mRNA_P-littoralis_Contig645.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 533 bits (1373), Expect = 1.260e-188 Identity = 255/260 (98.08%), Postives = 255/260 (98.08%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLACLTILGRGNVFGSIYNLSWMST TVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQG SYTGKEGKPTVGYQVTVNHAGRVL VTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRF ILKLAMTYQKQERLDYVFFTCCILH MLHTHDGMGGLEED
Sbjct: 128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 387
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 5.980e-141 Identity = 193/260 (74.23%), Postives = 218/260 (83.85%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLA LTILGRGN F SIY +SWMS TVQ +FH+FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN SYTGKEG PTVGYQVTVNHAGR + VTEGFT STNDKT +C D V++IRTD QY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK F I K+AM Y +QER+D VFFTCCILH MLHT DGM L E+
Sbjct: 99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVEN 358
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.160e-132 Identity = 195/288 (67.71%), Postives = 217/288 (75.35%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLA LTILGRGN F SIY +SWMS TVQ +FH+FC HFA EMYDE I LP+EE+G+LD VM QY++LGF GA+GS DVTHI WSRCPYNQ SYTGKEG PT+ YQVTV+HAGR + VTEGFTGSTNDKTI+C D AV++I TDK Y EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RF ILKLAM YQ QER+D VFFTC ILH MLHT DGM L E+
Sbjct: 86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVEN 373
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 360 bits (925), Expect = 2.030e-122 Identity = 178/260 (68.46%), Postives = 201/260 (77.31%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLA LTILG+GN F SI+ +SWMS TVQ VFH+FC FA EMYDEHI LP+EE+G+L VM QY++LG CPYNQ SYTGK+ PT+ YQVTV+HA R + VTEGFTGSTNDKTI+C D AVD+IRTDKQY EK F ++ +DGTT TLKGCY + DNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RF ILKLAM YQ QER+D VFFTCCILH MLHT DGM L E+
Sbjct: 21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 263
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 349 bits (895), Expect = 2.070e-118 Identity = 165/218 (75.69%), Postives = 186/218 (85.32%), Query Frame = 1
Query: 127 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
MYDEHI LP+EE+G+LD V+ QY++LGF GAMGS DVTHI WSRCPYNQ SYTGKEG PT+GYQVTV+HAGR + VTEGFTGSTNDKT +C D AV++IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK R IL LAM +Q QER+D VFFTCCILH MLHT DGM L E+
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 218
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 345 bits (884), Expect = 4.500e-115 Identity = 164/260 (63.08%), Postives = 202/260 (77.69%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLACL IL RGNVF IY++S++S TV FH+FC++FA E+YDE+++LP+ E+ L +VM QY+++GFPGA+GSTDVTHI W CPYNQ YTGKEGKPTV +QVTV+H+GRVL VT GFTG+TNDKTII D+AV RIRTD Y E+ + ++ +DG KGCYL+VDNGYHKWR LI PSK P+ DL+FSKRLES RKDVEC+FGILK RF I KLA+ + KQE +D VFFTCCILH MLH+ D G + E+
Sbjct: 84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 341
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 345 bits (884), Expect = 7.740e-114 Identity = 164/260 (63.08%), Postives = 202/260 (77.69%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLACL IL RGNVF IY++S++S TV FH+FC++FA E+YDE+++LP+ E+ L +VM QY+++GFPGA+GSTDVTHI W CPYNQ YTGKEGKPTV +QVTV+H+GRVL VT GFTG+TNDKTII D+AV RIRTD Y E+ + ++ +DG KGCYL+VDNGYHKWR LI PSK P+ DL+FSKRLES RKDVEC+FGILK RF I KLA+ + KQE +D VFFTCCILH MLH+ D G + E+
Sbjct: 175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 432
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 340 bits (873), Expect = 2.250e-112 Identity = 168/260 (64.62%), Postives = 197/260 (75.77%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
VLACL IL RGN F IY++S++S T FH+F +FA EMY EHIFLP+ + + +VM QY++LGF GA GSTDVTHI W CPYNQ SYTGKEG PTV YQVTV+H RVL VT GFTGSTNDK+II D AV +IR D Y+EK FTV++ DGT LKGCYL+VDNGYHKW LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K RF ILKL++ Y KQE +D VFFTCCILH MLH++D +EE+
Sbjct: 159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEE 416
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 298 bits (764), Expect = 6.480e-97 Identity = 137/189 (72.49%), Postives = 158/189 (83.60%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYP 567
VLA LTILGRGN F SIY +SWMS +TVQ +FH FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN SYTGKEG PT+GYQVTVNHAGR VTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+ + P
Sbjct: 126 VLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 292 bits (747), Expect = 7.410e-95 Identity = 144/254 (56.69%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 19 ILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGHSYTGKEGKPTVGYQVTVNHAGRVLTVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFIILKLAMTYQKQERLDYVFFTCCILHYMLHTHDGMGGLEED 780
+LG+GN F + LS MS S Q FH+FC HFA EM+DEHI+LP+ LD VMG + +LG+ GA GSTDVTHIGW+ CP+ G S+TGKEG PT+ Y VTV+H GR L VT GFTG+TNDKTII D V++IRT QY E+ + + K +GT +GC+LIVDNGYH+W LI PSKYP D FS+ LESVRKDV CF ILKL M Y K+E +D +FFTCCILH MLHT DG+ EE+
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCFR--------ILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEEN 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig645.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig645.34.1 >prot_P-littoralis_Contig645.34.1 ID=prot_P-littoralis_Contig645.34.1|Name=mRNA_P-littoralis_Contig645.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp VLACLTILGRGNVFGSIYNLSWMSTSTVQKVFHQFCEHFATEMYDEHIFLback to top mRNA from alignment at P-littoralis_Contig645:118433..119413+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig645.34.1 ID=mRNA_P-littoralis_Contig645.34.1|Name=mRNA_P-littoralis_Contig645.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig645:118433..119413+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig645:118433..119413+ >mRNA_P-littoralis_Contig645.34.1 ID=mRNA_P-littoralis_Contig645.34.1|Name=mRNA_P-littoralis_Contig645.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig645:118433..119413+ (Pylaiella littoralis U1_48)back to top |