prot_P-littoralis_Contig636.38.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE) HSP 1 Score: 156 bits (395), Expect = 4.490e-37 Identity = 99/315 (31.43%), Postives = 158/315 (50.16%), Query Frame = 0
Query: 1 MRWIHLPLLVLAFCPSSMPTAAAVEGTQDATITGVQTEKELLPRSAGRGSRACEQHPGVLDMRLQCVMPGENSRSVYTPIGGCRMHLTIGDGQCGYRAVGGALIKSKGYARSKTVEDLKRLTQEAAIRHIMQGATPAXXXXXXXXXXTEEFGNRLISRDQLDRARSLRLSQIRDLWGELVDEVDPSERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 315
MR L LL + F SSM T A + + V +EL P + G R E G + ++C V TP+ G +H GDG+CG+ A+ L G AR+ + ++ A+ H++ GA E ++S+DQL RA S+++ + G++ + ++T W ++ E+ W+D+TW+ LA GVNI++WEPS ++ YS + G+FL++K+D+MDEEGDHW+HLLY + P+ AR +Q+ + NHF + LG DAV F+ ++S + Q
Sbjct: 1 MRPFFLVLLAI-FRTSSMNTPAVDSDSDHQVVFRVDKRQELAPPPSALGRRVQEHIGGPQALSMKCSTTLIQGGRVITPLAGAGVHTVEGDGKCGWNALRAGLQACLGRARTPNEQQMRAAVARRAMEHVV-GAPDVP-----------EDSTAVLSKDQLGRALSVKVPHVL---GDVEHGMAAEDKTVRWFCDLARQSAEK-WVDITWMSFLASEYGVNIMVWEPSAKHGTVQAYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQ 291
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.120e-20 Identity = 57/161 (35.40%), Postives = 94/161 (58.39%), Query Frame = 0
Query: 155 LISRDQLDRARSLRLSQIRDLWGELVDEVDPSERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 315
++S+ QL RA S+++ + G++ + ++T W + E+ W+DVTW+ LA GVNI++WEPS ++ Y + G+FL++K+D+MDEEGDHW+HLLY + P+ AR +Q+ + NHF + LG DA F+ ++S + Q
Sbjct: 53 VLSKRQLGRALSVKVPHVL---GDVEHGMAAEDKTVRWFCDLAWQSAEK-WVDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYLGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAAASFVDVVASAKLQ 202
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5KFV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV5_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.390e-20 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0
Query: 203 EDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSS 311
E W+DVTW+ LA GVNI++WEPS ++ YS + G+FL++K+D+MDEEGDHW+HLLY + P+ AR +Q+ + NHF + LG DAV F+ ++S
Sbjct: 325 EKWIDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVAS 426
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5KNV0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV0_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.930e-17 Identity = 94/307 (30.62%), Postives = 144/307 (46.91%), Query Frame = 0
Query: 211 LGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQQ---------------QEGGT---------------GPL-RGARKRTGTTQSRDKQ----KRKQPDQPPKGNGGTSKKPGLETPQPLDKPAKIEKG-------------------VKKRRARK----GGDDK--VVKEKDVCYDSDGNIGGGD--DFESAGAFACLTINPRKLTSDIGKIPEIAYKRAFLKSSQRKALGLKV 455
+ LLA GVNI+LWEPS ++ YS + G+ L++K+D+MDEEGDHW+HLLY + P+ AR +Q+ + NHF + LG DAV F+ ++S + Q + GG+ GPL RG+ ++ + +Q K K+ PK G T +PGL + + + G V K+++R GG + K GGGD ++ GAFA ++ N +KL + + KIPE YKRAF +++R+ALG+K+
Sbjct: 1 MSLLASEYGVNIILWEPSAKHGTVQAYSENNTAGMLLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGGEEEDHPEFSMGPLPRGSNSSRSSSGTEGRQAGARKTKKGKVGPKVVGST--RPGLRQGRSARRWLRRGSGXXXXXXXXXXXXXXXXMGEVPKKKSRLHRLVGGTPRRPTAKTTMPTMIPTAASGGGDVDHKQTPGAFATMSQNQKKLVTAMKKIPERGYKRAFWLTNKRRALGMKL 298
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5K2B4_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B4_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 9.180e-15 Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 0
Query: 187 ERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRI--YSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 315
E+T W + V+ W+D+TW+ LA GVNI +G RI YS + G+FL++K+D+MDEEGDHW+HLLY + P+ AR +Q+ + NHF + LG DAV F+ ++S + Q
Sbjct: 5 EKTVRWFCDLAWQSVK--WVDITWMSFLASEYGVNI-----TGCPSWSRIQTYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQ 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig636.38.1 ID=prot_P-littoralis_Contig636.38.1|Name=mRNA_P-littoralis_Contig636.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=502bpback to top |