mRNA_P-littoralis_Contig64.150.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.150.1 vs. uniprot
Match: Q8QNJ6_ESV1K (EsV-1-77 n=2 Tax=root TaxID=1 RepID=Q8QNJ6_ESV1K) HSP 1 Score: 414 bits (1064), Expect = 2.790e-142 Identity = 200/246 (81.30%), Postives = 218/246 (88.62%), Query Frame = 3
Query: 252 P*DGEKYNSCPSVLPVNVGILNNLRNCLEVMKINSQHCPDGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASQGYFDDAVLTIFESIVHPLSSLLPDRKNLTGRLIGVFEAFRTKMTPVQRATFDKIWVRDITGGIGAVNSKYIKLHDTYSSSKRKNTLSLNKFSQDVEEIKQIYKRYTNKFMDVWLLAHIFMIQNTTGSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSESQNLDSCLVL 989
P G K + + VNVGILNNLR+CLEVMKINSQHCP GCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKAS G FDDAVLT+FES+VHPLSSLLPDR NL GRL+GVFE FR KMTPVQR TFD+IWVRDITGGI +N+KY+KLH+ Y +S+RK SL FSQDVEEIKQ+YKRYTNKFMDVWLLAHIFMIQNT GSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSE+Q+LDSCL++
Sbjct: 85 PKTGIKTSVAQACSAVNVGILNNLRSCLEVMKINSQHCPGGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASHGSFDDAVLTVFESLVHPLSSLLPDRANLAGRLVGVFETFRNKMTPVQRVTFDRIWVRDITGGIADINAKYVKLHENYCASRRKRAPSLANFSQDVEEIKQLYKRYTNKFMDVWLLAHIFMIQNTAGSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSENQHLDSCLLM 330
BLAST of mRNA_P-littoralis_Contig64.150.1 vs. uniprot
Match: B5LWA8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA8_9PHYC) HSP 1 Score: 141 bits (356), Expect = 3.950e-36 Identity = 81/226 (35.84%), Postives = 121/226 (53.54%), Query Frame = 3
Query: 312 LNNLRNCLEVMKINSQHCPDGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASQGYFDDAVLTIFESIVHPLSSLLPDRKNLTGRLIGVFEAFRTKMTPVQRATFDKIWVRDITGGIGAVNSKYIKLHDTYSSSKRKNTLSLNKFSQDVEEIKQIYKRYTNKFMDVWLLAHIFMIQNTTGSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSESQNLDSCLVL 989
L +LRNCL+ + + G A RIHFIDPR+D+V++LPDG +++A+S Y H G F A T++E+ VHPL SL+PDR L GR+ V E + +TP QR F W + G + V ++++ ++ K ++ + Q Y N F D+WLLA F+ QN G ++Y GS H L E +L G KI ++++L +CL L
Sbjct: 98 LKHLRNCLQFARNKTP----GYADRIHFIDPRMDLVAILPDGNVYKAVSHYITHLDEVGDFPAARRTVYEAFVHPLLSLVPDRVGLEGRMERVMERTISLLTPRQRKFFTLSWETGVVGNVARV----VQIYKQFAKPKH------------LKSLLQAYTDMVNHFTDLWLLAEFFVAQNY-GMTAGIVYAGSRHSLNFENFLEELGYEKIKVVQNRDLSACLAL 302
BLAST of mRNA_P-littoralis_Contig64.150.1 vs. uniprot
Match: Q6XLU4_9PHYC (FirrV-1-I2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU4_9PHYC) HSP 1 Score: 124 bits (311), Expect = 1.610e-29 Identity = 75/227 (33.04%), Postives = 114/227 (50.22%), Query Frame = 3
Query: 312 LNNLRNCLEVMKINSQHCPDGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASQGYFDDAVLTIFESIVHPLSSLLPDRKNLTGRLIGVFEAFRTKMTPVQRATFDKIWVRDITGGIGAVNSKYI-KLHDTYSSSKRKNTLSLNKFSQDVEEIKQIYKRYTNKFMDVWLLAHIFMIQNTTGSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSESQNLDSCLVL 989
L LRNCL + + Q RIHFIDPR D+V++LPDG +++A+ YA H Q + L ++E+ VHPL S++ L GRL + + + MTP Q W D+ +N Y+ +++D SS S + + + Y NKF D+WLLA+ F N + G ++Y GS H L EKYL+ + H+ +Q+L +CL +
Sbjct: 95 LTRLRNCLGIDQQQQQQ--RDSENRIHFIDPRTDLVAILPDGTVYQAVLHYAKHLRRQHKQPELKLLLYETFVHPLLSIVNPDGTLQGRLNVIMQKYMENMTPSQHRFLCSKWHNDVI-----LNVLYVYRVYDELSSD-----------SIGIVPLLEAYTDMVNKFTDLWLLANFFKADNDS-MTGAIVYAGSKHSLHFEKYLAEMQYDLLDHNSNQDLSACLTI 302
BLAST of mRNA_P-littoralis_Contig64.150.1 vs. uniprot
Match: Q6XM25_9PHYC (FirrV-1-B11 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM25_9PHYC) HSP 1 Score: 121 bits (303), Expect = 1.710e-28 Identity = 77/230 (33.48%), Postives = 114/230 (49.57%), Query Frame = 3
Query: 312 LNNLRNCLEVMKINSQHCPDGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASQGYFDDAVLTIFESIVHPLSSLLP---DRKNLTGRLIGVFEAFRTKMTPVQRATFDKIWVRDITGGIGAVNSKYIKLHDTYSSSKRKNTLSLNKFSQDVEEIKQIYKRYTNKFMDVWLLAHIFMIQNTTGSNGMVMYLGSLHGLEIEKYLSLHGLRKIHHSESQNLDSCLVLK 992
L NLR CL P G RIH+IDPR D+V++LP+G++ EAI YAHH SQ + L ++E+ +HPL S++ D L GRL V + + MT Q F W D+ I V Y + S+ + + + Y N+FMD+WLLA+ F+ +N+ G G ++Y GS H L EKYL+ + +++L +CL L+
Sbjct: 93 LQNLRGCL----------PKG--PRIHYIDPRTDLVAILPNGQILEAIVHYAHHLHSQHKDLELKLLLYETFIHPLLSIVSPSGDSAVLEGRLNTVLQKYVANMTTAQMGFFRDKWSVDVIANIENVRRIYHECTTRLSN---------------LPALLEAYTDTVNRFMDLWLLANFFVAENS-GMTGSIIYAGSKHSLHFEKYLAEMRYELLEQFTNRDLSACLALR 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.150.1 >prot_P-littoralis_Contig64.150.1 ID=prot_P-littoralis_Contig64.150.1|Name=mRNA_P-littoralis_Contig64.150.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp MKINSQHCPDGCAKRIHFIDPRVDMVSVLPDGKLFEAISFYAHHKASQGYback to top mRNA from alignment at P-littoralis_Contig64:571032..572026+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.150.1 ID=mRNA_P-littoralis_Contig64.150.1|Name=mRNA_P-littoralis_Contig64.150.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=995bp|location=Sequence derived from alignment at P-littoralis_Contig64:571032..572026+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:571032..572026+ >mRNA_P-littoralis_Contig64.150.1 ID=mRNA_P-littoralis_Contig64.150.1|Name=mRNA_P-littoralis_Contig64.150.1|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig64:571032..572026+ (Pylaiella littoralis U1_48)back to top |