prot_P-littoralis_Contig649.43.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig649.43.1
Unique Nameprot_P-littoralis_Contig649.43.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length113
Homology
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BLAST of mRNA_P-littoralis_Contig649.43.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 4.550e-10
Identity = 35/105 (33.33%), Postives = 52/105 (49.52%), Query Frame = 0 
Query:    1 MPDKAVIRLYDKSKSGVYDLYLTEQKGLHGNISGA-----CSASHFNRIWREGCQFLKLTQGRDFMLCNVCTLANQTLHGTPGGEATTDSSIRESTEAALATHLK 100
            MP+     LY KSK  +Y+ Y    + L+G    +     CS ++FN++W      LKL    DFMLC +CTL  + +HG  G     D + RE  ++    HL+
Sbjct:  269 MPNSDQSYLYLKSKLELYEEYSKNTRELYGQDPASLAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERERHQSVYKEHLQ 373
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig649.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE4.550e-1033.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig649contigP-littoralis_Contig649:94174..99162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig649.43.1mRNA_P-littoralis_Contig649.43.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig649 94147..99260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig649.43.1 ID=prot_P-littoralis_Contig649.43.1|Name=mRNA_P-littoralis_Contig649.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
MPDKAVIRLYDKSKSGVYDLYLTEQKGLHGNISGACSASHFNRIWREGCQ
FLKLTQGRDFMLCNVCTLANQTLHGTPGGEATTDSSIRESTEAALATHLK
VNSHPFNPGKKR*
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