLA+ I PS N+V FGNGSF+AM+G A PRKKLVRA+ R V MLDEFRTSKMCPGGCG M DV +GG R+R+C+ V GV EN C L+ F C+RD SAT+N C A CG
Sbjct: 715 RVLQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEIIDQSGFDTSLFPPKVPCRLQETVTREKEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMRGDLDPGYVPHVL---QVRDPLAQVYATEPDVPVLKILKKKTHLFVELISMISNVAEEASDNNRALREETKTRSDEEKVRKAFYMSERIKRGLV--DRPKTCTVLPVWKLAPCFPHYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRVHANNLTVVDPGCASVVSVRSCPLEFCRCCRERSRESTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDV--QGGQRVRQCTTVC-VGV----ENPCPLFENGVAFRCDRDASATLNF---CLAGYCG 1306
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 358 bits (918), Expect = 1.830e-104 Identity = 224/551 (40.65%), Postives = 316/551 (57.35%), Query Frame = 1
Query: 274 KVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDVFRLLSPASKYALKQKIYKCVIDKNFMGEL-EGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGE 1893
+V VFYDRCWA+++ G + N +S L EF+ SG D SLFPP + RL++ +TR+ME SA N + +H A+I + FRL ND + PA + ++ + + E+ E LD ++ + ++R+ L Q S D P+ LKK P +F +++ ISRVAE+ S+ + + E + + E RK Y +R++R L R K ++ P+WKL PCF YSS+ + + F EG + V+ F++ FD+ V RKGYK SGFRSDG+QV ++F+AL + KP T L +GY A+KVVS +Q G+F +S+ R D++K+ D TV+DPGC VVSVR+ LE + +ST + T+Y+ SG + GRE KRRS Y + KTA S L Y + A F+ M+ EK R+R+RF +SRL+Q T+DKLA+ I PS N+V FGNGSF+AM+G A PRKKLVRA+ R V MLDEFRTSKMCPGGCG M DV+G+
Sbjct: 936 EVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFPPKVPCRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHFPAKD---RSRVIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSTEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREETKTRSDEEKVRKAFYISERIKRGLV--DRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRVHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGD 1473
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5KSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF5_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.260e-40 Identity = 101/236 (42.80%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 1255 KKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN 1959
+K+ D TV+ PGC VVSVR+ LE + +ST + T+Y+ SG + GRE KRRS Y + KTA S L Y + A+ F+ M+ EK R+R+RF +SRL+Q T+DKLA+ I PS N+V FGNGSF+AM+G A PRKKLVRA+ R V MLDEFRTSKMCPGGCG M DV+G +C + + VA E+
Sbjct: 139 RKIVADRVYAYNLTVVGPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAKTFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGYASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGIDSVGEQCREIVTSVVAFCTEH 369
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54) HSP 1 Score: 90.1 bits (222), Expect = 5.770e-15 Identity = 94/331 (28.40%), Postives = 150/331 (45.32%), Query Frame = 1
Query: 1072 FRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYD-FPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSR---------ILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPG--YREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
F +DG Q+ L L + + + + +L + GY+ P+ ++ S + GV+ +S K + E V + DPG V++V S T+R IL STC + DY TL R E + R G Y A+ + +T+ L + + Y + + ++RE GR+ RF R Q T+ +A++ + + T V+ FG SF+A +G A PRK L+R +A R V M++E+ TSKMCPG CG ED + R+R C N + E+C L+ F +RD+ + N+
Sbjct: 440 FLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSL---LKSTSIREDVVVMSA--DPGQAKVINVS------SATARTWAKQDPGVILKTSTC--VFGDDYRR--DTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIADKYMGHVED-----TCRVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVNEYNTSKMCPG-CG---EDTVEDKERRIRSCKNFK---IGSPEESCRLHRLTPEFEMDRDDVGSTNI 743
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC) HSP 1 Score: 89.0 bits (219), Expect = 1.340e-14 Identity = 100/382 (26.18%), Postives = 163/382 (42.67%), Query Frame = 1
Query: 904 VKPFSLTPMWKLQPCFVQYSSTSLSAAFEGYGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQPG--VFTVSEKRVDAKKVPVDERATVRTTVIDPG---CVDVVSVRTTGLEISTTSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREA---LRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
++PFS K C +T +++ +GY ++S D + + F +DG Q+ L + L + + + + +L + GY A + T + G V+ +S V+++ + R + DPG ++V S + E IL STC + DY + E RR Y A LRDE K +T+ L + + Y + + A+ E GRR RF R Q + ++A+R + V+ FG SF A +G A PRK+L+R +A R V M++E+ TSK CPG +ED + R+R C N V E+C L+ +RD+ + N+
Sbjct: 402 LRPFSREANIK---CLRSRENTRYASSEQGY------LSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISS-LVESESI----RGDLVVMSADPGQAKVINVCSATSETWEKKDPVAILKTSTC--VFGDDYRRETLASHSDEYETLRRRGTSYGIAIDRLRDEKK---RTSCLTTFIQYCRSWCANSSALMNETLQKGRRFLRFGRHRATQSILARIADRFMGH-----VGDICRVMLFGKASFSAKKGRASAPRKRLIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKE----RRIRSCINFK---VGSPEESCRLHPLTPVLEMDRDDVGSTNI 752
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 4.190e-14 Identity = 96/331 (29.00%), Postives = 149/331 (45.02%), Query Frame = 1
Query: 1072 FRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYD-FPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSR---------ILAQSTCCALSSTDYTATSGTLI*RGR--EAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
F +DG Q+ L + L + + + +L +AGY+ P+ ++ S + GV+ +S +D+ + D V DPG V++V S T+R IL STC + DY TL R E RR Y A+ + +T+ L + + Y K + A+ E R+ RF R Q T+ K+A++ + G P V+ FG SF+A +G A PRK L+R +A R V M++E+ TSK CPG CG ED + R+R C N + E+C L+ F +RD+ + N+
Sbjct: 479 FLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISS-LLDSPSIRED----VVVMSADPGQAKVINVS------SATARTWARQDPGVILNSSTC--VFGDDYRR--DTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAALLLETLQEARKFLRFDRFRATQKTLAKIADKYM--GHVGDPC---RVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVEEYNTSKKCPG-CG---EDTVEDKERRIRSCKNFK---IGSPEESCRLHPLTPEFEMDRDDVGSTNI 782
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.450e-9 Identity = 57/159 (35.85%), Postives = 82/159 (51.57%), Query Frame = 1
Query: 1450 EAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTK-WVARHFEAMY-REKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCS 1920
EA RSR Y +AL+ K R K++ L ++ Y + W R E++Y E R+ RF R +Q + + +I T ++ FGNGSFKA +G VPRK++VRALA+ V M DE+ +SK P CG + ++ G R R CS
Sbjct: 566 EAVMRSRTPYGQALKTLWKYRKKSSRLQDIIAYCRTW--RSVESLYWAEILKKVRKVRRFERFRNIQTQVQNIRKKI-----TTHLQGRRGLLVFGNGSFKAKKGHISVPRKQIVRALAIECAVVMGDEYGSSKYSPL-CGHELVNLDNGEGRRTRVCS 716
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.480e-9 Identity = 72/230 (31.30%), Postives = 100/230 (43.48%), Query Frame = 1
Query: 1456 KRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGK-------------------TKFPS-------TTSNVVFFGNGSF-KAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
+RR GY +A+ +T YT + HF M EK + RRR F R I ++A +I T+ T + VVFFGN F RG P+PRK L+RA+A+ V ++DEFRTSK C G CG + V G R+ RC + + G L +CS+ F+ +RD +A+VN+ C L GR R
Sbjct: 554 RRRDNTGYSDAISQLSSVSMRTPG--GAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRKIGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRG--PLPRKALIRAIALLVPVVLMDEFRTSKACCG-CGKNLVQVNGS---RVFRCISCTPEGDNL---DCSVR-----FI-DRDINASVNIAICGINMLLGRTR 766
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.000e-8 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 1705 TTSNVVFFGNGSF-KAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
T + VVFFGN F RG P+PRK L+RA+A+ V ++DEFRTSK C G CG + V G R+ RC + + G L +CS+ F+ +RD +A+VN+ C L G AR
Sbjct: 656 TWTRVVFFGNALFGHGSRG--PLPRKALIRAIALLVPVVLMDEFRTSKACCG-CGKNLVQVNGS---RVFRCISCTPEGDNL---DCSVR-----FI-DRDVNASVNIAICGINMLLGMAR 761 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig666.9.1 >prot_P-littoralis_Contig666.9.1 ID=prot_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp MVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLback to top mRNA from alignment at P-littoralis_Contig666:15496..17559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig666.9.1 ID=mRNA_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2064bp|location=Sequence derived from alignment at P-littoralis_Contig666:15496..17559- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig666:15496..17559- >mRNA_P-littoralis_Contig666.9.1 ID=mRNA_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1158bp|location=Sequence derived from alignment at P-littoralis_Contig666:15496..17559- (Pylaiella littoralis U1_48)back to top |