prot_P-littoralis_Contig658.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig658.36.1
Unique Nameprot_P-littoralis_Contig658.36.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length57
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig658.36.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.440e-13
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:    1 EVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDK 56
            +V +DR+  A     A +A  NG PWE +Y  VDAANQSNFATP+ AS AHG+DD+
Sbjct:  374 DVERDRMYGARLENQAAVAKSNGTPWETVYLQVDAANQSNFATPIGASQAHGVDDR 429
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig658.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE3.440e-1355.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig658contigP-littoralis_Contig658:163845..164015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig658.36.1mRNA_P-littoralis_Contig658.36.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig658 163845..164015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig658.36.1 ID=prot_P-littoralis_Contig658.36.1|Name=mRNA_P-littoralis_Contig658.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=57bp
EVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNA
HGIDDK*
back to top