mRNA_P-littoralis_Contig650.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 170 bits (431), Expect = 2.800e-47 Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
+TWRVILCWASA R I+VDTQGIP+SLVNLQVRSG+DS+SPFFRQLNIATFGHRVVRY P+T FGK WQE+LPGACLAVLVADAWRDSQVD
Sbjct: 110 DTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVD 200
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE) HSP 1 Score: 170 bits (431), Expect = 2.810e-47 Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
+TWRVILCWASA R I+VDTQGIP+SLVNLQVRSG+DS+SPFFRQLNIATFGHRVVRY P+T FGK WQE+LPGACLAVLVADAWRDSQVD
Sbjct: 110 DTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVD 200
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 8.620e-46 Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
ETWRVILCWASA R I+VD+QGIP SL++LQVRSG+DS+SP FRQLNIATFGHRVVRYTPMT FGK WQE+LPGACLAVLVAD WRDSQVD
Sbjct: 132 ETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVD 222
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5K2W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2W2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.730e-45 Identity = 74/91 (81.32%), Postives = 83/91 (91.21%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
+TWRVILCWASA + I+VDTQGIP+SLVNLQVRSG+D +S FFRQLNIA FGHRVVRY P++ FGK WQE+LPGACLAVLVADAWRDSQVD
Sbjct: 95 DTWRVILCWASAGKRIDVDTQGIPISLVNLQVRSGVDLQSRFFRQLNIAAFGHRVVRYAPISAFGKKWQEQLPGACLAVLVADAWRDSQVD 185
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 164 bits (415), Expect = 4.040e-45 Identity = 76/90 (84.44%), Postives = 84/90 (93.33%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQV 270
E+WRVI CWASA REIEVDTQGIP+SLVNLQVRSG+DS+SPFFRQLNIATFGHRVVRY P+T FGK WQ++LPGACLAVLVA+ WRDSQV
Sbjct: 132 ESWRVIFCWASAGREIEVDTQGIPISLVNLQVRSGLDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVAEVWRDSQV 221
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5JDB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB7_9PHAE) HSP 1 Score: 159 bits (402), Expect = 2.280e-43 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
ETWRVILCWASA REIEV+TQGIP+SLV+LQVRSG+DS+SP FR L IATFGHRVVRY P+T F K WQE+LPGACL VLVADAWRDSQVD
Sbjct: 125 ETWRVILCWASAGREIEVNTQGIPISLVDLQVRSGVDSQSPLFRPLTIATFGHRVVRYAPITAFRKKWQEQLPGACLVVLVADAWRDSQVD 215
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 157 bits (398), Expect = 6.450e-43 Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQV 270
E+WRVILCWASA R IEVDT GIP+SLV+LQVRSGIDS+SPFFRQLNIATFGHRVVRY P+T FGK WQ++LPGACLAVLVAD WRDSQV
Sbjct: 112 ESWRVILCWASAGRRIEVDT-GIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQV 200
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5KR88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR88_9PHAE) HSP 1 Score: 146 bits (369), Expect = 4.240e-42 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEK-LPGACLAVLVADA 252
+TWRVI CWASA R I+VDTQGIP+SLVNLQVRSG+DS+SPFFRQLNIATFGHRVVRY P+ FGK WQE+ LPGACLAVLVADA
Sbjct: 165 DTWRVIFCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPIAAFGKKWQEQQLPGACLAVLVADA 249
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5KE79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE79_9PHAE) HSP 1 Score: 152 bits (383), Expect = 5.250e-41 Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMF----------GKTWQEKLPGACLAVLVADAWRDSQV 270
+TW VILCWASA R I+VDTQGIP+SLVNLQVRSG+DS+SP FRQLNIATFGHRVVRY P+T F GK WQ++LPGACLAVLVAD WRDSQV
Sbjct: 112 DTWLVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPLFRQLNIATFGHRVVRYAPITAFVXXXXXXXXXGKKWQKQLPGACLAVLVADVWRDSQV 211
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 4.170e-38 Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1
Query: 1 ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATFGHRVVRYTPMTMFGKTWQEKLPGACLAVLVADAWRDSQVD 273
+TWR ILCW SA R IE+D +GIP SL NLQVR+GI+S SP FRQLNIA+FGHRVVRY P+T F TW+++LPGACLAVLVADAWRD Q+D
Sbjct: 135 DTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLD 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig650.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig650.17.1 >prot_P-littoralis_Contig650.17.1 ID=prot_P-littoralis_Contig650.17.1|Name=mRNA_P-littoralis_Contig650.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp ETWRVILCWASADREIEVDTQGIPMSLVNLQVRSGIDSKSPFFRQLNIATback to top mRNA from alignment at P-littoralis_Contig650:53852..54126+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig650.17.1 ID=mRNA_P-littoralis_Contig650.17.1|Name=mRNA_P-littoralis_Contig650.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=275bp|location=Sequence derived from alignment at P-littoralis_Contig650:53852..54126+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig650:53852..54126+ >mRNA_P-littoralis_Contig650.17.1 ID=mRNA_P-littoralis_Contig650.17.1|Name=mRNA_P-littoralis_Contig650.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=273bp|location=Sequence derived from alignment at P-littoralis_Contig650:53852..54126+ (Pylaiella littoralis U1_48)back to top |