prot_P-littoralis_Contig648.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig648.1.1
Unique Nameprot_P-littoralis_Contig648.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length157
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig648.1.1 vs. uniprot
Match: A0A6H5L4U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.650e-11
Identity = 62/171 (36.26%), Postives = 79/171 (46.20%), Query Frame = 0 
Query:    1 MSRWLGIRKSGASTAV--------DGTP----KQTSS--------PRAGRRRSSEETLDGAASRHSSQQSQAGSEDVDVAISGSGGGDVSAAAGCEVGGTNNPNRDLGDGSSAFESDWEVLEDMG-ELKGFQADGGSCGEHERADVIERPLSPGVDFSSAYMIDKDGGVGQ 150
            MS+WLG+R+SGA +          D  P    KQ SS        PR GRRRSSEET+D   SR SS+  +   +    A  G                     R  GDG S    DWEV++    +  G  + GG           ERPLSPGVDFS+AYM+D++G  G+
Sbjct:   72 MSKWLGLRRSGARSPTSSASALPPDDVPAFLGKQNSSVAACSTPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHG---------------------RGPGDGVSDECCDWEVVQHTSADFSGLVSVGGEA-------EAERPLSPGVDFSAAYMVDREGEEGR 214
[Close]
BLAST of mRNA_P-littoralis_Contig648.1.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 9.220e-8
Identity = 62/171 (36.26%), Postives = 80/171 (46.78%), Query Frame = 0 
Query:    1 MSRWLGIRKSGA---STAVDGTP---------KQTSS--------PRAGRRRSSEETLDGAASRHSSQQSQAGSEDVDVAISGSGGGDVSAAAGCEVGGTNNPNRDLGDGSSAFESDWEVLEDMG-ELKGFQADGGSCGEHERADVIERPLSPGVDFSSAYMIDKDGGVGQ 150
            MS+WLG+R+SGA   ++A    P         KQ  S        PR GRRRSSEET+D   SR SS+  +   +    A  G G GD  +   C                     DWEV++    +L G     G  GE E     ERPLSPGVDFS+A M+D++G  G+
Sbjct:    1 MSKWLGLRRSGARSPTSAASALPPDDVPAFLGKQDGSGAAFSAPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECC---------------------DWEVVQHTSADLSGLV---GLDGEAE----AERPLSPGVDFSAACMVDREGEEGR 143
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig648.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4U9_9PHAE8.650e-1136.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIG2_ECTSI9.220e-836.26EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig648contigP-littoralis_Contig648:1223..1693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig648.1.1mRNA_P-littoralis_Contig648.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig648 1223..1820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig648.1.1 ID=prot_P-littoralis_Contig648.1.1|Name=mRNA_P-littoralis_Contig648.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=157bp
MSRWLGIRKSGASTAVDGTPKQTSSPRAGRRRSSEETLDGAASRHSSQQS
QAGSEDVDVAISGSGGGDVSAAAGCEVGGTNNPNRDLGDGSSAFESDWEV
LEDMGELKGFQADGGSCGEHERADVIERPLSPGVDFSSAYMIDKDGGVGQ
LERDDDS
back to top