mRNA_P-littoralis_Contig633.28.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig633.28.1
Unique NamemRNA_P-littoralis_Contig633.28.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 2.710e-244
Identity = 484/1014 (47.73%), Postives = 583/1014 (57.50%), Query Frame = 1
Query:   46 LLACQRSSAVPCTSSTLVAPTVVNDAAGALLLAQAVNCSEGVFDVSWVGSVTVEETIRVSDGTVLSVVGMPDDGSPSVNGAGEVSLFHVSGGTLSLSDLSLIDGFGEKGGAIYAEDSVLTSEGCTFSGNGXXXXXXXXXXXXXXXXXXXXXXXXXTAIDGGAISAFASRWDGTADSSVVALNSCTFSDNQVDVVEGEEFMSGRGGAISATSLVMTSDSSEFLSNNGRSGGAIWMYGSEFSTVNNTFSDNHATLDGGVIHADELNWTSDSCTLS-------------NNECGGAGGRFTGVITVPGSAVFEENYATLNGGGVSLIDSE---LQVLTGXXXXXXXXXXXXXXXXXXXTVSLISVEGQMTFTENSAXXXXXXXXXXXXG-LQIXXXXXXXXXXXXXXXXXSFLSVGQSI---DIATVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGAGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTI----RTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSAVAREVR 3015
            LLA +RS+AVPC SSTLVAP+VV D AGAL LA+AV+CS+G F+VSWVG+V VE+TIRV DGT LS+VG+PD GS +V+GAGEV LF V+ G L LS LSL++G    GG+I+A DSV++   C F+GN    XXXXXXXXXXXXXXXXXXXXX    DG                                                                                                                              + + GGA       + V G++VFE+N A  +GGGV L         V  G                   T S +S+EG         XXXXXXXXX      ++                 + +SVG +    + A + + SF +N A + GGAV+IAGGFV+    DF+GN          A+G A +D C  S N A +G AVS+VV+  + +++F DN L CDDD  FL W   S Y+IACD C  +EC  CT  NPD+  LCE    +T S T +GTLE+L+L  GYWRSS+ S +IR C    SC GG     AVGYDG  CA CAE Y+ G GYTCS+CD  RR WT   A++L   A V   + V  LGA  E +A   I    R RF RS  SQG KI+IVSWQIVSQF++VASVTYPD Y  FVG+ID +DLD+ W LS +CWV TNFY TLL  TI P+V+S LVL S+ IR R C A+D DR SR+  RHA  +YL+SFLVYSS SSTVFQTF CDDIDTGESFLR D+ IQC T EHR YM YA  MCLVYP GIP  Y   LY+AR+G KS+ E++R    VLR L  PY++ VYYYEVVECFRRVTLSG+V+FILPNTAGQVMT FLLS+ FFA F VLDPY    DTWLAR+GHAIVMMS+FVA+ VKVD   DDGFSQDVFAGALV  N  + L V  EA  +CS V +E+R
Sbjct:   14 LLAGRRSAAVPCASSTLVAPSVVEDTAGALGLAEAVDCSDGTFEVSWVGNVAVEQTIRVPDGTFLSIVGLPD-GSSTVDGAGEVGLFEVNRGALQLSGLSLVNGTSAVGGSIFASDSVVSVSECVFTGNAATQXXXXXXXXXXXXXXXXXXXXXVA--DGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADIGGAVFGSRSEVNVSGNSVFEDNIAGTSGGGVFLQSGSHLAFPVHDGGALFSGNRVEGAGAGVYVTTDSTVSLEGPTXXXXXXXXXXXXXXXXVAVNDFRVENATFSFNSAQANGGAMALVSVGTAEANGEYAQIRNSSFGENEAGNTGGAVYIAGGFVEFNRSDFEGN-TAGAGGALYAAGTAKLDDCVLSKNRAALGSAVSSVVSFVLQDSDFRDNALLCDDDRFFLDWTNVSAYDIACDQCD-LECEGCTIMNPDKALLCEDAFPNTDSLTADGTLESLNLAPGYWRSSNKSRDIRACPRATSCPGGTEGSCAVGYDGTLCAECAEDYSLGPGYTCSECDEDRRKWTTAAAVILXVAAAVAVTVSVGYLGAPTEESAAARIPSLVRERFGRSWVSQGFKIIIVSWQIVSQFASVASVTYPDLYATFVGFIDFLDLDVAWTLSVDCWVGTNFYVTLLTMTIGPVVVSVLVLGSWWIRTRHCPADDPDRFSRINQRHAKFIYLISFLVYSSVSSTVFQTFPCDDIDTGESFLRVDYRIQCSTAEHRGYMVYAGFMCLVYPIGIPVAYLFFLYKARKGFKSEEEAMRTDIAVLRPLWQPYRQSVYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAANVVLALIVAVEALWMCSDVVQEIR 1022          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 1.140e-118
Identity = 238/605 (39.34%), Postives = 341/605 (56.36%), Query Frame = 1
Query: 1231 GQSIDIATVSSCSFHDNGAVDA-GGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSP---YEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPF-----CAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAV-VVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAEC-WVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRS-RVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
            G  +  AT S C F DN A    GGAV    G  + + CDF+GN         L  G   V +CSF  N+A   G A++ V   ++S   F  N L+C+   L+     G P   +E  C  C   EC  C  +       CE  +EHTT+     TLETLD+  GYWR++S S +I  CY  D+C GG   A  + A GY GP      C+VC  G+   + +TC++C + RR   + VA++ A VAV  +  +    L   V+         R  R+   Q LKI++V WQI++QF+ VA++TYP AY+ F+  IDV++ DL   L+A C W D +F+D LL+ T+ PLV  G +++++ +  RR G   G   +   +H+H +AL L++FL+YSS SSTVFQTFAC+ +D G  +LR D++I C   +H+ +  YA +M +VYP GIP  YA  L+Q RR +  D  + +  A  +  L  PY+ + +YYEV+EC RR+ L+G+V FI PN A Q+  T L++  F   F V+ PYT   DTWL+R GH IV +SMF AL++KVD   +   SQDVFAG  V  +  ++L ++ E  G+C A
Sbjct:  436 GTELYPATFSGCKFFDNKASGGTGGAVETLSGRQEFISCDFEGNSAYVGGAMRLG-GTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAG-LYREDTEGEPSARFETVCLDCP--ECDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEGNAGCFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQ-RRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLA 1035          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 2.080e-111
Identity = 236/587 (40.20%), Postives = 334/587 (56.90%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGG---FVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGP--AVSNVVTI-DVSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIR-NRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATV--LRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
            T S C F  N A   GGAV  A G   F D V   F GN         LA G A++ +CSF  N +  G   AVSNV  I ++SNT F  N   C  DT FL +  G   + AC  C+   C  C    P  V LC  VI H+ S     TLETL +  GYWR+++ S E+  CY VD+CVGG   A +Y   GY+GP+CA+C++ Y+  +G+TCSKC    R   I +A  LA + +      V  +   V+      +    +R    Q LKI++V+WQIV+QF++ A+VTYPD Y+ F+  +DV + D+ W+LSA C +D +F+D LL++TI P++   L+ ++   R   R    +      V  RH + + L+ FLVYS  SS VFQTFACD ++ G  +LRAD+ I+C +++H+ +  YA  M L+YP GIP  Y A L + R  ++ D +   D   V  +  L  PY+  VYYYEV+EC RR+ L+G+VVFI PNTA Q+  T +++++F      L PY    DTW++R+ HA+V MS++VAL++KVD   + G SQ VF   LV  +  M+L V+ E
Sbjct:  415 TFSRCRFTFNRATATGGAVDSASGQDLFEDTV---FRGNQAVTGGALRLA-GRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDT-FLNYTSGDALDEACSGCQTT-CDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCP--NRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIM--ALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 2.050e-110
Identity = 227/587 (38.67%), Postives = 329/587 (56.05%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIG--PAVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISF----AIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA--LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
            T   C F  N A+  GGAV  A G    V   F+GN         LA G A V++CSF  N +  G   AVSN+  +  VSN  F  N   C +       + G+ YE  CD C PVEC  C+   P  V  C   +EH+ S     TL+ L ++ GYWR++  S  + ECY  D+C+GG   +  Y   GY+GP+CAVC+ GYT  +G  CSKC        +GV++ +A +   VA +     G S  RA     RT   R    Q +KIVIV+WQI++QF++VA++ +P  Y+ F+  +++ + DL W+LSA C  D +F+D LL++TI P+V  GL+ ++     A RN    +ED     RV H+H + + L++FLVY+S S+ +FQTFAC+++D  +++LRAD+ I+C + +H  +  YA  M ++Y  GIP  Y   L++    ++ D       A +     L  PY+  V+YYEV+EC RRV L+G+VVFI PNTA Q+    L++++F      L PY    DTWL R+GHA+V +SM+VAL++KVD   +   SQ VF   LV  +  MV  V+ E
Sbjct:  372 TFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLA-GTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGC-PVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTG--RFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIV--GLLFLAAVYAAAARNSHRSSED---LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLE 949          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 3.430e-110
Identity = 229/585 (39.15%), Postives = 332/585 (56.75%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGP--AVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCL-GASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATV--LRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEA 2979
            T  +C F  N A+  GGA+  A G        F+GN         LA G A + +CSF  N +  G   AVSN+  I  ++N  F  N   C   T          +E  C+ C    C  C  +      +C  V++H+TS   N TL+TL + RG+WR+S+ S E+  CY  D+C+GG   A  Y   GY+GP+C +C++GYT  + + CSKC        I VA+VLA + V +A   V  +    V    +  I     R    Q LKIVIVSWQI++QF++VA+VTYPD Y+  +  +DV + DL W+LSA C VD NF+  LL++TI P+V   L+  ++A    R    + ++ + + ++H T + L++F VYSS SST+F+ FACDD+D  + +LRAD+SI+C ++EHR    YA  M ++Y  GIP  YA  L+++R  +K +     +   V  +  L  PY+  V+YYEV+ECFRRV L+G+VVFI PNTA Q+  T L++  F      L PY    DTW++R+GH +V +SM+VAL++KVD   +   SQ+VF   LV V+  M+L V+ EA
Sbjct:  905 TFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLA-GEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETT-CDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGG-IAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAA-ARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 1.060e-109
Identity = 226/583 (38.77%), Postives = 345/583 (59.18%), Query Frame = 1
Query: 1264 CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTE-FGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTS--NPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGAGDYRAV---GYDGPFCAVCAEGYTRGVGYTCSKC--DAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA---LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
            C F DN A   GGA+  A G+  A+   F+ N         L  G A + +C+F  N A   GPAVSN+  +D+  T  F  N L C++  ++L    G  Y+  CD C PV  S    S  N D V +C   ++HT S   + T+ETL+L  GYWR+++ S  +  CY  D+CVGG  +  A    GY+GP+C+VC+EGY+  + +TC++C  D G     + V + +   A+   AL +  +   +E A R  I  R  +    Q +KIV+V WQI++QFS+VA+VTYPD Y+ F+  +++++ D++W+ SA C V+ +F+  LL+ TI PLV   L+ I++ +  RR    +   + +++H+H + + L++FLVYSS S+TVFQ+FAC+D+D  + +LRAD+ I+C ++EH+ +  +A +M LVYP GIP  Y   LY+ RR +KS+    R  +  ++    L  PY+   +YYEV+EC RR++L+G+VVFI PNTA QV  T +++  F    +VL PY    D  ++ +GH IV  SM+ AL+ KVD   +   SQ+VFAG LV  +  MV+ V+ E
Sbjct: 1174 CLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLG-GSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENG-MYLDSVDGDRYQTVCDGC-PVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAI---ALCMHLVSGEMEGARRGVIH-RVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQ-KIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVE 1748          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 9.440e-109
Identity = 261/781 (33.42%), Postives = 389/781 (49.81%), Query Frame = 1
Query:  730 GGAIWMYGSE--FSTVNNTFSDNHATLDGGVIHADELNWTSDSCTLSNN-ECGGAGGRFTGVITVPGSAVFEENYATLNGGGVSLIDSELQVLTGXXXXXXXXXXXXXXXXXXXTVSLISVEGQMTFTENSAXXXXXXXXXXXXGL-QIXXXXXXXXXXXXXXXXXSFLSVGQSIDIATVSS----CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQI----GSPYEIACDAC-RPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGA---SVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTN--FYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRV---KHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
            GGA++++ SE  +S  N TF+ N A  DGG ++A          TL +  EC  +GGR T          F  N A    GG   +   + + +                      S++++ G +TFT NSA               Q                  +    G   ++  V +    C F  N A + GG V  A G  + V   F  N+        L  G   VD C+F  N+A   G A++ V  +++S+T F  NT +C         +        Y+  C  C    EC +C+         C   +++T S     +LETL + RGYWR+S+ S+ I  CY  ++C+GG     +    GY GP+CAVC  GY   + +TC++C + RR+  +    V AA+AVV          A   S E + +  +  R       Q  KI+IV WQI++QF++ A++++PD Y+ F+  +DV++ DL  ++++ CW D N  F+D LL++T+ PL++ G +  ++A+  RR  +  G  ++ V   +H+H +A  LV+FLVYSS S+TVFQ FACD +D G ++LRAD+ I C + +H     YA  M  +YP GIP  YA  L+  RR +  D  + +  A     L  PY+ + +YYEV+EC RRV L+G+VVFI PNTA QV  T L++  F   + +L PY    D WL+R GH IV +SMF  L++KVD   +   SQ VFAG +V  +C M L VI EA G+C A
Sbjct:  404 GGAMFVWASEVLWSAGNTTFAHNLAYDDGGALYA----------TLDHRIEC--SGGRTT----------FWNNTAAAGDGGALGLYGSMALSS----------------------SVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTGNGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLG-GKTNVDGCAFVANSASSRGLAIAAVGFVNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFV----VAAAIAVVXXXXXXXXXCAHLISGEVSEQSCLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHH-RRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYA 1134          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 4.860e-106
Identity = 224/597 (37.52%), Postives = 321/597 (53.77%), Query Frame = 1
Query: 1249 ATVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSP---YEIACDACRPV-ECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRC-----LGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAEC-WVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAE-DGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
            +T+S C+F DN A +AGGAV    GF +   C F+GN         L                     AV  V +  + ++ F  N L C         +   P   +E  C  C    EC  C  ++      CE  +EHT++     TLETL L  GYWR+++ S+ I  CY  D+C GG   A  + A GY GP+CAVC   Y+  + +TC  C + RR        V+AA+AV+V  L         L    E       R R   +   + LKI++V WQI++QF+  A+VT+P  Y+ F+  IDVI+ D+  +L+A C W D +F+D LL+ TI PLV++G + +++ I  RR  A  D     ++ H+H TAL  ++F+VYSS SSTVFQTFAC+ +D    +LRAD+ I C   +H+ +  YA +M +VYP GIP  YA  L+Q RR + +D  + +  A  +  L  PY+ + +YYEVVEC RRV L+G+VVFI PN A Q+  T L++  F   F +L PY    D WL+R GH IV +SMF  L++KVD  G+   SQ +F+   V  +  M+L ++ E  G+C A
Sbjct: 1029 STISGCNFSDNVAEEAGGAVKTLAGFQNIFSCHFEGNSADVGGAMRLGGEATXXXXXXXXXXXXXXXLAVDVVESASIHDSTFNGNQLSCGKGWFRSDTEQEDPNARFETVCVDCPAWDECFECIIADGTITPTCEVPLEHTSADEDGLTLETLKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLT----VIAAIAVIVTVLAFAAVFQYMLSTEHEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQ-RRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYA 1620          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 1.380e-105
Identity = 224/594 (37.71%), Postives = 326/594 (54.88%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI---GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQI-GSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGA---GDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKS-DVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSAVARE 3009
            T + C F DN A  +GGA+  + G       DF  N         LA    ++  C+F GN A     GPAVSNV  +DV N+ F  N + C   +    ++  G  YE  CD C P      T    + V  C   +E+T S   N ++E + +  GYWR+++ +  +  CY  D+C+GG      Y   GY GP+CA+C E Y R + + C+KC +G     +GV  V +A+AV  AAL    +    E      +    +   + + LKIV+V WQI++QFS VA+VTYP  Y+ F+  IDV++ D+ W++SA C VD +F+D LL  TI P+++ G++  ++A  + R    D +  +RV  +H +A+ LV+FLVYSS SSTVF+ F CD +    S+LRAD+SIQC +T+HR    +AV M L+YP GIP  Y   LY  R  +K         +A  + AL  PY    YY EVVEC RR+ L+G+VVFI PN+A Q+  + L++  F     VL P+    D W++R GH ++ ++MFVAL++KVD   +   SQ +FAG LV+ N  +    +AE   +  AV  E
Sbjct:  437 TFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSFVDYYESEGGRYEAVCDGC-PAADDGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGE-GVAVGVIFV-SALAVGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSD-EAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKME 1026          
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 5.480e-104
Identity = 225/586 (38.40%), Postives = 325/586 (55.46%), Query Frame = 1
Query: 1264 CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSF---SGNNAPIGPAVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQI--GSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGA---GDYRAVGYDGPFCAVCAEGYTRGVGYTCSKC--DAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA--LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAF 2982
            C F DN A  +GGAV  A G    V   F GN         LA              SG     G AVSN+  +  ++N+ F  N   C  D LFL +       +E  CD CR V C  C+   P  V  C  V++H TS     TLETL +  GYWR++S S EI  CY  D+C+GG      Y    Y+GP+C++C++GY   +GY+CSKC   +G   + +G+A++   VAVVV  +     G + ER  R  +  R       Q +KIVIVSWQI++QF++ A+V YP  Y+ F+  + V   DL W++SA C +D  F+  LL  TI P+    L+  ++A   R    E  ++   +  +H     L++FLVYSS SST+F+TFACD+++ G+++LR D+ I+C +++H+V+  YA  M L+YP GIP  Y+  L++ R  +K D     D A V     L  PY+  V+YYEV+EC RR+ L+GIVVFI PNTA Q+  T +++  F      + PY+   +TW+ R+GH +V +SM+VAL++KVD   +   SQ VF   LV V+  M+L+V+ E F
Sbjct:  825 CRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQE--GAAVSNIGLVSTMANSSFTGNGFTCGPD-LFLEYDATDNGTFEAVCDGCR-VACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVV--IMYIMSGEAGER--RMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATR-INREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETF 1401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNY1_ECTSI2.710e-24447.73Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5J7J9_9PHAE1.140e-11839.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI2.080e-11140.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2Z8_ECTSI2.050e-11038.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE3.430e-11039.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY65_9PHAE1.060e-10938.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT9_9PHAE9.440e-10933.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3S0_ECTSI4.860e-10637.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV1_ECTSI1.380e-10537.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2X5_ECTSI5.480e-10438.40Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig633contigP-littoralis_Contig633:118071..122801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LNY1
PFAMsBeta_helix,Chlam_PMP
Model size3015
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons6
Evalue4.44e-245
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size3015
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig633.28.1prot_P-littoralis_Contig633.28.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig633 118071..122801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791321.3401017-CDS-P-littoralis_Contig633:118070..1190061680791321.3401017-CDS-P-littoralis_Contig633:118070..119006Pylaiella littoralis U1_48CDSP-littoralis_Contig633 118071..119006 -
1680791321.3535297-CDS-P-littoralis_Contig633:119324..1195841680791321.3535297-CDS-P-littoralis_Contig633:119324..119584Pylaiella littoralis U1_48CDSP-littoralis_Contig633 119325..119584 -
1680791321.3628907-CDS-P-littoralis_Contig633:119903..1201711680791321.3628907-CDS-P-littoralis_Contig633:119903..120171Pylaiella littoralis U1_48CDSP-littoralis_Contig633 119904..120171 -
1680791321.3742518-CDS-P-littoralis_Contig633:120728..1209131680791321.3742518-CDS-P-littoralis_Contig633:120728..120913Pylaiella littoralis U1_48CDSP-littoralis_Contig633 120729..120913 -
1680791321.3878303-CDS-P-littoralis_Contig633:121337..1218011680791321.3878303-CDS-P-littoralis_Contig633:121337..121801Pylaiella littoralis U1_48CDSP-littoralis_Contig633 121338..121801 -
1680791321.4008305-CDS-P-littoralis_Contig633:121899..1228011680791321.4008305-CDS-P-littoralis_Contig633:121899..122801Pylaiella littoralis U1_48CDSP-littoralis_Contig633 121900..122801 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig633.28.1

>prot_P-littoralis_Contig633.28.1 ID=prot_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1005bp
MKPIFPLLPVGGLVTLLACQRSSAVPCTSSTLVAPTVVNDAAGALLLAQA
VNCSEGVFDVSWVGSVTVEETIRVSDGTVLSVVGMPDDGSPSVNGAGEVS
LFHVSGGTLSLSDLSLIDGFGEKGGAIYAEDSVLTSEGCTFSGNGVGSSG
GAVYSDHSNMTFDHCVFSGNTAIDGGAISAFASRWDGTADSSVVALNSCT
FSDNQVDVVEGEEFMSGRGGAISATSLVMTSDSSEFLSNNGRSGGAIWMY
GSEFSTVNNTFSDNHATLDGGVIHADELNWTSDSCTLSNNECGGAGGRFT
GVITVPGSAVFEENYATLNGGGVSLIDSELQVLTGGSVVFTNNRADGAGG
GVSLTVSLISVEGQMTFTENSAGSGGGMYVTGNSGLQIDGILFSANSANT
TGGAISFLSVGQSIDIATVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDF
DGNFADRAGGALLASGVATVDSCSFSGNNAPIGPAVSNVVTIDVSNTEFG
DNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPV
IEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGAGDYRA
VGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAA
LGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASV
TYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISG
LVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQT
FACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAA
TLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSG
IVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVM
MSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSAV
AREVR
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mRNA from alignment at P-littoralis_Contig633:118071..122801-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig633.28.1 ID=mRNA_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4731bp|location=Sequence derived from alignment at P-littoralis_Contig633:118071..122801- (Pylaiella littoralis U1_48)
ATGAAGCCCATTTTCCCCCTTTTGCCAGTCGGGGGCCTGGTCACTCTACT CGCCTGCCAGAGGTCAAGCGCTGTACCATGCACGTCTTCAACGCTTGTCG CGCCGACGGTGGTCAATGACGCGGCTGGGGCGCTATTGTTGGCTCAGGCG GTAAACTGCTCGGAGGGGGTGTTCGACGTCAGTTGGGTCGGATCTGTCAC GGTGGAAGAGACCATCCGCGTGTCCGATGGCACGGTCCTGTCCGTTGTGG GCATGCCTGACGACGGATCGCCCTCCGTGAATGGCGCGGGCGAGGTCTCG CTTTTCCACGTGAGCGGCGGCACCTTATCGTTGTCGGACCTGTCTTTGAT CGACGGCTTTGGCGAGAAAGGAGGCGCCATCTACGCGGAGGACTCGGTGC TTACGTCAGAGGGGTGCACCTTCTCGGGCAACGGCGTGGGTAGCAGCGGG GGGGCAGTCTACTCGGATCACTCGAATATGACGTTTGATCACTGTGTCTT CTCGGGCAATACAGCGATTGACGGAGGCGCTATTAGCGCATTCGCTTCCC GTTGGGACGGCACGGCAGATTCGTCCGTTGTAGCACTCAATAGTTGTACG TTTTCGGACAATCAAGTTGACGTCGTGGAAGGGGAAGAATTCATGTCGGG CAGGGGGGGTGCAATCTCCGCCACGAGCTTGGTGATGACGTCAGACAGCA GCGAATTCTTGAGCAACAACGGCAGGTCCGGAGGGGCGATCTGGATGTAC GGCTCAGAGTTTTCAACGGTAAATAACACATTCTCGGACAACCACGCCAC ACTCGATGGTGGTGTCATCCACGCGGACGAGTTGAACTGGACGTCAGACA GCTGCACGTTATCAAACAACGAGTGCGGCGGCGCTGGAGGGCGATTCACG GGGTGGTCTATCTGAGTATGTCGTTGTCCGGCAGCTCAATATTTCGAGCC AACCGAGCAGGAACTCACGGTGGCGTCATCTCAGTACCAGGAGGGTCCAG TGTCATCACCGTGCCCGGCAGTGCTGTGTTCGAAGAAAACTATGCAACCT TGAATGGGGGGGGGGTGTCTCTGATCGATTCCGAGCTTCAAGTTCTCACC GGCGGTAGCGTGGTATTCACAAACAACCGCGCGGATGGTGCTGGAGGAGG CGTCAGTTTGACCGTTTCGTTAATTTCTGTCGAAGGTCAGATGACGTTCA CAGAGAACAGCGCAGGCAGTGGCGGAGGCATGTACGTCACGGGGAACTCG GGACTCCAGATTGACGGTATCTTGTTCTCGGCGAACTCCGCGAACACTAC GGGGGGGGCGATTTCGTTTCTTTCCGTTGGACAGTCGATCGACATTGCCA CGGTATCAAGTTGCTCGTTCCACGACAACGGCGCTGTTGACGCGGGTGGA GCTGTTTTCATAGCGGGAGGGTTCGTAGATGCGGTCGGCTGCGACTTCGA CGGAAACTTTGCAGGTGAGTAAGCAAGCCAAAACTTGAATGCACTCAGCA GCATGTAAGGAACCGGTACGAAGCGCTTTTGGTTGAGGGTTGTTCTTCAC AATGCAGGGTGGGTTTCCCTTGCACTTCTCGCGTATCCAACTCTTTGGGT GCCTGATCGGAACCACATGGTGTGTCCGGGATTCGTTCTTCGCAAGGCAC TGGTCGAGCGATACTCTCTGAAATTTGCCACGTGCTCCCTTGTAGGTGCC CTTGACGAGAGACATGGGTCTATAAAGCCGGTGTGTCGCTTCGAACGATC GATGACAGTTGGGTTGGTAGTGCTCGGAGAGACGAGGATGAGCGTACTTG TTCGTTGGAAGCACAAACGCTCACAACGCCTTCCGAAACCCTCGCCCTCC TGCGTGACGTTATTTGCTCCTCTCTTGTTTGGACTCAGACCGTGCAGGGG GCGCACTTCTTGCGTCCGGCGTAGCAACGGTAGATAGCTGCAGCTTTAGC GGTAACAACGCTCCGATTGGTCCAGCTGTATCAAATGTGGTGACTATCGA CGTCAGCAACACCGAGTTCGGCGACAACACGCTCTGGTGCGACGACGACA CCTTATTTCTGGCCTGGCAAATCGTAAGTGATGCACAATGAAGCCGAGTG TAATATTTTCATGTTGAATCGCGAGCCAGCTTTGGGTGCGCTCCTTCTGG CAATCCGCCGTTCACCGTGTAACCCCCCCCCGGCGCCCTTACGAACACGA AATGCGCCTGCCTGTGGTCTTCCTTGCTTGGTGACTGTGGTGTTGTTTCT CTGATGCTTATTTTGGAAGGACGCGGTTCGTGCTCCTGTCTCGGTGGTTG TTGCACACCCAAATAGCTGTGTGCATACAATGATCCACGGAATACACTTA ATCGGCGGTCACTGACAAAATTCCGAACATTTTGCGAGCACTTCCAGATT TCGCACGTGCTTCGTTCCTTCCACTGCCTGTGCCGAGAATCCGAAATTCC TGGCCTCAATCTGATCCCATTCTTCGAAACATTCTCAGAAGTAGAATCGA CAGTTTTATTCTTTCCGCAAGGTTGGAAATACCACGGCGTTCGAAACAAC GCCACGGGCTAGAACTCCTTGAAGCGAGCGTCAAAGCTCCCACCTAACTT CAAGCTAACACGAACCTAACCTTGTTGCAGGGCTCTCCGTACGAGATTGC ATGCGACGCATGCCGGCCCGTCGAGTGCAGCACCTGTACCACGTCGAACC CCGACGAAGTCCAGCTGTGCGAACCTGTCATAGAACACACCACAAGCCCT ACACGCAACGGGACGCTGGAAACACTGGATCTACAGCGGGGGTACTGGCG AAGCTCTAGCATGAGCATTGAAATTCGAGAATGCTACGAGGTGGACTCGT GCGTGGGTGGCGCTGGTGATTATCGCGCTGTAGGGTACGATGGACCATGT GAGTAAAGCTTGACATAACGAATATCGACGTCCCGTGTCGGAGCTAATTA GGAAGTGAGGAGGCAAAAAGAGTTTTGATGCAGCGACGCAGTCCAGAGGT CGAACAACACTTTCATTTGTGCGATTCTTATCCTTTGTACCCCGATACCG TGTCGGAATGCTGGTTCGAGGGCGCCATGTCGGCGTGGAAAGCTTTGAGC CTAGCCATGGAGGTGTTTCACTCGCTCGATTGTTCCGCTTCGAAAAACCT CCCTCATCGACTGCTCGTAGCGTGATCTGTTCGTCGTCGCTCGCCGGTTT CTGTTCCCCATTCACAGTCTGCGCGGTGTGTGCCGAGGGCTACACGCGGG GGGTGGGGTACACCTGCTCCAAGTGCGACGCAGGTCGCCGAGACTGGACG ATTGGGGTTGCGTTGGTTCTGGCTGCCGTCGCTGTGGTGGTTGCGGCGTT GGGCGTGAGGTGTTTGGGTGCGTCTGTCGAACGGGCCGCACGCTGGACGA TCCGAACTCGTTTCGAGCGCTCGACTGCTTCCCAGGGGCTCAAGATCGTC ATCGTGTCTTGGCAAATCGTTTCCCAGGTGACGGGTTTCCCTGAAGTAGA AAATACTGACGGATGAGGCGTCCTGATGGTGCGCATGTTCAAAGACGCGA AATGCATTGTACAGTAGAGTGTCGGGCGAGCGGGCTCGCGAATATCTTGA TGCACGAAGGCTGGTAGGTTGCCTTCTTTGCTGCAGTGCCTGCCGCGGAA AGAGCATAAATCTGCCTGGAATTTTTGGCGGGAATACCCAAGCGCGTTAC AATGTCCGCCTTTCGGCGTCCATATTTAGCGCTCAGCCAGCGTGCTGACA TTAACATTTGAGCTCGTCTCTTGTCTGCTGCTTCTTCTTTTTCAGTTTTC CGCGGTTGCCAGTGTAACGTATCCGGACGCGTACGAGGCCTTCGTTGGAT ATATCGACGTTATTGACCTGGACCTGGTCTGGATGCTGTCGGCGGAGTGT TGGGTGGACACCAACTTCTACGACACCTTATTGATCACTACTATCGTGCC CTTGGTGATTTCTGGTCTGGTACTAATTTCGTTTGCAATCAGGAATCGCC GGTGCGGTGCAGAGGATGGAGACCGGCGCTCCCGCGTCAAGCATAGGCAC GCCACGGCCCTGTACCTCGTGTCCTTTCTGGTCTACTCTTCGGCGTCGTC TACCGTTTTTCAAACGTTCGCCTGCGACGATATCGACACAGGGGAGTCGT TTCTTCGAGCTGATCACAGCATCCAGTGCTACACCACGGAGCATCGAGTG TACATGGCATACGCGGTGCTCATGTGCTTGGTGTATCCGTTTGGGATCCC CTTCTGCTACGCAGCCACGCTCTACCAGGCTCGACGTGGCATCAAGTCCG ACGTGGAGTCCATAAGGGACAAGGCGACCGTGCTCAGAGCGCTGCACGCG CCATACCAGCGGGATGTGTACTACTACGAGGTCGTGGAGTGCTTTCGTAG AGTTACGCTTTCGGGCATTGTTGTGTTCATCCTGCCGAACACTGCCGGGC AGGTGATGACGACATTCTTACTGTCACTACTTTTCTTTGCGGCCTTCATG GTGCTGGATCCGTACACCGACGGTCTGGACACATGGCTAGCAAGACTCGG CCACGCGATTGTCATGATGAGTATGTTCGTGGCCTTGGTGGTGAAGGTGG ACACCGAGGGCGACGACGGATTCAGTCAGGACGTATTTGCGGGGGCTCTT GTGTTGGTAAACTGCGCGATGGTTCTGACAGTGATAGCGGAAGCGTTTGG ATTGTGCTCGGCCGTCGCCCGGGAGGTTCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig633:118071..122801-

>mRNA_P-littoralis_Contig633.28.1 ID=mRNA_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3015bp|location=Sequence derived from alignment at P-littoralis_Contig633:118071..122801- (Pylaiella littoralis U1_48)
ATGAAGCCCATTTTCCCCCTTTTGCCAGTCGGGGGCCTGGTCACTCTACT
CGCCTGCCAGAGGTCAAGCGCTGTACCATGCACGTCTTCAACGCTTGTCG
CGCCGACGGTGGTCAATGACGCGGCTGGGGCGCTATTGTTGGCTCAGGCG
GTAAACTGCTCGGAGGGGGTGTTCGACGTCAGTTGGGTCGGATCTGTCAC
GGTGGAAGAGACCATCCGCGTGTCCGATGGCACGGTCCTGTCCGTTGTGG
GCATGCCTGACGACGGATCGCCCTCCGTGAATGGCGCGGGCGAGGTCTCG
CTTTTCCACGTGAGCGGCGGCACCTTATCGTTGTCGGACCTGTCTTTGAT
CGACGGCTTTGGCGAGAAAGGAGGCGCCATCTACGCGGAGGACTCGGTGC
TTACGTCAGAGGGGTGCACCTTCTCGGGCAACGGCGTGGGTAGCAGCGGG
GGGGCAGTCTACTCGGATCACTCGAATATGACGTTTGATCACTGTGTCTT
CTCGGGCAATACAGCGATTGACGGAGGCGCTATTAGCGCATTCGCTTCCC
GTTGGGACGGCACGGCAGATTCGTCCGTTGTAGCACTCAATAGTTGTACG
TTTTCGGACAATCAAGTTGACGTCGTGGAAGGGGAAGAATTCATGTCGGG
CAGGGGGGGTGCAATCTCCGCCACGAGCTTGGTGATGACGTCAGACAGCA
GCGAATTCTTGAGCAACAACGGCAGGTCCGGAGGGGCGATCTGGATGTAC
GGCTCAGAGTTTTCAACGGTAAATAACACATTCTCGGACAACCACGCCAC
ACTCGATGGTGGTGTCATCCACGCGGACGAGTTGAACTGGACGTCAGACA
GCTGCACGTTATCAAACAACGAGTGCGGCGGCGCTGGAGGGCGATTCACG
GGTGTCATCACCGTGCCCGGCAGTGCTGTGTTCGAAGAAAACTATGCAAC
CTTGAATGGGGGGGGGGTGTCTCTGATCGATTCCGAGCTTCAAGTTCTCA
CCGGCGGTAGCGTGGTATTCACAAACAACCGCGCGGATGGTGCTGGAGGA
GGCGTCAGTTTGACCGTTTCGTTAATTTCTGTCGAAGGTCAGATGACGTT
CACAGAGAACAGCGCAGGCAGTGGCGGAGGCATGTACGTCACGGGGAACT
CGGGACTCCAGATTGACGGTATCTTGTTCTCGGCGAACTCCGCGAACACT
ACGGGGGGGGCGATTTCGTTTCTTTCCGTTGGACAGTCGATCGACATTGC
CACGGTATCAAGTTGCTCGTTCCACGACAACGGCGCTGTTGACGCGGGTG
GAGCTGTTTTCATAGCGGGAGGGTTCGTAGATGCGGTCGGCTGCGACTTC
GACGGAAACTTTGCAGACCGTGCAGGGGGCGCACTTCTTGCGTCCGGCGT
AGCAACGGTAGATAGCTGCAGCTTTAGCGGTAACAACGCTCCGATTGGTC
CAGCTGTATCAAATGTGGTGACTATCGACGTCAGCAACACCGAGTTCGGC
GACAACACGCTCTGGTGCGACGACGACACCTTATTTCTGGCCTGGCAAAT
CGGCTCTCCGTACGAGATTGCATGCGACGCATGCCGGCCCGTCGAGTGCA
GCACCTGTACCACGTCGAACCCCGACGAAGTCCAGCTGTGCGAACCTGTC
ATAGAACACACCACAAGCCCTACACGCAACGGGACGCTGGAAACACTGGA
TCTACAGCGGGGGTACTGGCGAAGCTCTAGCATGAGCATTGAAATTCGAG
AATGCTACGAGGTGGACTCGTGCGTGGGTGGCGCTGGTGATTATCGCGCT
GTAGGGTACGATGGACCATTCTGCGCGGTGTGTGCCGAGGGCTACACGCG
GGGGGTGGGGTACACCTGCTCCAAGTGCGACGCAGGTCGCCGAGACTGGA
CGATTGGGGTTGCGTTGGTTCTGGCTGCCGTCGCTGTGGTGGTTGCGGCG
TTGGGCGTGAGGTGTTTGGGTGCGTCTGTCGAACGGGCCGCACGCTGGAC
GATCCGAACTCGTTTCGAGCGCTCGACTGCTTCCCAGGGGCTCAAGATCG
TCATCGTGTCTTGGCAAATCGTTTCCCAGTTTTCCGCGGTTGCCAGTGTA
ACGTATCCGGACGCGTACGAGGCCTTCGTTGGATATATCGACGTTATTGA
CCTGGACCTGGTCTGGATGCTGTCGGCGGAGTGTTGGGTGGACACCAACT
TCTACGACACCTTATTGATCACTACTATCGTGCCCTTGGTGATTTCTGGT
CTGGTACTAATTTCGTTTGCAATCAGGAATCGCCGGTGCGGTGCAGAGGA
TGGAGACCGGCGCTCCCGCGTCAAGCATAGGCACGCCACGGCCCTGTACC
TCGTGTCCTTTCTGGTCTACTCTTCGGCGTCGTCTACCGTTTTTCAAACG
TTCGCCTGCGACGATATCGACACAGGGGAGTCGTTTCTTCGAGCTGATCA
CAGCATCCAGTGCTACACCACGGAGCATCGAGTGTACATGGCATACGCGG
TGCTCATGTGCTTGGTGTATCCGTTTGGGATCCCCTTCTGCTACGCAGCC
ACGCTCTACCAGGCTCGACGTGGCATCAAGTCCGACGTGGAGTCCATAAG
GGACAAGGCGACCGTGCTCAGAGCGCTGCACGCGCCATACCAGCGGGATG
TGTACTACTACGAGGTCGTGGAGTGCTTTCGTAGAGTTACGCTTTCGGGC
ATTGTTGTGTTCATCCTGCCGAACACTGCCGGGCAGGTGATGACGACATT
CTTACTGTCACTACTTTTCTTTGCGGCCTTCATGGTGCTGGATCCGTACA
CCGACGGTCTGGACACATGGCTAGCAAGACTCGGCCACGCGATTGTCATG
ATGAGTATGTTCGTGGCCTTGGTGGTGAAGGTGGACACCGAGGGCGACGA
CGGATTCAGTCAGGACGTATTTGCGGGGGCTCTTGTGTTGGTAAACTGCG
CGATGGTTCTGACAGTGATAGCGGAAGCGTTTGGATTGTGCTCGGCCGTC
GCCCGGGAGGTTCGA
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