prot_P-littoralis_Contig641.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig641.34.1
Unique Nameprot_P-littoralis_Contig641.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.860e-18
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVL 79
            ++L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +  + L   L
Sbjct: 1193 LFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKLQHQL 1271          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.380e-18
Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D RRS    L  +G
Sbjct:  601 LYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNRRSPTGYLFSLG 683          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 4.110e-18
Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:   87 LYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 169          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5JRF1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.100e-17
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDD 70
            ++L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +
Sbjct:  237 LFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSE 306          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.160e-17
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDD 70
            ++L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +
Sbjct:  210 LFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSE 279          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.650e-17
Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct: 1303 LYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 1385          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.170e-17
Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  524 LYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLG 606          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.200e-17
Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  683 LYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 765          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.030e-16
Identity = 43/83 (51.81%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   TR+D SYAV  L R  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS+   L  +G
Sbjct:  213 LYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSITGYLFFLG 295          
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Match: A0A6H5JN29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN29_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.500e-16
Identity = 43/83 (51.81%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    1 MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVG 83
            +YL   +R+D+SYAV  LTR  A P   HM AAK VL YL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  317 LYLAQCSRYDLSYAVHQLTRACANPAQVHMAAAKHVLWYLGGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig641.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE1.860e-1851.90Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JN55_9PHAE3.380e-1854.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE4.110e-1853.01Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF1_9PHAE1.100e-1755.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE1.160e-1755.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG5_9PHAE1.650e-1753.01Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JF46_9PHAE2.170e-1753.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE2.200e-1753.01CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JW03_9PHAE1.030e-1651.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN29_9PHAE1.500e-1651.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 6..74
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig641contigP-littoralis_Contig641:126333..126641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig641.34.1mRNA_P-littoralis_Contig641.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig641 126333..126927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig641.34.1 ID=prot_P-littoralis_Contig641.34.1|Name=mRNA_P-littoralis_Contig641.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
MYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVH
RKGDMTLQGFTDSDFAADDDTRRSLHRVLVHVGWWCNFVCCCTAKGCFAK
YY*
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