mRNA_P-littoralis_Contig64.66.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A6H5L0U1_9PHAE (Copper homeostasis protein cutC homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U1_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.670e-105 Identity = 180/241 (74.69%), Postives = 195/241 (80.91%), Query Frame = 2
Query: 341 VGVVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGE 1063
V VVLECCLEGVESA QARSGGAHRIELCANLAQGGVTPS GDIEG+LL V+GSHTR HVLIRPRPGD +YS LEK+VMEKDVSAAVKAGAHGVVIG V A XXXXXXX +CS+TFHRAFDCCTTD + A+E+L+RLGVDRVLTSG SAWDGRA I+RLVEAS GRI ILPGAGVT GNV+QLLL TGA+EVHVGSACQE VPRT RED +V +G VGE
Sbjct: 12 VDVVLECCLEGVESASQARSGGAHRIELCANLAQGGVTPSAGDIEGALLAVRGSHTRVHVLIRPRPGDFVYSVLEKQVMEKDVSAAVKAGAHGVVIG----------------VAKAXXXXXXXXXAKDACSITFHRAFDCCTTDEVAAMESLVRLGVDRVLTSGRHESAWDGRAVISRLVEASGGRIGILPGAGVTHGNVKQLLLHTGAKEVHVGSACQEKVPRTALREDATVCVGLVGE 236
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A835YMB7_9STRA (Copper homeostasis protein cutC homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB7_9STRA) HSP 1 Score: 187 bits (474), Expect = 8.370e-52 Identity = 108/231 (46.75%), Postives = 137/231 (59.31%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHT---RAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTAS--CSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVP 1024
V+LE C+EGVE A A + G HRIELCA L +GG TPS+G +E + + H + HVL+RPRPG YS E + +DV A AGAHGV +GAL EDGSID A +V A A G +VTFHRAFD C+T +L+AL L GVD VLTSG AA+AW+GR I +V + +++ AGV+ NV +L+ TGA VHVGSA E + P
Sbjct: 3 VLLEACVEGVEGAVAAAAAGVHRIELCAGLLEGGTTPSLGTVEEVIACLSEQHLTRCKVHVLVRPRPGSFCYSAAEARAALRDVRAMRHAGAHGVAVGALREDGSIDTHALASIV-ALAKDDMQGAAGECPPPMAVTFHRAFDACSTPALQALAQLAERGVDGVLTSGRAATAWEGRHVIRDMVRSGVAGTTVIAAAGVSASNVARLMQATGAEAVHVGSAILEALEEAAP 232
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A1Q8AJ90_9BACT (PF03932 family protein CutC n=2 Tax=FCB group TaxID=1783270 RepID=A0A1Q8AJ90_9BACT) HSP 1 Score: 183 bits (464), Expect = 2.320e-50 Identity = 109/216 (50.46%), Postives = 133/216 (61.57%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSA 994
V++E C++ +ESA A +GGAHRIELCANL +GG TPS G + L VL+RPR GD +YS E VM +D+ A AGAHG V+G L DG+ID E T +L+ AA VTFHRAFD C D+ EALETLI LGV+RVLTSG AA+A G TI RLV + GRI +LPG G+T NV L+ TG EVH+ A
Sbjct: 5 VLVEACVDSIESALAAAAGGAHRIELCANLVEGGTTPSAGTLA---LCRTRLRIPIFVLVRPRGGDFLYSAAELAVMLEDIRRAKDAGAHGAVVGVLRADGAIDVERTRQLIAAARPL-----------QVTFHRAFDVCR-DAGEALETLIGLGVERVLTSGQAATAPQGADTIARLVRRAAGRIGVLPGGGITADNVEALVRSTGVAEVHLTGA 205
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A356FDM0_9BACT (PF03932 family protein CutC n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FDM0_9BACT) HSP 1 Score: 181 bits (459), Expect = 9.180e-50 Identity = 109/216 (50.46%), Postives = 138/216 (63.89%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSA 994
++LECC+ VESA A GGA R+ELC+ L GGVTPS I+ + + VL+RPR G Y+ +E VM++DV++A ++GA G+V+GAL EDGSID E TA L++AAA S TFHRAFD T D L ALETL LGVDRVLTSG A A DG + RL +A+ GRI ILPG G+ N R+++ TGA E+HVGSA
Sbjct: 4 ILLECCVGSVESAVNAALGGAARVELCSALELGGVTPSRASIK---MARERIDIPLFVLVRPRGGSFHYTPIELDVMKEDVASARRSGADGIVLGALREDGSIDAEQTAGLIEAAA-----------GASTTFHRAFDS-TPDPLAALETLCELGVDRVLTSGRAPRAEDGTELLGRLQQAAAGRIGILPGGGINHENCRRIIELTGAGEIHVGSA 204
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A6B9Z4G3_9SPHI (PF03932 family protein CutC n=2 Tax=unclassified Mucilaginibacter TaxID=2617802 RepID=A0A6B9Z4G3_9SPHI) HSP 1 Score: 181 bits (459), Expect = 1.230e-49 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEAFLWAIRSQMR 1096
V+LE C V SA A+ GGA R+ELC NLA+GG TPS G I LL K H + +VLIRPR GD +Y++LE +VM+ D+ ++AG G+VIG L DGS+D E LV+ A VTFHRAFD C D +ALE +I +G +R+LTSGG ++A +G I L+E + GRI+I+PG+G+T NV L+ TGA EVH + N + + + + + + + S R
Sbjct: 8 VILEVCSNSVTSAIAAQQGGAVRVELCENLAEGGTTPSYGQI---LLARKHLHIKLYVLIRPRRGDFLYTDLEYEVMQADIRNCIEAGCDGIVIGILRADGSVDKERCTELVRLARQWGL---------GVTFHRAFDMCA-DQFQALEDIIEMGCERILTSGGKSTAMEGANVIAHLIEKAAGRIAIMPGSGITENNVADLVHFTGATEVHSSARVNVNGGMAYKNDHILLMTNSIADEYSLDVTSAER 244
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A3N2KXR9_9BACT (PF03932 family protein CutC n=3 Tax=Bacteroidales TaxID=171549 RepID=A0A3N2KXR9_9BACT) HSP 1 Score: 181 bits (458), Expect = 1.670e-49 Identity = 105/229 (45.85%), Postives = 136/229 (59.39%), Query Frame = 2
Query: 350 VLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDV 1036
+LE C ++S + A++GGAHRIELC+ L++GGVTPS G I + V H+LIRPR GD +YSE E ++ME D+ AV +G GVVIGAL DG ID T RL++ A CSVTFHRAFD C +ALE +I LG DR+LTSG A SA +G T+ RL + GRI++L G GVT N R++L TG E+H + T R+ V
Sbjct: 11 ILEVCCGDIQSIYAAKTGGAHRIELCSALSEGGVTPSAGLIREA---VSSGIPAVHILIRPRGGDFLYSEDEIRLMETDIRCAVSSGVDGVVIGALTSDGDIDMTTCRRLIETAG-----------DCSVTFHRAFDLCRNPQ-KALEDIISLGCDRILTSGLARSAMEGAETLRRLNRQAAGRITLLAGGGVTPDNAREILSSTGLNELHASAKTSVASAMTFRRQSV 224
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: UPI001747C6C5 (copper homeostasis protein CutC n=2 Tax=Mucilaginibacter TaxID=423349 RepID=UPI001747C6C5) HSP 1 Score: 179 bits (454), Expect = 6.370e-49 Identity = 100/212 (47.17%), Postives = 131/212 (61.79%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVH 982
V+LE C SA A+ GGA R+ELC NLA+GG TPS G I +L K H + +VLIRPR GD +Y++LE +VM+ D+ ++AG GVVIG L DGS+D E LV+ A VTFHRAFD C D +ALE +I +G +R+LTSGG ++A +G I LVE + GRI+I+PG+G+T NV L+ TG EVH
Sbjct: 8 VILEVCANSAPSAIAAQEGGATRVELCENLAEGGTTPSYGQI---ILARKHLHIKLYVLIRPRRGDFLYTDLEFEVMQADIRTCIEAGCDGVVIGMLKADGSVDKERCTELVRLARQWGL---------GVTFHRAFDMCA-DQFQALEDIIEIGCERILTSGGKSTAMEGATVIAHLVEKAAGRIAIMPGSGITENNVADLVHFTGVTEVH 206
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A7K2YXT2_9ACTN (PF03932 family protein CutC n=1 Tax=Streptomyces sp. SID3343 TaxID=2690260 RepID=A0A7K2YXT2_9ACTN) HSP 1 Score: 179 bits (454), Expect = 7.170e-49 Identity = 104/212 (49.06%), Postives = 131/212 (61.79%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVH 982
+ E C++ V A A GAHR+ELCA+L +GG+TPS+G IE +L V R HV+IRPR GD ++ E E ME+DV AA +AGAHGVVIGAL +G ID T RL+ AA CSVTFHRAFD T D LE LI LGV RVLTSG +S +G I LV+ + GRI ++PG G+T N+ +++ TGA EVH
Sbjct: 11 LTYEICIDDVPGALAAERAGAHRVELCADLFEGGITPSLGLIETTLRAVDA--IRVHVIIRPRGGDFVFDEYEVAAMERDVIAAREAGAHGVVIGALTPEGDIDRPTIERLLAAAG-----------DCSVTFHRAFDM-TRDPFATLEALIELGVHRVLTSGQDSSVLEGAPLIADLVDRAAGRIVVMPGGGITARNIERVIAATGAHEVH 208
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A1Q7DP79_9BACT (PF03932 family protein CutC n=2 Tax=unclassified Gemmatimonadetes TaxID=234665 RepID=A0A1Q7DP79_9BACT) HSP 1 Score: 179 bits (453), Expect = 8.900e-49 Identity = 114/258 (44.19%), Postives = 143/258 (55.43%), Query Frame = 2
Query: 347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGS-HTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEAFLWAIRSQMRPRGTERV 1117
+++E C++ +ESA A +GGAHRIELCANL +GG TPS G +L V + VLIRPR GD +YS E VM +D+ A +AGAHGVV G L DG ID + L+ AA VTFHRAFD C D+ ALETLI LGVDRVLTSG AA+A +G TI RLV + GRI ILPG G+T N L+ TG EVH+ A + V + + W++ R R R+
Sbjct: 5 LLVEACVDSIESALAAAAGGAHRIELCANLVEGGTTPSAG----TLAVCRARLDIPIFVLIRPRGGDFLYSAPELAVMMEDIRRAKQAGAHGVVTGVLRADGGIDEDRARELIAAARPL-----------QVTFHRAFDVCR-DAAAALETLITLGVDRVLTSGQAATAPEGAQTIARLVRQAAGRIGILPGGGITAENAAALVQATGVTEVHLTGAVTQQSGMAFRAPTVVIGNAAPRSEYEWSVTDAERIRSVVRL 246
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A2E8H155_9BACT (PF03932 family protein CutC n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A2E8H155_9BACT) HSP 1 Score: 178 bits (452), Expect = 1.170e-48 Identity = 115/237 (48.52%), Postives = 146/237 (61.60%), Query Frame = 2
Query: 356 ECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEA 1066
E C++GV A A+SGGAHR+ELC L+ GG TPS+G + + V HVLIRPR GD + E VM +D+ AA ++GA GVVIG+L DG D E TARLV+ A SVTFHRAFD D+ ALE LI LG+DRVLTSG A+SAW+GR + LV+A+ GRI I+PGAG+ +V +L+ ETG +EVH SA +E V T R +V +G G A
Sbjct: 9 EVCVDGVTGAIAAQSGGAHRLELCQTLSVGGTTPSVGLMRSTKASVD---LPVHVLIRPRAGDFHFDTAEFDVMRRDIEAAGESGAEGVVIGSLETDGGPDVERTARLVEDARPM-----------SVTFHRAFDV-VPDADAALEGLIGLGIDRVLTSGQASSAWEGRGLLRHLVDAAGGRIVIMPGAGIDETHVGELIHETGVQEVHF-SARREVVMATGDR---AVTMGNDGSA 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.66.2 >prot_P-littoralis_Contig64.66.2 ID=prot_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp MTSVADTTAVGVVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIback to top mRNA from alignment at P-littoralis_Contig64:311388..316330- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.66.2 ID=mRNA_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4943bp|location=Sequence derived from alignment at P-littoralis_Contig64:311388..316330- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:311388..316330- >mRNA_P-littoralis_Contig64.66.2 ID=mRNA_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=CDS|length=909bp|location=Sequence derived from alignment at P-littoralis_Contig64:311388..316330- (Pylaiella littoralis U1_48)back to top |