mRNA_P-littoralis_Contig666.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig666.9.1
Unique NamemRNA_P-littoralis_Contig666.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: Q8QNA9_ESV1K (EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K)

HSP 1 Score: 410 bits (1054), Expect = 1.670e-130
Identity = 270/690 (39.13%), Postives = 386/690 (55.94%), Query Frame = 1
Query:   34 TRRSGVEQEIRGGDTSNDTRVRTSIIPTALSTLLCNNPGKKKPITRTLDCLARYGGTYRYLTGIFGAHVLLRLLERG-ETVKVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDV-FRLLSPASKYALKQKIYKCVIDKNFMGELEGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN-CSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
            TR+SGVEQ +        +  R S I   L   L  +   K  I   L+ ++RY G++RY+ G+F  +V++R LE+G +  +V  VFYDRCWA+++    G +  N +S L  EF+  +G D SLFPP + SRL++ +TR+ME SA N + +H  A+I   + FRL ND  + F+ L    +  +   +    +++   G+L+     H+    ++R+ L Q  S   D  +   LKK P +F  +++ IS VAE+ S+ +  + E  + +   E  RK  Y  +R++R L    R K  ++ P+WKL PCF  YSS+ + + F  EG  +  V+ F++  FD+  V RKGYK SGFRSDG+QV ++F+ L + KP+   T  L  +GY     A+KVVS  +Q  G+F +S+ R D++K+  D       TV+DPGC  VVSVR+  LE       +  +ST   +  T+Y+A SG  +  GRE KRRS   Y          + KTA   S + Y +  A  F+ M+ EK    R+R+RF +SRL+Q T+DKLA     S     PS   N+V FGNGSF+A +G A  PRKKLVRA+  R  V MLDEFRTSKMCPGGCG  M DV  +GG R+R+C+ VS  GV    EN C L+     F  +RD SAT+N    C A  CG  R
Sbjct:   17 TRKSGVEQSLHAEGDEESSSTRRSCICLDLERTLVKSVIPKY-IRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINTRISGKNTRNDFSDLLDEFIDQTGFDTSLFPPRVPSRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIISLSNDCLEREMRGDLDPGYVPHVL---QVRDLLAQVYSTEPDVSVLKVLKKKPHLFLELISMISNVAEEASDNNRDLREETKTRSDEEKVRKAFYMSERIKRGLV--DRPKMCTVLPVWKLAPCFPYYSSSVVGSTFHKEGHDFSSVSRFISEHFDLGRVNRKGYKPSGFRSDGYQVQVTFMTLVSKKPLVPGTKDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRLHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSAKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFVAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLA-----SSMAACPSDRKNIVLFGNGSFRAKKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDV--QGGQRVRQCTTVS-VGV----ENPCPLFENAVAFRYDRDASATLNF---CLAGYCGLVR 682          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 9.570e-112
Identity = 244/615 (39.67%), Postives = 346/615 (56.26%), Query Frame = 1
Query:  247 RLLERGETVKVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDV-FRLLSPASKYALKQKIYKCVIDKNFMGELEGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSRILA-QSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN-CSLYGEKGPFVCNRDESATVNMTKCCHASLCG 2055
            R+L+  +  +V  VFYDRCWA+++    G +  N +S L  E +  SG D SLFPP +  RL++ +TR+ E SA N + +H  A+I   + FRL ND  + F+ L    +  +   +    +++   G+L+     H+    ++R+ L Q  +   D P+   LKK   +F  +++ IS VAE+ S+ +  + E  + +   E  RK  Y  +R++R L    R K  ++ P+WKL PCF  YSS+ + + F  EG  +  V+ F++  FD+  V RKGYK SGFRSDG+QV ++F+AL + KP    T  L  +GY     A+KVVS  +Q  G+F +S+ R D++K+  D       TV+DPGC  VVSVR+  LE     R  + +ST   +  T+Y+  SG  +  GRE KRRS   Y          + KTA   S L Y +  A  F+ M+ EK    R+R+RF +SRL+Q T+DKLA+ I        PS   N+V FGNGSF+AM+G A  PRKKLVRA+  R  V MLDEFRTSKMCPGGCG  M DV  +GG R+R+C+ V   GV    EN C L+     F C+RD SAT+N    C A  CG
Sbjct:  715 RVLQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEIIDQSGFDTSLFPPKVPCRLQETVTREKEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMRGDLDPGYVPHVL---QVRDPLAQVYATEPDVPVLKILKKKTHLFVELISMISNVAEEASDNNRALREETKTRSDEEKVRKAFYMSERIKRGLV--DRPKTCTVLPVWKLAPCFPHYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRVHANNLTVVDPGCASVVSVRSCPLEFCRCCRERSRESTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDV--QGGQRVRQCTTVC-VGV----ENPCPLFENGVAFRCDRDASATLNF---CLAGYCG 1306          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 1.830e-104
Identity = 224/551 (40.65%), Postives = 316/551 (57.35%), Query Frame = 1
Query:  274 KVDMVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRLRQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDVFRLLSPASKYALKQKIYKCVIDKNFMGEL-EGLDFVHLQVIDELRNELRQPLSQXXDKPLAYDLKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSE--RKGLY--KRMERDLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAF--EG--YGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGE 1893
            +V  VFYDRCWA+++    G +  N +S L  EF+  SG D SLFPP +  RL++ +TR+ME SA N + +H  A+I   + FRL ND  +     PA     + ++   + +     E+ E LD  ++  + ++R+ L Q  S   D P+   LKK P +F  +++ ISRVAE+ S+ +  + E  + +   E  RK  Y  +R++R L    R K  ++ P+WKL PCF  YSS+ + + F  EG  +  V+ F++  FD+  V RKGYK SGFRSDG+QV ++F+AL + KP    T  L  +GY     A+KVVS  +Q  G+F +S+ R D++K+  D       TV+DPGC  VVSVR+  LE       +  +ST   +  T+Y+  SG  +  GRE KRRS   Y          + KTA   S L Y +  A  F+ M+ EK    R+R+RF +SRL+Q T+DKLA+ I        PS   N+V FGNGSF+AM+G A  PRKKLVRA+  R  V MLDEFRTSKMCPGGCG  M DV+G+
Sbjct:  936 EVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFPPKVPCRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHFPAKD---RSRVIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSTEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREETKTRSDEEKVRKAFYISERIKRGLV--DRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQI---AKKVVSLETQERGLFVLSQARKDSRKIVADRVHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGD 1473          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5KSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF5_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.260e-40
Identity = 101/236 (42.80%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 1255 KKVPVDERATVRTTVIDPGCVDVVSVRTTGLEIST-TSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPEN 1959
            +K+  D       TV+ PGC  VVSVR+  LE       +  +ST   +  T+Y+  SG  +  GRE KRRS   Y          + KTA   S L Y +  A+ F+ M+ EK    R+R+RF +SRL+Q T+DKLA+ I        PS   N+V FGNGSF+AM+G A  PRKKLVRA+  R  V MLDEFRTSKMCPGGCG  M DV+G       +C  +  + VA   E+
Sbjct:  139 RKIVADRVYAYNLTVVGPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAKTFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAAC-----PSDRKNIVLFGNGSFRAMKGYASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGIDSVGEQCREIVTSVVAFCTEH 369          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 90.1 bits (222), Expect = 5.770e-15
Identity = 94/331 (28.40%), Postives = 150/331 (45.32%), Query Frame = 1
Query: 1072 FRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYD-FPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSR---------ILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPG--YREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
            F +DG Q+ L    L + +   + + +L + GY+  P+   ++ S   +  GV+ +S      K   + E   V +   DPG   V++V       S T+R         IL  STC  +   DY     TL  R  E +   R G  Y  A+      + +T+ L + + Y +    +   ++RE    GR+  RF   R  Q T+  +A++ +   +      T  V+ FG  SF+A +G A  PRK L+R +A R  V M++E+ TSKMCPG CG   ED   +   R+R C N     +    E+C L+     F  +RD+  + N+
Sbjct:  440 FLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSL---LKSTSIREDVVVMSA--DPGQAKVINVS------SATARTWAKQDPGVILKTSTC--VFGDDYRR--DTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIADKYMGHVED-----TCRVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVNEYNTSKMCPG-CG---EDTVEDKERRIRSCKNFK---IGSPEESCRLHRLTPEFEMDRDDVGSTNI 743          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 89.0 bits (219), Expect = 1.340e-14
Identity = 100/382 (26.18%), Postives = 163/382 (42.67%), Query Frame = 1
Query:  904 VKPFSLTPMWKLQPCFVQYSSTSLSAAFEGYGDVASFVASEFDVSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPKPARKVVSTCSQPG--VFTVSEKRVDAKKVPVDERATVRTTVIDPG---CVDVVSVRTTGLEISTTSRILAQSTCCALSSTDYTATSGTLI*RGREAKRRSRPGYREA---LRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
            ++PFS     K   C     +T  +++ +GY      ++S  D    +   +    F +DG Q+ L  + L + +   + + +L + GY     A   + T  + G  V+ +S   V+++ +    R  +     DPG    ++V S  +   E      IL  STC  +   DY   +        E  RR    Y  A   LRDE K   +T+ L + + Y +    +  A+  E    GRR  RF   R  Q  + ++A+R +             V+ FG  SF A +G A  PRK+L+R +A R  V M++E+ TSK CPG     +ED +     R+R C N     V    E+C L+        +RD+  + N+
Sbjct:  402 LRPFSREANIK---CLRSRENTRYASSEQGY------LSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISS-LVESESI----RGDLVVMSADPGQAKVINVCSATSETWEKKDPVAILKTSTC--VFGDDYRRETLASHSDEYETLRRRGTSYGIAIDRLRDEKK---RTSCLTTFIQYCRSWCANSSALMNETLQKGRRFLRFGRHRATQSILARIADRFMGH-----VGDICRVMLFGKASFSAKKGRASAPRKRLIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKE----RRIRSCINFK---VGSPEESCRLHPLTPVLEMDRDDVGSTNI 752          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.190e-14
Identity = 96/331 (29.00%), Postives = 149/331 (45.02%), Query Frame = 1
Query: 1072 FRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYD-FPKPARKVVSTCSQP-GVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSVRTTGLEISTTSR---------ILAQSTCCALSSTDYTATSGTLI*RGR--EAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNM 2025
            F +DG Q+ L  + L + +     + +L +AGY+  P+   ++ S   +  GV+ +S   +D+  +  D    V     DPG   V++V       S T+R         IL  STC  +   DY     TL  R    E  RR    Y  A+      + +T+ L + + Y K    +  A+  E     R+  RF   R  Q T+ K+A++ +  G    P     V+ FG  SF+A +G A  PRK L+R +A R  V M++E+ TSK CPG CG   ED   +   R+R C N     +    E+C L+     F  +RD+  + N+
Sbjct:  479 FLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISS-LLDSPSIRED----VVVMSADPGQAKVINVS------SATARTWARQDPGVILNSSTC--VFGDDYRR--DTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAALLLETLQEARKFLRFDRFRATQKTLAKIADKYM--GHVGDPC---RVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVEEYNTSKKCPG-CG---EDTVEDKERRIRSCKNFK---IGSPEESCRLHPLTPEFEMDRDDVGSTNI 782          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.450e-9
Identity = 57/159 (35.85%), Postives = 82/159 (51.57%), Query Frame = 1
Query: 1450 EAKRRSRPGYREALRDEDKGRSKTANLDSLLVYTK-WVARHFEAMY-REKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGKTKFPSTTSNVVFFGNGSFKAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCS 1920
            EA  RSR  Y +AL+   K R K++ L  ++ Y + W  R  E++Y  E     R+  RF   R +Q  +  +  +I     T        ++ FGNGSFKA +G   VPRK++VRALA+   V M DE+ +SK  P  CG  + ++    G R R CS
Sbjct:  566 EAVMRSRTPYGQALKTLWKYRKKSSRLQDIIAYCRTW--RSVESLYWAEILKKVRKVRRFERFRNIQTQVQNIRKKI-----TTHLQGRRGLLVFGNGSFKAKKGHISVPRKQIVRALAIECAVVMGDEYGSSKYSPL-CGHELVNLDNGEGRRTRVCS 716          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.480e-9
Identity = 72/230 (31.30%), Postives = 100/230 (43.48%), Query Frame = 1
Query: 1456 KRRSRPGYREALRDEDKGRSKTANLDSLLVYTKWVARHFEAMYREKNTNGRRRTRFITSRLLQGTIDKLANRIVDSGK-------------------TKFPS-------TTSNVVFFGNGSF-KAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
            +RR   GY +A+        +T        YT  +  HF  M  EK +  RRR  F   R     I ++A +I                        T+          T + VVFFGN  F    RG  P+PRK L+RA+A+   V ++DEFRTSK C G CG  +  V G    R+ RC + +  G  L   +CS+      F+ +RD +A+VN+  C    L GR R
Sbjct:  554 RRRDNTGYSDAISQLSSVSMRTPG--GAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRKIGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRG--PLPRKALIRAIALLVPVVLMDEFRTSKACCG-CGKNLVQVNGS---RVFRCISCTPEGDNL---DCSVR-----FI-DRDINASVNIAICGINMLLGRTR 766          
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.000e-8
Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 1705 TTSNVVFFGNGSF-KAMRGSAPVPRKKLVRALAMRTTVFMLDEFRTSKMCPGGCGSVMEDVKGEGGYRMRRCSNVSDAGVALLPENCSLYGEKGPFVCNRDESATVNMTKCCHASLCGRAR 2064
            T + VVFFGN  F    RG  P+PRK L+RA+A+   V ++DEFRTSK C G CG  +  V G    R+ RC + +  G  L   +CS+      F+ +RD +A+VN+  C    L G AR
Sbjct:  656 TWTRVVFFGNALFGHGSRG--PLPRKALIRAIALLVPVVLMDEFRTSKACCG-CGKNLVQVNGS---RVFRCISCTPEGDNL---DCSVR-----FI-DRDVNASVNIAICGINMLLGMAR 761          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
Q8QNA9_ESV1K1.670e-13039.13EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K[more]
A0A6H5L4M4_9PHAE9.570e-11239.67Resolvase/invertase-type recombinase catalytic dom... [more]
A0A6H5JVT4_9PHAE1.830e-10440.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSF5_9PHAE3.260e-4042.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0000161E545.770e-1528.40EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
Q6XLT6_9PHYC1.340e-1426.18FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A6H5JA56_9PHAE4.190e-1429.00DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z996_9STRA4.450e-935.85Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YYB9_9STRA4.480e-931.30Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YYX5_9STRA7.000e-841.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig666contigP-littoralis_Contig666:15496..17559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2064
Hectar predicted targeting categoryother localisation
Exons1
Cds size1158
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791385.5141864-UTR-P-littoralis_Contig666:15495..161191680791385.5141864-UTR-P-littoralis_Contig666:15495..16119Pylaiella littoralis U1_48UTRP-littoralis_Contig666 15496..16119 -
1680791385.5460184-UTR-P-littoralis_Contig666:17277..175591680791385.5460184-UTR-P-littoralis_Contig666:17277..17559Pylaiella littoralis U1_48UTRP-littoralis_Contig666 17278..17559 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791385.5318875-CDS-P-littoralis_Contig666:16119..172771680791385.5318875-CDS-P-littoralis_Contig666:16119..17277Pylaiella littoralis U1_48CDSP-littoralis_Contig666 16120..17277 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig666.9.1prot_P-littoralis_Contig666.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig666 16120..17277 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig666.9.1

>prot_P-littoralis_Contig666.9.1 ID=prot_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp
MVFYDRCWASLDHEAGGSSGENVYSVLCREFLTASGMDPSLFPPTMKSRL
RQPITRDMETSATNLVKIHTMARIIRHIHFRLANDDDVFRLLSPASKYAL
KQKIYKCVIDKNFMGELEGLDFVHLQVIDELRNELRQPLSQELDKPLAYD
LKKSPEMFYRVLAHISRVAEQTSEIHLGILESIRNKPKSERKGLYKRMER
DLCVESRVKPFSLTPMWKLQPCFVQYSSTSLSAAFEGYGDVASFVASEFD
VSGVRRKGYKVSGFRSDGFQVHLSFIALANNKPVPTNTDKLKDAGYDFPK
PARKVVSTCSQPGVFTVSEKRVDAKKVPVDERATVRTTVIDPGCVDVVSV
RTTGLEISTTSRILAQSTCCALSSTDYTATSGTLI*
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mRNA from alignment at P-littoralis_Contig666:15496..17559-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig666.9.1 ID=mRNA_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2064bp|location=Sequence derived from alignment at P-littoralis_Contig666:15496..17559- (Pylaiella littoralis U1_48)
GATGAAGACGAGAAAAAGCCAAAACCGAAGAAGACCAGACGATCAGGCGT GGAGCAAGAGATCCGTGGCGGTGACACATCAAACGATACACGTGTACGGA CAAGCATCATCCCCACGGCCCTTTCCACTCTCCTGTGCAACAACCCTGGC AAGAAGAAACCGATCACGCGTACTCTGGATTGTCTTGCCAGGTACGGCGG GACGTACAGATATCTGACGGGGATCTTCGGTGCTCACGTCTTGCTGCGCC TTCTCGAACGAGGCGAGACAGTGAAAGTCGACATGGTGTTCTACGACCGA TGTTGGGCATCACTGGACCACGAAGCAGGCGGGTCTTCTGGAGAAAATGT ATACAGCGTTCTGTGTCGCGAGTTCCTGACCGCTTCGGGGATGGATCCCT CCCTCTTCCCCCCAACTATGAAGAGCAGACTGAGGCAGCCAATCACTCGA GACATGGAGACTTCCGCAACGAACCTCGTCAAGATACACACGATGGCTAG GATCATCCGACACATTCATTTTAGGCTCGCGAACGACGACGACGTCTTCA GGCTGCTGTCTCCCGCGTCAAAGTACGCCTTAAAACAAAAAATCTACAAG TGTGTGATCGACAAGAACTTCATGGGGGAGCTGGAAGGCCTGGACTTCGT CCATCTCCAGGTGATCGACGAACTGCGAAACGAACTCCGGCAACCACTTT CGCAAGAACTGGACAAGCCGCTCGCGTACGACTTGAAAAAAAGCCCCGAG ATGTTTTACAGGGTTCTGGCACACATCTCCCGTGTGGCAGAACAGACGTC GGAAATCCATCTGGGTATTCTGGAGAGTATCCGCAATAAACCAAAGTCCG AGAGGAAGGGATTGTACAAGAGGATGGAGAGGGACTTGTGTGTCGAGAGC AGGGTCAAGCCTTTCTCGCTGACCCCGATGTGGAAACTCCAACCGTGCTT CGTACAGTACTCGTCGACCTCTCTTAGCGCCGCCTTCGAAGGGTACGGTG ACGTCGCCAGCTTCGTCGCATCGGAGTTTGACGTCTCCGGTGTCCGTAGG AAGGGATACAAGGTCTCTGGATTCAGATCGGATGGCTTCCAGGTTCACCT CTCTTTCATCGCTCTCGCGAACAACAAACCAGTGCCTACTAACACGGACA AGCTGAAAGACGCGGGATATGATTTCCCGAAACCCGCCAGAAAAGTGGTG AGCACTTGTTCACAGCCCGGGGTATTCACGGTGAGCGAGAAGAGAGTAGA CGCGAAGAAAGTCCCCGTTGATGAAAGAGCTACTGTTCGGACGACCGTTA TAGACCCGGGATGCGTGGACGTGGTCAGCGTTCGGACTACCGGCCTCGAG ATCTCCACGACTTCACGCATCCTCGCACAGTCAACGTGCTGTGCGCTCAG TTCAACCGACTACACAGCAACCTCCGGTACATTGATTTAGAGAGGAAGGG AGGCGAAAAGGAGGTCCAGACCAGGGTACAGGGAAGCTCTAAGAGATGAA GACAAAGGAAGGAGCAAGACTGCCAACCTGGATTCTCTTCTGGTCTACAC AAAGTGGGTGGCGAGACACTTTGAAGCAATGTACAGAGAGAAGAACACCA ATGGTCGGAGGAGGACACGTTTCATCACATCACGCCTACTACAAGGGACC ATCGATAAACTGGCCAACAGGATTGTGGACTCCGGAAAAACGAAGTTTCC CTCAACGACGTCGAACGTAGTGTTTTTTGGGAACGGCTCCTTTAAGGCAA TGAGAGGAAGTGCCCCTGTACCGAGGAAGAAGTTGGTTAGAGCCCTGGCC ATGCGTACAACAGTATTTATGCTGGACGAGTTTAGGACCAGTAAGATGTG TCCTGGGGGGTGCGGGTCAGTGATGGAGGATGTAAAGGGAGAAGGGGGCT ATCGGATGCGGCGTTGTTCAAACGTATCGGACGCAGGCGTTGCTCTCCTC CCGGAGAACTGCTCTTTGTACGGAGAAAAGGGACCGTTTGTCTGTAACAG AGACGAGAGCGCGACGGTCAACATGACCAAGTGTTGCCACGCAAGTCTTT GCGGACGTGCTCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig666:15496..17559-

>mRNA_P-littoralis_Contig666.9.1 ID=mRNA_P-littoralis_Contig666.9.1|Name=mRNA_P-littoralis_Contig666.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1158bp|location=Sequence derived from alignment at P-littoralis_Contig666:15496..17559- (Pylaiella littoralis U1_48)
ATGGTGTTCTACGACCGATGTTGGGCATCACTGGACCACGAAGCAGGCGG
GTCTTCTGGAGAAAATGTATACAGCGTTCTGTGTCGCGAGTTCCTGACCG
CTTCGGGGATGGATCCCTCCCTCTTCCCCCCAACTATGAAGAGCAGACTG
AGGCAGCCAATCACTCGAGACATGGAGACTTCCGCAACGAACCTCGTCAA
GATACACACGATGGCTAGGATCATCCGACACATTCATTTTAGGCTCGCGA
ACGACGACGACGTCTTCAGGCTGCTGTCTCCCGCGTCAAAGTACGCCTTA
AAACAAAAAATCTACAAGTGTGTGATCGACAAGAACTTCATGGGGGAGCT
GGAAGGCCTGGACTTCGTCCATCTCCAGGTGATCGACGAACTGCGAAACG
AACTCCGGCAACCACTTTCGCAAGAACTGGACAAGCCGCTCGCGTACGAC
TTGAAAAAAAGCCCCGAGATGTTTTACAGGGTTCTGGCACACATCTCCCG
TGTGGCAGAACAGACGTCGGAAATCCATCTGGGTATTCTGGAGAGTATCC
GCAATAAACCAAAGTCCGAGAGGAAGGGATTGTACAAGAGGATGGAGAGG
GACTTGTGTGTCGAGAGCAGGGTCAAGCCTTTCTCGCTGACCCCGATGTG
GAAACTCCAACCGTGCTTCGTACAGTACTCGTCGACCTCTCTTAGCGCCG
CCTTCGAAGGGTACGGTGACGTCGCCAGCTTCGTCGCATCGGAGTTTGAC
GTCTCCGGTGTCCGTAGGAAGGGATACAAGGTCTCTGGATTCAGATCGGA
TGGCTTCCAGGTTCACCTCTCTTTCATCGCTCTCGCGAACAACAAACCAG
TGCCTACTAACACGGACAAGCTGAAAGACGCGGGATATGATTTCCCGAAA
CCCGCCAGAAAAGTGGTGAGCACTTGTTCACAGCCCGGGGTATTCACGGT
GAGCGAGAAGAGAGTAGACGCGAAGAAAGTCCCCGTTGATGAAAGAGCTA
CTGTTCGGACGACCGTTATAGACCCGGGATGCGTGGACGTGGTCAGCGTT
CGGACTACCGGCCTCGAGATCTCCACGACTTCACGCATCCTCGCACAGTC
AACGTGCTGTGCGCTCAGTTCAACCGACTACACAGCAACCTCCGGTACAT
TGATTTAG
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