mRNA_P-littoralis_Contig638.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A6H5KQT6_9PHAE (Pyr_redox_dim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT6_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.570e-32 Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 322 RGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV*PDDPLQDREEAK 558
RGVAVSG Y+ KQ P M AAC+TVH VQGVGFERVAVWIPSR FFAQGQGYTA+SR KTL+GLFLV PDD LQDRE A+
Sbjct: 101 RGVAVSGTYIVKQWPFMVAACMTVHRVQGVGFERVAVWIPSRGFFAQGQGYTAVSRGKTLDGLFLVLPDDVLQDRELAR 179
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A1C7LPE7_GRIFR (ATP-dependent DNA helicase n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7LPE7_GRIFR) HSP 1 Score: 65.5 bits (158), Expect = 3.950e-8 Identity = 50/164 (30.49%), Postives = 75/164 (45.73%), Query Frame = 1
Query: 43 EYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRD--W--GDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAK-QRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV 519
E L LVL RG KV++T+N+WQ G++N G++ D W G + + ++ T+ P + G G + I+P P + G VA+ Q PL A +TVH QG+ + V + S F G + A+SR K L GL L+
Sbjct: 1225 EAVGLEPHLVLARGAKVMITRNIWQKHGLVNGATGIIEDIIWAEGSERSDLPIAVLVSCKTYSGPTLWRTQPREGFPEG--IPIVPI------TPIKSTFELKGKTVARTQLPLRLAWAVTVHKSQGLTLGHLRVGLGSTEF-CSGLTFVALSRAKALNGLMLI 1379
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: UPI0018E284FC (uncharacterized protein LOC119782800 n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E284FC) HSP 1 Score: 64.3 bits (155), Expect = 9.780e-8 Identity = 53/175 (30.29%), Postives = 80/175 (45.71%), Query Frame = 1
Query: 1 KKLERDQGRHPIVLEYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDW--GDTIASIAAEIVEQDPTHKRPAWVEVELTT-GKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFL 516
K LE + P Y L +VL+L +G +V++ KN+ + G++N CG V + +T ++ Q H+ L + + I P EDR A S + +Q PL A +TVH VQGV ++ V + FA GQ Y A+SR KT+ GL +
Sbjct: 1379 KLLEGSHAKAP----YTSLSEVLLLGKGARVMLCKNIDVSDGLVNGVCGTVTEIIPAET-KDFPKKVYVQFDDHRVGVMRRKSLRCLSQDLVDSTPIEPEEDR----------ATSKGGMRRQFPLKLAWAVTVHKVQGVTVDKAVVCLDK--IFAAGQAYVALSRVKTISGLII 1536
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A4S9T1T5_AURPU (ATP-dependent DNA helicase n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S9T1T5_AURPU) HSP 1 Score: 62.8 bits (151), Expect = 3.150e-7 Identity = 56/167 (33.53%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 43 EYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVA----VSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV*PDD 531
E DLP VL L G +V+V +N+ G++N + G V+D I E+ +DP + VE++ TG+ + P D + +P R + Y Q PL+ A TVH Q + ++V + I S+ F G YTAISR KTL GL L P D
Sbjct: 1736 EAGDLPSVLTLTLGSRVMVMENLSIHDGVVNGSFGTVKD----IRWRQGEVPRRDPPYA--VLVELDNHTGRTLPN-----PLPDGSRVIPIFRSTHTVQHLGLTYRRTQFPLILAWATTVHRSQSLTLQKVVLDI-SQHQFTSGLLYTAISRVKTLGGLLLEEPVD 1890
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A816DS98_9BILA (ATP-dependent DNA helicase n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A816DS98_9BILA) HSP 1 Score: 62.4 bits (150), Expect = 4.290e-7 Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 1
Query: 1 KKLERDQGRHPIVLEYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV 519
K++++++ +H + + L L + +V++TKN+ T G+ N G + ++ +T + + I+ + + K V G + I + + R + KQ PL + IT+H QG+ ++V I ++ FF G GYTA+SR +TLEGLFL+
Sbjct: 1641 KEIKQNESKHTKKINKS-----LRLAKNARVMITKNICVTDGLANGVTGRIVEFVETNNAHVSHIIIKCDSPKVGRLHRVSCPHCHGRDTICVIRECDSIDQQYSDVRSIKA-----IKQFPLRLSWAITIHKAQGITVDQVI--ISTKDFFGSGMGYTALSRVRTLEGLFLI 1801
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A818ZNL6_9BILA (ATP-dependent DNA helicase n=6 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818ZNL6_9BILA) HSP 1 Score: 62.4 bits (150), Expect = 4.310e-7 Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 1
Query: 1 KKLERDQGRHPIVLEYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV 519
K++++++ +H + + L L + +V++TKN+ T G+ N G + ++ +T + + I+ + + K V G + I + + R + KQ PL + IT+H QG+ ++V I ++ FF G GYTA+SR +TLEGLFL+
Sbjct: 1033 KEIKQNESKHTKKINKS-----LRLAKNARVMITKNICVTDGLANGVTGRIVEFVETNNAHVSHIIIKCDSPKVGRLHRVSCPHCHGRDTICVIRECDSIDQQYSDVRSIKA-----IKQFPLRLSWAITIHKAQGITVDQVI--ISTKDFFGSGMGYTALSRVRTLEGLFLI 1193
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A4V4HBA8_DENBC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4V4HBA8_DENBC) HSP 1 Score: 60.8 bits (146), Expect = 1.100e-6 Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = 1
Query: 55 LPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYC------RGVAVSGAYVAK-QRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV 519
L + +VL RG KV+VT+N+WQ KG++N T G + D ++ +++ P V +E T G S + P ED VP + +G + ++ Q PL A +TVH QG+ +V + + + F G + A+SR K L GL ++
Sbjct: 531 LENEIVLARGAKVMVTRNLWQNKGLVNGTIGYIADIIWAPGTVRSDL---------PLAVLIECKTYTGP-SIWRTEPREDFPQGVPIVPILVLKQNFEYNGRHCSRMQVPLRLAWAVTVHKSQGLTMSKVQIGLGKKEFCI-GLTFVALSRVKDLGGLMIL 681
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A0F9ZN00_9BACT (Pif1, pif, PIF1 5'-to-3' DNA helicase-like protein, ATP-dependent DNA helicase PIF1 n=1 Tax=Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13 TaxID=1619061 RepID=A0A0F9ZN00_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.240e-6 Identity = 49/158 (31.01%), Postives = 69/158 (43.67%), Query Frame = 1
Query: 43 EYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQDPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFL 516
+Y P +L L G KV++ KN KG+IN +CG+VR +I E K +E +T +N + Y G VS Q PL A IT+H QG+ + + V F GQ Y A+SR KT++GL+L
Sbjct: 71 KYCKAPQILELKEGCKVMLLKNHNFAKGLINGSCGIVR-----------KIEENAVLVKFDNGIEESIT----------------KNTFEYYREGELVSSR---DQYPLRLAYGITIHKSQGMTLDELVV--DCNRIFECGQAYVALSRIKTIDGLYL 196
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A819EY78_9BILA (ATP-dependent DNA helicase n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A819EY78_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 1.490e-6 Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 1
Query: 67 LVLHRGLKVVVTKNVWQTKGIINATCGVVRDWGDTIASIAAEIVEQ--DPTHKRPAWVEVELTTGKGSGSTVKILPFEDRNVWVPYCRGVAVSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFLV 519
L L R +V++TKN+ G+ N G V ++ ++ + + I+ + PT R V G+ + + DR +V + KQ PL + +T+H QG+ ++V I ++ F G GYTA+SR +TLEGLF++
Sbjct: 160 LRLARNARVMITKNICVNDGLANGVTGHVGEFVESNNTEVSHIIMKCDSPTIGRLHRVSCSHCHGRDTICVTRESDIIDRQDFV-------LQSKKAVKQFPLHLSWAMTIHKAQGITVDQVV--ISTKDLFGSGMGYTALSRVRTLEGLFII 303
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Match: A0A0C3BX73_HEBCY (Uncharacterized protein (Fragment) n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C3BX73_HEBCY) HSP 1 Score: 58.9 bits (141), Expect = 3.090e-6 Identity = 56/186 (30.11%), Postives = 78/186 (41.94%), Query Frame = 1
Query: 58 PDVLVLHRGLKVVVTKNVWQTKGIINATCGVVRD-WGDTIASIAAEIVEQDPTHKRPAWVEVELT--TGKGSGSTVKILPFEDRNVWVPYCRGVA-----VSGAYVAKQRPLMAAACITVHHVQGVGFERVAVWIPSRVFFAQGQGYTAISREKTLEGLFL--V*PDDPLQDREEAKSSSWMHFTL 585
P++L L G KV+VT+N+W KG++N G+V+ W +P PA V +E +G + I P WVP A A Q PL A IT+H QGV + + + + F A G + AISR KTL GL P L EE S ++ +
Sbjct: 184 PEIL-LAEGAKVMVTRNLWTAKGLVNGAQGIVKKIWYSA---------RTNPREHLPAVVFIECKGYSGPNNAGWEGIEPH-----WVPIVPVTARWEDRTGKALSRTQLPLALAWAITIHKSQGVTLDEATIELGPKDFQA-GLSFVAISRVKTLSGLVFRTAFPHSRLLRTEETASMQMLNLDI 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig638.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig638.1.1 >prot_P-littoralis_Contig638.1.1 ID=prot_P-littoralis_Contig638.1.1|Name=mRNA_P-littoralis_Contig638.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp KKLERDQGRHPIVLEYADLPDVLVLHRGLKVVVTKNVWQTKGIINATCGVback to top mRNA from alignment at P-littoralis_Contig638:2401..3471- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig638.1.1 ID=mRNA_P-littoralis_Contig638.1.1|Name=mRNA_P-littoralis_Contig638.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1071bp|location=Sequence derived from alignment at P-littoralis_Contig638:2401..3471- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig638:2401..3471- >mRNA_P-littoralis_Contig638.1.1 ID=mRNA_P-littoralis_Contig638.1.1|Name=mRNA_P-littoralis_Contig638.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=522bp|location=Sequence derived from alignment at P-littoralis_Contig638:2401..3471- (Pylaiella littoralis U1_48)back to top |