mRNA_P-littoralis_Contig64.66.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.66.2
Unique NamemRNA_P-littoralis_Contig64.66.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A6H5L0U1_9PHAE (Copper homeostasis protein cutC homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U1_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 1.670e-105
Identity = 180/241 (74.69%), Postives = 195/241 (80.91%), Query Frame = 2
Query:  341 VGVVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGE 1063
            V VVLECCLEGVESA QARSGGAHRIELCANLAQGGVTPS GDIEG+LL V+GSHTR HVLIRPRPGD +YS LEK+VMEKDVSAAVKAGAHGVVIG                V  A XXXXXXX    +CS+TFHRAFDCCTTD + A+E+L+RLGVDRVLTSG   SAWDGRA I+RLVEAS GRI ILPGAGVT GNV+QLLL TGA+EVHVGSACQE VPRT  RED +V +G VGE
Sbjct:   12 VDVVLECCLEGVESASQARSGGAHRIELCANLAQGGVTPSAGDIEGALLAVRGSHTRVHVLIRPRPGDFVYSVLEKQVMEKDVSAAVKAGAHGVVIG----------------VAKAXXXXXXXXXAKDACSITFHRAFDCCTTDEVAAMESLVRLGVDRVLTSGRHESAWDGRAVISRLVEASGGRIGILPGAGVTHGNVKQLLLHTGAKEVHVGSACQEKVPRTALREDATVCVGLVGE 236          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A835YMB7_9STRA (Copper homeostasis protein cutC homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB7_9STRA)

HSP 1 Score: 187 bits (474), Expect = 8.370e-52
Identity = 108/231 (46.75%), Postives = 137/231 (59.31%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHT---RAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTAS--CSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVP 1024
            V+LE C+EGVE A  A + G HRIELCA L +GG TPS+G +E  +  +   H    + HVL+RPRPG   YS  E +   +DV A   AGAHGV +GAL EDGSID    A +V A A        G      +VTFHRAFD C+T +L+AL  L   GVD VLTSG AA+AW+GR  I  +V +     +++  AGV+  NV +L+  TGA  VHVGSA  E +    P
Sbjct:    3 VLLEACVEGVEGAVAAAAAGVHRIELCAGLLEGGTTPSLGTVEEVIACLSEQHLTRCKVHVLVRPRPGSFCYSAAEARAALRDVRAMRHAGAHGVAVGALREDGSIDTHALASIV-ALAKDDMQGAAGECPPPMAVTFHRAFDACSTPALQALAQLAERGVDGVLTSGRAATAWEGRHVIRDMVRSGVAGTTVIAAAGVSASNVARLMQATGAEAVHVGSAILEALEEAAP 232          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A1Q8AJ90_9BACT (PF03932 family protein CutC n=2 Tax=FCB group TaxID=1783270 RepID=A0A1Q8AJ90_9BACT)

HSP 1 Score: 183 bits (464), Expect = 2.320e-50
Identity = 109/216 (50.46%), Postives = 133/216 (61.57%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSA 994
            V++E C++ +ESA  A +GGAHRIELCANL +GG TPS G +    L          VL+RPR GD +YS  E  VM +D+  A  AGAHG V+G L  DG+ID E T +L+ AA               VTFHRAFD C  D+ EALETLI LGV+RVLTSG AA+A  G  TI RLV  + GRI +LPG G+T  NV  L+  TG  EVH+  A
Sbjct:    5 VLVEACVDSIESALAAAAGGAHRIELCANLVEGGTTPSAGTLA---LCRTRLRIPIFVLVRPRGGDFLYSAAELAVMLEDIRRAKDAGAHGAVVGVLRADGAIDVERTRQLIAAARPL-----------QVTFHRAFDVCR-DAGEALETLIGLGVERVLTSGQAATAPQGADTIARLVRRAAGRIGVLPGGGITADNVEALVRSTGVAEVHLTGA 205          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A356FDM0_9BACT (PF03932 family protein CutC n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FDM0_9BACT)

HSP 1 Score: 181 bits (459), Expect = 9.180e-50
Identity = 109/216 (50.46%), Postives = 138/216 (63.89%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSA 994
            ++LECC+  VESA  A  GGA R+ELC+ L  GGVTPS   I+   +  +       VL+RPR G   Y+ +E  VM++DV++A ++GA G+V+GAL EDGSID E TA L++AAA             S TFHRAFD  T D L ALETL  LGVDRVLTSG A  A DG   + RL +A+ GRI ILPG G+   N R+++  TGA E+HVGSA
Sbjct:    4 ILLECCVGSVESAVNAALGGAARVELCSALELGGVTPSRASIK---MARERIDIPLFVLVRPRGGSFHYTPIELDVMKEDVASARRSGADGIVLGALREDGSIDAEQTAGLIEAAA-----------GASTTFHRAFDS-TPDPLAALETLCELGVDRVLTSGRAPRAEDGTELLGRLQQAAAGRIGILPGGGINHENCRRIIELTGAGEIHVGSA 204          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A6B9Z4G3_9SPHI (PF03932 family protein CutC n=2 Tax=unclassified Mucilaginibacter TaxID=2617802 RepID=A0A6B9Z4G3_9SPHI)

HSP 1 Score: 181 bits (459), Expect = 1.230e-49
Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEAFLWAIRSQMR 1096
            V+LE C   V SA  A+ GGA R+ELC NLA+GG TPS G I   LL  K  H + +VLIRPR GD +Y++LE +VM+ D+   ++AG  G+VIG L  DGS+D E    LV+ A               VTFHRAFD C  D  +ALE +I +G +R+LTSGG ++A +G   I  L+E + GRI+I+PG+G+T  NV  L+  TGA EVH  +    N       + + +    + + +   + S  R
Sbjct:    8 VILEVCSNSVTSAIAAQQGGAVRVELCENLAEGGTTPSYGQI---LLARKHLHIKLYVLIRPRRGDFLYTDLEYEVMQADIRNCIEAGCDGIVIGILRADGSVDKERCTELVRLARQWGL---------GVTFHRAFDMCA-DQFQALEDIIEMGCERILTSGGKSTAMEGANVIAHLIEKAAGRIAIMPGSGITENNVADLVHFTGATEVHSSARVNVNGGMAYKNDHILLMTNSIADEYSLDVTSAER 244          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A3N2KXR9_9BACT (PF03932 family protein CutC n=3 Tax=Bacteroidales TaxID=171549 RepID=A0A3N2KXR9_9BACT)

HSP 1 Score: 181 bits (458), Expect = 1.670e-49
Identity = 105/229 (45.85%), Postives = 136/229 (59.39%), Query Frame = 2
Query:  350 VLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDV 1036
            +LE C   ++S + A++GGAHRIELC+ L++GGVTPS G I  +   V       H+LIRPR GD +YSE E ++ME D+  AV +G  GVVIGAL  DG ID  T  RL++ A             CSVTFHRAFD C     +ALE +I LG DR+LTSG A SA +G  T+ RL   + GRI++L G GVT  N R++L  TG  E+H  +        T  R+ V
Sbjct:   11 ILEVCCGDIQSIYAAKTGGAHRIELCSALSEGGVTPSAGLIREA---VSSGIPAVHILIRPRGGDFLYSEDEIRLMETDIRCAVSSGVDGVVIGALTSDGDIDMTTCRRLIETAG-----------DCSVTFHRAFDLCRNPQ-KALEDIISLGCDRILTSGLARSAMEGAETLRRLNRQAAGRITLLAGGGVTPDNAREILSSTGLNELHASAKTSVASAMTFRRQSV 224          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: UPI001747C6C5 (copper homeostasis protein CutC n=2 Tax=Mucilaginibacter TaxID=423349 RepID=UPI001747C6C5)

HSP 1 Score: 179 bits (454), Expect = 6.370e-49
Identity = 100/212 (47.17%), Postives = 131/212 (61.79%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVH 982
            V+LE C     SA  A+ GGA R+ELC NLA+GG TPS G I   +L  K  H + +VLIRPR GD +Y++LE +VM+ D+   ++AG  GVVIG L  DGS+D E    LV+ A               VTFHRAFD C  D  +ALE +I +G +R+LTSGG ++A +G   I  LVE + GRI+I+PG+G+T  NV  L+  TG  EVH
Sbjct:    8 VILEVCANSAPSAIAAQEGGATRVELCENLAEGGTTPSYGQI---ILARKHLHIKLYVLIRPRRGDFLYTDLEFEVMQADIRTCIEAGCDGVVIGMLKADGSVDKERCTELVRLARQWGL---------GVTFHRAFDMCA-DQFQALEDIIEIGCERILTSGGKSTAMEGATVIAHLVEKAAGRIAIMPGSGITENNVADLVHFTGVTEVH 206          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A7K2YXT2_9ACTN (PF03932 family protein CutC n=1 Tax=Streptomyces sp. SID3343 TaxID=2690260 RepID=A0A7K2YXT2_9ACTN)

HSP 1 Score: 179 bits (454), Expect = 7.170e-49
Identity = 104/212 (49.06%), Postives = 131/212 (61.79%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVH 982
            +  E C++ V  A  A   GAHR+ELCA+L +GG+TPS+G IE +L  V     R HV+IRPR GD ++ E E   ME+DV AA +AGAHGVVIGAL  +G ID  T  RL+ AA             CSVTFHRAFD  T D    LE LI LGV RVLTSG  +S  +G   I  LV+ + GRI ++PG G+T  N+ +++  TGA EVH
Sbjct:   11 LTYEICIDDVPGALAAERAGAHRVELCADLFEGGITPSLGLIETTLRAVDA--IRVHVIIRPRGGDFVFDEYEVAAMERDVIAAREAGAHGVVIGALTPEGDIDRPTIERLLAAAG-----------DCSVTFHRAFDM-TRDPFATLEALIELGVHRVLTSGQDSSVLEGAPLIADLVDRAAGRIVVMPGGGITARNIERVIAATGAHEVH 208          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A1Q7DP79_9BACT (PF03932 family protein CutC n=2 Tax=unclassified Gemmatimonadetes TaxID=234665 RepID=A0A1Q7DP79_9BACT)

HSP 1 Score: 179 bits (453), Expect = 8.900e-49
Identity = 114/258 (44.19%), Postives = 143/258 (55.43%), Query Frame = 2
Query:  347 VVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGS-HTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEAFLWAIRSQMRPRGTERV 1117
            +++E C++ +ESA  A +GGAHRIELCANL +GG TPS G    +L V +        VLIRPR GD +YS  E  VM +D+  A +AGAHGVV G L  DG ID +    L+ AA               VTFHRAFD C  D+  ALETLI LGVDRVLTSG AA+A +G  TI RLV  + GRI ILPG G+T  N   L+  TG  EVH+  A  +          V +        + W++    R R   R+
Sbjct:    5 LLVEACVDSIESALAAAAGGAHRIELCANLVEGGTTPSAG----TLAVCRARLDIPIFVLIRPRGGDFLYSAPELAVMMEDIRRAKQAGAHGVVTGVLRADGGIDEDRARELIAAARPL-----------QVTFHRAFDVCR-DAAAALETLITLGVDRVLTSGQAATAPEGAQTIARLVRQAAGRIGILPGGGITAENAAALVQATGVTEVHLTGAVTQQSGMAFRAPTVVIGNAAPRSEYEWSVTDAERIRSVVRL 246          
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Match: A0A2E8H155_9BACT (PF03932 family protein CutC n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A2E8H155_9BACT)

HSP 1 Score: 178 bits (452), Expect = 1.170e-48
Identity = 115/237 (48.52%), Postives = 146/237 (61.60%), Query Frame = 2
Query:  356 ECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSIGDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGAHGVVIGALLEDGSIDCETTARLVQAAAXXXXXXXVGTASCSVTFHRAFDCCTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISILPGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGEA 1066
            E C++GV  A  A+SGGAHR+ELC  L+ GG TPS+G +  +   V       HVLIRPR GD  +   E  VM +D+ AA ++GA GVVIG+L  DG  D E TARLV+ A              SVTFHRAFD    D+  ALE LI LG+DRVLTSG A+SAW+GR  +  LV+A+ GRI I+PGAG+   +V +L+ ETG +EVH  SA +E V  T  R   +V +G  G A
Sbjct:    9 EVCVDGVTGAIAAQSGGAHRLELCQTLSVGGTTPSVGLMRSTKASVD---LPVHVLIRPRAGDFHFDTAEFDVMRRDIEAAGESGAEGVVIGSLETDGGPDVERTARLVEDARPM-----------SVTFHRAFDV-VPDADAALEGLIGLGIDRVLTSGQASSAWEGRGLLRHLVDAAGGRIVIMPGAGIDETHVGELIHETGVQEVHF-SARREVVMATGDR---AVTMGNDGSA 226          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.66.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0U1_9PHAE1.670e-10574.69Copper homeostasis protein cutC homolog n=1 Tax=Ec... [more]
A0A835YMB7_9STRA8.370e-5246.75Copper homeostasis protein cutC homolog n=1 Tax=Tr... [more]
A0A1Q8AJ90_9BACT2.320e-5050.46PF03932 family protein CutC n=2 Tax=FCB group TaxI... [more]
A0A356FDM0_9BACT9.180e-5050.46PF03932 family protein CutC n=1 Tax=Planctomycetes... [more]
A0A6B9Z4G3_9SPHI1.230e-4941.60PF03932 family protein CutC n=2 Tax=unclassified M... [more]
A0A3N2KXR9_9BACT1.670e-4945.85PF03932 family protein CutC n=3 Tax=Bacteroidales ... [more]
UPI001747C6C56.370e-4947.17copper homeostasis protein CutC n=2 Tax=Mucilagini... [more]
A0A7K2YXT2_9ACTN7.170e-4949.06PF03932 family protein CutC n=1 Tax=Streptomyces s... [more]
A0A1Q7DP79_9BACT8.900e-4944.19PF03932 family protein CutC n=2 Tax=unclassified G... [more]
A0A2E8H155_9BACT1.170e-4848.52PF03932 family protein CutC n=1 Tax=Gemmatimonadac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:311388..316330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog356851.JOAN01000003_gene1575
Preferred namecutC
PFAMsCutC
Model size1664
Max annot lvl201174|Actinobacteria
KEGG koko:K06201
Hectar predicted targeting categoryother localisation
Exons8
Evalue4.92e-53
EggNOG OGsCOG3142@1|root,COG3142@2|Bacteria,2GKI8@201174|Actinobacteria,4DFAF@85008|Micromonosporales
Ec32 ortholog descriptioncopper homeostasis protein
Ec32 orthologEc-26_006050.1
DescriptionParticipates in the control of copper homeostasis
Cds size909
COG categoryP
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.66.2prot_P-littoralis_Contig64.66.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 311830..316017 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791333.2674594-UTR-P-littoralis_Contig64:311387..3118291680791333.2674594-UTR-P-littoralis_Contig64:311387..311829Pylaiella littoralis U1_48UTRP-littoralis_Contig64 311388..311829 -
1680791333.3933635-UTR-P-littoralis_Contig64:316017..3163301680791333.3933635-UTR-P-littoralis_Contig64:316017..316330Pylaiella littoralis U1_48UTRP-littoralis_Contig64 316018..316330 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791333.2807038-CDS-P-littoralis_Contig64:311829..3119871680791333.2807038-CDS-P-littoralis_Contig64:311829..311987Pylaiella littoralis U1_48CDSP-littoralis_Contig64 311830..311987 -
1680791333.2935069-CDS-P-littoralis_Contig64:312568..3127151680791333.2935069-CDS-P-littoralis_Contig64:312568..312715Pylaiella littoralis U1_48CDSP-littoralis_Contig64 312569..312715 -
1680791333.3060262-CDS-P-littoralis_Contig64:313266..3133791680791333.3060262-CDS-P-littoralis_Contig64:313266..313379Pylaiella littoralis U1_48CDSP-littoralis_Contig64 313267..313379 -
1680791333.3193674-CDS-P-littoralis_Contig64:313976..3141491680791333.3193674-CDS-P-littoralis_Contig64:313976..314149Pylaiella littoralis U1_48CDSP-littoralis_Contig64 313977..314149 -
1680791333.332755-CDS-P-littoralis_Contig64:314546..3146061680791333.332755-CDS-P-littoralis_Contig64:314546..314606Pylaiella littoralis U1_48CDSP-littoralis_Contig64 314547..314606 -
1680791333.3470404-CDS-P-littoralis_Contig64:314920..3150491680791333.3470404-CDS-P-littoralis_Contig64:314920..315049Pylaiella littoralis U1_48CDSP-littoralis_Contig64 314921..315049 -
1680791333.3655455-CDS-P-littoralis_Contig64:315673..3157361680791333.3655455-CDS-P-littoralis_Contig64:315673..315736Pylaiella littoralis U1_48CDSP-littoralis_Contig64 315674..315736 -
1680791333.380114-CDS-P-littoralis_Contig64:315951..3160171680791333.380114-CDS-P-littoralis_Contig64:315951..316017Pylaiella littoralis U1_48CDSP-littoralis_Contig64 315952..316017 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.66.2

>prot_P-littoralis_Contig64.66.2 ID=prot_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp
MTSVADTTAVGVVLECCLEGVESAHQARSGGAHRIELCANLAQGGVTPSI
GDIEGSLLVVKGSHTRAHVLIRPRPGDSMYSELEKKVMEKDVSAAVKAGA
HGVVIGALLEDGSIDCETTARLVQAAAAAAAAAAVGTASCSVTFHRAFDC
CTTDSLEALETLIRLGVDRVLTSGGAASAWDGRATITRLVEASKGRISIL
PGAGVTRGNVRQLLLETGAREVHVGSACQENVPRTVPREDVSVRLGFVGE
AFLWAIRSQMRPRGTERVGVRYNAGGYLRRYDVRRMPGDEDLEISFRGSS
KP*
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mRNA from alignment at P-littoralis_Contig64:311388..316330-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.66.2 ID=mRNA_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4943bp|location=Sequence derived from alignment at P-littoralis_Contig64:311388..316330- (Pylaiella littoralis U1_48)
CGCGTTCGCAACCGGCATGCAAGGGGAGGGGGGGAGCGTCCCCTGTTTTA TGCAAAGTGGCATTTTGTGCACCGAGAGACTCCGCATCACCGCATCAGCA CACCCGGCAGTACGTCCATCGTATTCCCGTCCGACCAAAGCAAGCGCCGA AACTTGCGTTGTTCCCGCAGCCGATTGCCTGTTCCAACCGAAGTCAAGTG GCTGAAACCAAGTGGATGCCTGAACTACTGCCGTGTAGCATTGCACCCTG AGCTTAGAGCGGTAAAAATAGAAATCCTGACAGTCCTGCGATAAACCTGG TACGTCGTATGATATGACTTCAGTCGCTGATACTACTGCTGTTGGCGTGG TGCTGGAATGCTGTCTCGAGGGCGTGGAGGTGACATAACGACTGATGAAT TGTCGAGTTGGTTCTGCACTACTGCTTATACGAGTACTGTCGACCCCAGT TTGGCATTCCTCGTTCTGCGCGTCTCTGTGTATTTACAGCAATGGCGCAG CAGTAGCAAAAATACAAACATCTCGGTGCTGCTGTATCTTGAATACCGAC AGTCACTACCACGACTGACCTCGTATTATCTGCCACCCTGACAGTCCGCT CACCAAGCCCGAAGCGGCGGCGCCCATCGGATAGAACTCTGCGCCAACTT AGCTCAGGTACTTGCTTTAATGAAGGCCTGTGGAGTGAACCACACATCAA GGATACCGATGTGTAAATGTACACTTTTTCTGTCGATAATGTATCACTTC GTTCGAAAGTACAGAAATATTGTTTGACGCGTTTCTAAGCAGTATCTCCG TCACTCACTAGAGGGGTGTATAGGGGGCTACAAGAAGGCCGTGGGTGAGT CAACTCCAATCTGACTTCCTTTATCGCTCTTTCGGTGTGTAACCGCGTTT GCTTCGAGGATCATAATGCCCGTCGTCCTGTCGGGGTGTGCTTTCTACCC ATATGATGGAGGCGCGATTCTCGTTGTCAGTGATGGGAGCTATGATAATC CTTTACACCACATACCATAGTCATTAGGGGTGCATGGAAACGTGGACAGG ATTAGCCGGTTTGTTGAATTAAATACCTAGTTGGAGACGTATGTCACCGA CGTAAAGCGCGTATTCTGCATACGTACCTCAAGCGTTTCTGTGTTCCGAC ACTACAACATAGGAACGACCCTTAAAAAGTTGAGATGGACAACGACAGAC GCAGCAGAAGTCTGCGATTGACAACTCGCCTGCCTCTGGTGTACTGGCTC TGTGTCGAAACGCCTTTTAATTGTGGAACAGGGGGGCGTGACGCCGTCTA TAGGGGACATCGAAGGGAGCCTGCTGGTTGTGAAAGGTTCCCACACGCGA GCCCATGTGCTTATCCGACCACGCCCCGGAGACTCCATGTATTCCGAACT TGAAAAGAAGGTGACCTCGCGTCGCCGCGATGATCGTGTAATATAGTAAA AATTCAGAGAGAGAGAGAGAGAGACAGAGAGGGAGGAACAGAGAGAATAA GTAGACATCATTTCACAGGGAAAAAATGAAAAAAATGCTGCGTGTCGGAA AAAAGTGGAGGGAAACGGGGACGAAGTGATACGGTGTTTGGTGAGATCCA TCGAATATTTTTTCGGCTCCCAGTTATTGGCTGTATCATGTGTGCTCTCT GGCTGAGAGAGAGCCCACCCCTGCTGGGGTTGCCTGCGGCTGTGCCCGTT TCTGCATCTTCACCCGTTGTTCAGGTGATGGAAAAGGACGTGTCAGCGGC AGTGAAGGCCGGGGCGCATGGAGTGGTCATCGGGGTATGTACGCATACCA GTAGGCGTTTCTAGGTTTTCGCAGTAAACGCGATTTGATGTTCGACTCGA GTATAAATTACCGGCAGAGCCTTACTTTAACTTCATACTATAGTTTATCT AGCTTTATTCCAGGCTTCAGCTGTTGTCATACCTTGCTTTCAAAATGTGT CTTAAATCTGAGTACCTGCTATCACGGCATAAGCAAAAACGTGGGGTGGG AATCAATCTGATGACCATTTCGCCTATGAACTCAAGCCACGTGGCGCAAA TGGATTGGTTTCTTTGGATTTTTTGCAGTGCATCAGTAGATGCTCCACCA GACGGACACTTGTACGCTACATGCATAAACCTGCAACTGTCCACGAGTAT TCCGGATTCCGACGTTTTGGTCTTACCTTAGGCGCTGCTGGAAGACGGTA GTATCGACTGCGAGACAACAGCACGACTAGTACAGGCGGCAGCAGCGGCG GCGGCGGCGGCGGCGGTGGGAACTGCCTCTTGCAGCGTTACGTTTCATCG AGCTTTCGACTGCTGCACAACCGATTCGCTTGAAGCCTTGGAAACCCTCA TCAGGTATCTGGCGAATGGACCCCCCCTCAAGTGCAGTAGTATCGAATGC AGCAGTGTCGATGACAGCGATTTAGATCGGGGCTCTGCAATTATATTTCT GTGGTGAGAGTTAATCAAGTGCGGCACCGCCGCCGTCATAAATGGCTTTC AGTCGGGGGTTTTGTTACGGTACTGTTTTTTATTGCGAAACAACACAATC TCAAACGTGTGTGTGTGCCGTTGGGTGGCACGGTGGCGCGAAAACCAGAC GTAAAGCATCCGGTAGGTGGGACGTGGGGCTCCTCCTTCTTACTCATCTA GGTTCAGTATTGTTTCCTGTACTTTTGTGTTGTCCTTCCATACTTCGAAG CATAATTTTGCCCGTTGTTCTCTCCGTTTTCGTTTCGAAATCCAATCATT GCTGATCAGCGTTGCAGCCGCAGCAGCAGTACTTCTGAGCAAAGTTTCAA CCATGCACCTTCCCATACTATTCAAATCCATTGCCGGTGACTCCTAGGAA TGCGGGAGTGTTGGCCTGGCGCACACCCGTACGCAGTATACCCCCCCCCC CACCCCACTTCTCCTGTTCCTCAACGGACCCCCCTCTCATCGATGTCGCA GACTAGGAGTCGATCGTGTGTTGACCTCGGGTGGGGCAGCCAGCGCGTGG GACGGGCGAGCCACTATCACTAGACTCGTCGAGGCGTCAAAGGGGCGCAT TTCTATACTGCCAGGTGCCCGAAACACCGCTTTTTCTGCGAGGACTGTTT GCACTGCTACCTACCAGATATGTTGTTCTACACAGCACAGGTGTTTCGTG TCTCAGCGCTACGTGCAGACGACGCTACATCAGGTGCCGGCTATTGAAAA GCACACGGAATTCATATTCGCACAGGGTTCTGCACCTTCAACCCGAAACT GAAGCATTTTCATTCTTTGGGCGAATCAACGATGACGTACAACACTGTTT TTTTTGTTGCAAACTCCGCCCGAGGTTTTGACAGGTGTGAGGTCAGTTCT CACTACCGGCGTTAGTCTATGGGTGGGGAAAATGTTTTGCCTACTGGGTG ATCCGAGTATGCCGTATCGTATCTCATGTTCAGTCTATCGTACCAAATCG ATTCTGAAACGATGTCAGACACAAATGCGCGGCCAGCCATTTTTCGCTCA AATGCCGGATCGTGACCCACGCCTCGTAATAGTAAATAGTGGCCGGGGCA TGTTTCACGCTTGTACGGGCAATCATCCTTGTGGCTGACAGTTGGCGTGT TCGATGGCAGCACAGGTGCAGGGGTTACAAGGGGCAACGTGAGGCAGCTC TTGCTGGAAACAGGGGCAAGAGAAGTGCACGTCGGCTCTGCGTGCCAGGA GAACGTTCCCAGAACCGTTCCTCGCGAGGATGTTTCCGTTCGCTTAGGCT TTGTGGGCGAAGGTGTGACATCTACCTACATTACTGAGCGAGTCAAAATC GTGCACGTTTCTTGCGTGTAGCTGTTTTCTTCGAAGAGTAGTGTGTCATG GGCACTTTTTAGTTAGCACGTTGGACGAGCAACATTCAACTAAGCTTTTA GTACGGATTGACACATGTTGATCTGCAGGCGCGCACTCGTTCTGAATGGA GGAGAGAGTGCGTTTACTTCGACCGATTTGATTTTGTGATCCGAATAACT GTTTGGCCCTTCTCGCTGCACGCGCAGGAGGTGCCGATTCGAACGTTTTG AAGCGAGTCACCGCTCGTCGAGTGTCCGACATGCTTCAAACGTTGAGCGA GGAACCGCCGTGATGCCGTAGTCACCAACTGACTGCGGCGCCTGTCTTTG CCGGGGCTCCGCTGTTGCGGCGGTAAAGATCTCATTGGAGTACACGTTCT TTTTTTAGGCTTTGACTCCTTCTCTTCGGGCTTTCCGCGGCGGTAGCAGT ATCTCTTGCCGATCTCGTGGCAATCATTCGTGGCAACATTGTCGCTTATC TGCCCGCTGATTGTTGTTCTCGTTGTTGCATGCATGCCACAAGCTTTTCT ATGGGCTATCCGCAGTCAAATGCGGCCCCGGGGGACTGAACGCGTCGGGG TTAGATACAACGCCGGGGGCTATCTCCGGAGATATGATGTGCGACGTATG CCCGGTGATGAAGATCTGGAAATCTCTTTTCGAGGGAGTTCCAAGCCATA AAGATGGCCAGCGGGGTTTGCGGAATATCGACGGGTCTGTATTCTTCCAT GAGATTTAAATGATGCACACGTGCGGGATCGAGTTTTGGTACGTGGATAG GTCCTGGATCGGCAGTCAATGTCATGTGTGCGGAATATAAACGGGTCTGT ATTCTTCCGTGAGATTTACATGATGTACGTGCAGGACTGAGTTTTGGTAT GTGGATAGGTCCTGGATCGGCAATCAATGTTGCGGGTGCCCGGGAGGGAT GTGTACGTAGACGCTAGTGCTCTCACGCTTCGAGTGGAAACCCGACTACA GGTACCATGTGACGATCATGAACGGTTGTCGATGTCGTTAATCACCATGT TAAAAACAACAGTATCGTGGTATCGCTTGTTGAAAACACTGCCGTGCTTT CCCGGCGGAACAAAACTATTCAGCTGTCTGTCTTGTATATTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:311388..316330-

>mRNA_P-littoralis_Contig64.66.2 ID=mRNA_P-littoralis_Contig64.66.2|Name=mRNA_P-littoralis_Contig64.66.2|organism=Pylaiella littoralis U1_48|type=CDS|length=909bp|location=Sequence derived from alignment at P-littoralis_Contig64:311388..316330- (Pylaiella littoralis U1_48)
ATGACTTCAGTCGCTGATACTACTGCTGTTGGCGTGGTGCTGGAATGCTG
TCTCGAGGGCGTGGAGTCCGCTCACCAAGCCCGAAGCGGCGGCGCCCATC
GGATAGAACTCTGCGCCAACTTAGCTCAGGGGGGCGTGACGCCGTCTATA
GGGGACATCGAAGGGAGCCTGCTGGTTGTGAAAGGTTCCCACACGCGAGC
CCATGTGCTTATCCGACCACGCCCCGGAGACTCCATGTATTCCGAACTTG
AAAAGAAGGTGATGGAAAAGGACGTGTCAGCGGCAGTGAAGGCCGGGGCG
CATGGAGTGGTCATCGGGGCGCTGCTGGAAGACGGTAGTATCGACTGCGA
GACAACAGCACGACTAGTACAGGCGGCAGCAGCGGCGGCGGCGGCGGCGG
CGGTGGGAACTGCCTCTTGCAGCGTTACGTTTCATCGAGCTTTCGACTGC
TGCACAACCGATTCGCTTGAAGCCTTGGAAACCCTCATCAGACTAGGAGT
CGATCGTGTGTTGACCTCGGGTGGGGCAGCCAGCGCGTGGGACGGGCGAG
CCACTATCACTAGACTCGTCGAGGCGTCAAAGGGGCGCATTTCTATACTG
CCAGGTGCAGGGGTTACAAGGGGCAACGTGAGGCAGCTCTTGCTGGAAAC
AGGGGCAAGAGAAGTGCACGTCGGCTCTGCGTGCCAGGAGAACGTTCCCA
GAACCGTTCCTCGCGAGGATGTTTCCGTTCGCTTAGGCTTTGTGGGCGAA
GCTTTTCTATGGGCTATCCGCAGTCAAATGCGGCCCCGGGGGACTGAACG
CGTCGGGGTTAGATACAACGCCGGGGGCTATCTCCGGAGATATGATGTGC
GACGTATGCCCGGTGATGAAGATCTGGAAATCTCTTTTCGAGGGAGTTCC
AAGCCATAA
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