mRNA_P-littoralis_Contig633.28.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI) HSP 1 Score: 726 bits (1873), Expect = 2.710e-244 Identity = 484/1014 (47.73%), Postives = 583/1014 (57.50%), Query Frame = 1
Query: 46 LLACQRSSAVPCTSSTLVAPTVVNDAAGALLLAQAVNCSEGVFDVSWVGSVTVEETIRVSDGTVLSVVGMPDDGSPSVNGAGEVSLFHVSGGTLSLSDLSLIDGFGEKGGAIYAEDSVLTSEGCTFSGNGXXXXXXXXXXXXXXXXXXXXXXXXXTAIDGGAISAFASRWDGTADSSVVALNSCTFSDNQVDVVEGEEFMSGRGGAISATSLVMTSDSSEFLSNNGRSGGAIWMYGSEFSTVNNTFSDNHATLDGGVIHADELNWTSDSCTLS-------------NNECGGAGGRFTGVITVPGSAVFEENYATLNGGGVSLIDSE---LQVLTGXXXXXXXXXXXXXXXXXXXTVSLISVEGQMTFTENSAXXXXXXXXXXXXG-LQIXXXXXXXXXXXXXXXXXSFLSVGQSI---DIATVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGAGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTI----RTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSAVAREVR 3015
LLA +RS+AVPC SSTLVAP+VV D AGAL LA+AV+CS+G F+VSWVG+V VE+TIRV DGT LS+VG+PD GS +V+GAGEV LF V+ G L LS LSL++G GG+I+A DSV++ C F+GN XXXXXXXXXXXXXXXXXXXXX DG + + GGA + V G++VFE+N A +GGGV L V G T S +S+EG XXXXXXXXX ++ + +SVG + + A + + SF +N A + GGAV+IAGGFV+ DF+GN A+G A +D C S N A +G AVS+VV+ + +++F DN L CDDD FL W S Y+IACD C +EC CT NPD+ LCE +T S T +GTLE+L+L GYWRSS+ S +IR C SC GG AVGYDG CA CAE Y+ G GYTCS+CD RR WT A++L A V + V LGA E +A I R RF RS SQG KI+IVSWQIVSQF++VASVTYPD Y FVG+ID +DLD+ W LS +CWV TNFY TLL TI P+V+S LVL S+ IR R C A+D DR SR+ RHA +YL+SFLVYSS SSTVFQTF CDDIDTGESFLR D+ IQC T EHR YM YA MCLVYP GIP Y LY+AR+G KS+ E++R VLR L PY++ VYYYEVVECFRRVTLSG+V+FILPNTAGQVMT FLLS+ FFA F VLDPY DTWLAR+GHAIVMMS+FVA+ VKVD DDGFSQDVFAGALV N + L V EA +CS V +E+R
Sbjct: 14 LLAGRRSAAVPCASSTLVAPSVVEDTAGALGLAEAVDCSDGTFEVSWVGNVAVEQTIRVPDGTFLSIVGLPD-GSSTVDGAGEVGLFEVNRGALQLSGLSLVNGTSAVGGSIFASDSVVSVSECVFTGNAATQXXXXXXXXXXXXXXXXXXXXXVA--DGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADIGGAVFGSRSEVNVSGNSVFEDNIAGTSGGGVFLQSGSHLAFPVHDGGALFSGNRVEGAGAGVYVTTDSTVSLEGPTXXXXXXXXXXXXXXXXVAVNDFRVENATFSFNSAQANGGAMALVSVGTAEANGEYAQIRNSSFGENEAGNTGGAVYIAGGFVEFNRSDFEGN-TAGAGGALYAAGTAKLDDCVLSKNRAALGSAVSSVVSFVLQDSDFRDNALLCDDDRFFLDWTNVSAYDIACDQCD-LECEGCTIMNPDKALLCEDAFPNTDSLTADGTLESLNLAPGYWRSSNKSRDIRACPRATSCPGGTEGSCAVGYDGTLCAECAEDYSLGPGYTCSECDEDRRKWTTAAAVILXVAAAVAVTVSVGYLGAPTEESAAARIPSLVRERFGRSWVSQGFKIIIVSWQIVSQFASVASVTYPDLYATFVGFIDFLDLDVAWTLSVDCWVGTNFYVTLLTMTIGPVVVSVLVLGSWWIRTRHCPADDPDRFSRINQRHAKFIYLISFLVYSSVSSTVFQTFPCDDIDTGESFLRVDYRIQCSTAEHRGYMVYAGFMCLVYPIGIPVAYLFFLYKARKGFKSEEEAMRTDIAVLRPLWQPYRQSVYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAANVVLALIVAVEALWMCSDVVQEIR 1022
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.140e-118 Identity = 238/605 (39.34%), Postives = 341/605 (56.36%), Query Frame = 1
Query: 1231 GQSIDIATVSSCSFHDNGAVDA-GGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSP---YEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPF-----CAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAV-VVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAEC-WVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRS-RVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
G + AT S C F DN A GGAV G + + CDF+GN L G V +CSF N+A G A++ V ++S F N L+C+ L+ G P +E C C EC C + CE +EHTT+ TLETLD+ GYWR++S S +I CY D+C GG A + A GY GP C+VC G+ + +TC++C + RR + VA++ A VAV + + L V+ R R+ Q LKI++V WQI++QF+ VA++TYP AY+ F+ IDV++ DL L+A C W D +F+D LL+ T+ PLV G +++++ + RR G G + +H+H +AL L++FL+YSS SSTVFQTFAC+ +D G +LR D++I C +H+ + YA +M +VYP GIP YA L+Q RR + D + + A + L PY+ + +YYEV+EC RR+ L+G+V FI PN A Q+ T L++ F F V+ PYT DTWL+R GH IV +SMF AL++KVD + SQDVFAG V + ++L ++ E G+C A
Sbjct: 436 GTELYPATFSGCKFFDNKASGGTGGAVETLSGRQEFISCDFEGNSAYVGGAMRLG-GTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAG-LYREDTEGEPSARFETVCLDCP--ECDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEGNAGCFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQ-RRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLA 1035
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 379 bits (973), Expect = 2.080e-111 Identity = 236/587 (40.20%), Postives = 334/587 (56.90%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGG---FVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGP--AVSNVVTI-DVSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIR-NRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATV--LRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
T S C F N A GGAV A G F D V F GN LA G A++ +CSF N + G AVSNV I ++SNT F N C DT FL + G + AC C+ C C P V LC VI H+ S TLETL + GYWR+++ S E+ CY VD+CVGG A +Y GY+GP+CA+C++ Y+ +G+TCSKC R I +A LA + + V + V+ + +R Q LKI++V+WQIV+QF++ A+VTYPD Y+ F+ +DV + D+ W+LSA C +D +F+D LL++TI P++ L+ ++ R R + V RH + + L+ FLVYS SS VFQTFACD ++ G +LRAD+ I+C +++H+ + YA M L+YP GIP Y A L + R ++ D + D V + L PY+ VYYYEV+EC RR+ L+G+VVFI PNTA Q+ T +++++F L PY DTW++R+ HA+V MS++VAL++KVD + G SQ VF LV + M+L V+ E
Sbjct: 415 TFSRCRFTFNRATATGGAVDSASGQDLFEDTV---FRGNQAVTGGALRLA-GRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDT-FLNYTSGDALDEACSGCQTT-CDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCP--NRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIM--ALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 376 bits (966), Expect = 2.050e-110 Identity = 227/587 (38.67%), Postives = 329/587 (56.05%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIG--PAVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISF----AIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA--LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
T C F N A+ GGAV A G V F+GN LA G A V++CSF N + G AVSN+ + VSN F N C + + G+ YE CD C PVEC C+ P V C +EH+ S TL+ L ++ GYWR++ S + ECY D+C+GG + Y GY+GP+CAVC+ GYT +G CSKC +GV++ +A + VA + G S RA RT R Q +KIVIV+WQI++QF++VA++ +P Y+ F+ +++ + DL W+LSA C D +F+D LL++TI P+V GL+ ++ A RN +ED RV H+H + + L++FLVY+S S+ +FQTFAC+++D +++LRAD+ I+C + +H + YA M ++Y GIP Y L++ ++ D A + L PY+ V+YYEV+EC RRV L+G+VVFI PNTA Q+ L++++F L PY DTWL R+GHA+V +SM+VAL++KVD + SQ VF LV + MV V+ E
Sbjct: 372 TFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLA-GTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGC-PVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTG--RFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIV--GLLFLAAVYAAAARNSHRSSED---LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLE 949
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 384 bits (985), Expect = 3.430e-110 Identity = 229/585 (39.15%), Postives = 332/585 (56.75%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGP--AVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCL-GASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATV--LRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEA 2979
T +C F N A+ GGA+ A G F+GN LA G A + +CSF N + G AVSN+ I ++N F N C T +E C+ C C C + +C V++H+TS N TL+TL + RG+WR+S+ S E+ CY D+C+GG A Y GY+GP+C +C++GYT + + CSKC I VA+VLA + V +A V + V + I R Q LKIVIVSWQI++QF++VA+VTYPD Y+ + +DV + DL W+LSA C VD NF+ LL++TI P+V L+ ++A R + ++ + + ++H T + L++F VYSS SST+F+ FACDD+D + +LRAD+SI+C ++EHR YA M ++Y GIP YA L+++R +K + + V + L PY+ V+YYEV+ECFRRV L+G+VVFI PNTA Q+ T L++ F L PY DTW++R+GH +V +SM+VAL++KVD + SQ+VF LV V+ M+L V+ EA
Sbjct: 905 TFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLA-GEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETT-CDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGG-IAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAA-ARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 384 bits (987), Expect = 1.060e-109 Identity = 226/583 (38.77%), Postives = 345/583 (59.18%), Query Frame = 1
Query: 1264 CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTE-FGDNTLWCDDDTLFLAWQIGSPYEIACDACRPVECSTCTTS--NPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGAGDYRAV---GYDGPFCAVCAEGYTRGVGYTCSKC--DAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA---LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAE 2976
C F DN A GGA+ A G+ A+ F+ N L G A + +C+F N A GPAVSN+ +D+ T F N L C++ ++L G Y+ CD C PV S S N D V +C ++HT S + T+ETL+L GYWR+++ S + CY D+CVGG + A GY+GP+C+VC+EGY+ + +TC++C D G + V + + A+ AL + + +E A R I R + Q +KIV+V WQI++QFS+VA+VTYPD Y+ F+ +++++ D++W+ SA C V+ +F+ LL+ TI PLV L+ I++ + RR + + +++H+H + + L++FLVYSS S+TVFQ+FAC+D+D + +LRAD+ I+C ++EH+ + +A +M LVYP GIP Y LY+ RR +KS+ R + ++ L PY+ +YYEV+EC RR++L+G+VVFI PNTA QV T +++ F +VL PY D ++ +GH IV SM+ AL+ KVD + SQ+VFAG LV + MV+ V+ E
Sbjct: 1174 CLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLG-GSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENG-MYLDSVDGDRYQTVCDGC-PVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAI---ALCMHLVSGEMEGARRGVIH-RVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQ-KIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVE 1748
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 375 bits (962), Expect = 9.440e-109 Identity = 261/781 (33.42%), Postives = 389/781 (49.81%), Query Frame = 1
Query: 730 GGAIWMYGSE--FSTVNNTFSDNHATLDGGVIHADELNWTSDSCTLSNN-ECGGAGGRFTGVITVPGSAVFEENYATLNGGGVSLIDSELQVLTGXXXXXXXXXXXXXXXXXXXTVSLISVEGQMTFTENSAXXXXXXXXXXXXGL-QIXXXXXXXXXXXXXXXXXSFLSVGQSIDIATVSS----CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI-GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQI----GSPYEIACDAC-RPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGA---SVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTN--FYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRV---KHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
GGA++++ SE +S N TF+ N A DGG ++A TL + EC +GGR T F N A GG + + + + S++++ G +TFT NSA Q + G ++ V + C F N A + GG V A G + V F N+ L G VD C+F N+A G A++ V +++S+T F NT +C + Y+ C C EC +C+ C +++T S +LETL + RGYWR+S+ S+ I CY ++C+GG + GY GP+CAVC GY + +TC++C + RR+ + V AA+AVV A S E + + + R Q KI+IV WQI++QF++ A++++PD Y+ F+ +DV++ DL ++++ CW D N F+D LL++T+ PL++ G + ++A+ RR + G ++ V +H+H +A LV+FLVYSS S+TVFQ FACD +D G ++LRAD+ I C + +H YA M +YP GIP YA L+ RR + D + + A L PY+ + +YYEV+EC RRV L+G+VVFI PNTA QV T L++ F + +L PY D WL+R GH IV +SMF L++KVD + SQ VFAG +V +C M L VI EA G+C A
Sbjct: 404 GGAMFVWASEVLWSAGNTTFAHNLAYDDGGALYA----------TLDHRIEC--SGGRTT----------FWNNTAAAGDGGALGLYGSMALSS----------------------SVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTGNGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLG-GKTNVDGCAFVANSASSRGLAIAAVGFVNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFV----VAAAIAVVXXXXXXXXXCAHLISGEVSEQSCLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHH-RRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYA 1134
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 374 bits (959), Expect = 4.860e-106 Identity = 224/597 (37.52%), Postives = 321/597 (53.77%), Query Frame = 1
Query: 1249 ATVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPIGPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQIGSP---YEIACDACRPV-ECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGG---AGDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRC-----LGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAEC-WVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAE-DGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSA 2997
+T+S C+F DN A +AGGAV GF + C F+GN L AV V + + ++ F N L C + P +E C C EC C ++ CE +EHT++ TLETL L GYWR+++ S+ I CY D+C GG A + A GY GP+CAVC Y+ + +TC C + RR V+AA+AV+V L L E R R + + LKI++V WQI++QF+ A+VT+P Y+ F+ IDVI+ D+ +L+A C W D +F+D LL+ TI PLV++G + +++ I RR A D ++ H+H TAL ++F+VYSS SSTVFQTFAC+ +D +LRAD+ I C +H+ + YA +M +VYP GIP YA L+Q RR + +D + + A + L PY+ + +YYEVVEC RRV L+G+VVFI PN A Q+ T L++ F F +L PY D WL+R GH IV +SMF L++KVD G+ SQ +F+ V + M+L ++ E G+C A
Sbjct: 1029 STISGCNFSDNVAEEAGGAVKTLAGFQNIFSCHFEGNSADVGGAMRLGGEATXXXXXXXXXXXXXXXLAVDVVESASIHDSTFNGNQLSCGKGWFRSDTEQEDPNARFETVCVDCPAWDECFECIIADGTITPTCEVPLEHTSADEDGLTLETLKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLT----VIAAIAVIVTVLAFAAVFQYMLSTEHEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQ-RRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYA 1620
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 363 bits (933), Expect = 1.380e-105 Identity = 224/594 (37.71%), Postives = 326/594 (54.88%), Query Frame = 1
Query: 1252 TVSSCSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSFSGNNAPI---GPAVSNVVTIDVSNTEFGDNTLWCDDDTLFLAWQI-GSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGA---GDYRAVGYDGPFCAVCAEGYTRGVGYTCSKCDAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKS-DVESIRDKATVLRALHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAFGLCSAVARE 3009
T + C F DN A +GGA+ + G DF N LA ++ C+F GN A GPAVSNV +DV N+ F N + C + ++ G YE CD C P T + V C +E+T S N ++E + + GYWR+++ + + CY D+C+GG Y GY GP+CA+C E Y R + + C+KC +G +GV V +A+AV AAL + E + + + + LKIV+V WQI++QFS VA+VTYP Y+ F+ IDV++ D+ W++SA C VD +F+D LL TI P+++ G++ ++A + R D + +RV +H +A+ LV+FLVYSS SSTVF+ F CD + S+LRAD+SIQC +T+HR +AV M L+YP GIP Y LY R +K +A + AL PY YY EVVEC RR+ L+G+VVFI PN+A Q+ + L++ F VL P+ D W++R GH ++ ++MFVAL++KVD + SQ +FAG LV+ N + +AE + AV E
Sbjct: 437 TFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSFVDYYESEGGRYEAVCDGC-PAADDGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGE-GVAVGVIFV-SALAVGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSD-EAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKME 1026
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 365 bits (937), Expect = 5.480e-104 Identity = 225/586 (38.40%), Postives = 325/586 (55.46%), Query Frame = 1
Query: 1264 CSFHDNGAVDAGGAVFIAGGFVDAVGCDFDGNFXXXXXXXXLASGVATVDSCSF---SGNNAPIGPAVSNVVTID-VSNTEFGDNTLWCDDDTLFLAWQI--GSPYEIACDACRPVECSTCTTSNPDEVQLCEPVIEHTTSPTRNGTLETLDLQRGYWRSSSMSIEIRECYEVDSCVGGA---GDYRAVGYDGPFCAVCAEGYTRGVGYTCSKC--DAGRRDWTIGVALVLAAVAVVVAALGVRCLGASVERAARWTIRTRFERSTASQGLKIVIVSWQIVSQFSAVASVTYPDAYEAFVGYIDVIDLDLVWMLSAECWVDTNFYDTLLITTIVPLVISGLVLISFAIRNRRCGAEDGDRRSRVKHRHATALYLVSFLVYSSASSTVFQTFACDDIDTGESFLRADHSIQCYTTEHRVYMAYAVLMCLVYPFGIPFCYAATLYQARRGIKSDVESIRDKATVLRA--LHAPYQRDVYYYEVVECFRRVTLSGIVVFILPNTAGQVMTTFLLSLLFFAAFMVLDPYTDGLDTWLARLGHAIVMMSMFVALVVKVDTEGDDGFSQDVFAGALVLVNCAMVLTVIAEAF 2982
C F DN A +GGAV A G V F GN LA SG G AVSN+ + ++N+ F N C D LFL + +E CD CR V C C+ P V C V++H TS TLETL + GYWR++S S EI CY D+C+GG Y Y+GP+C++C++GY +GY+CSKC +G + +G+A++ VAVVV + G + ER R + R Q +KIVIVSWQI++QF++ A+V YP Y+ F+ + V DL W++SA C +D F+ LL TI P+ L+ ++A R E ++ + +H L++FLVYSS SST+F+TFACD+++ G+++LR D+ I+C +++H+V+ YA M L+YP GIP Y+ L++ R +K D D A V L PY+ V+YYEV+EC RR+ L+GIVVFI PNTA Q+ T +++ F + PY+ +TW+ R+GH +V +SM+VAL++KVD + SQ VF LV V+ M+L+V+ E F
Sbjct: 825 CRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQE--GAAVSNIGLVSTMANSSFTGNGFTCGPD-LFLEYDATDNGTFEAVCDGCR-VACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVV--IMYIMSGEAGER--RMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATR-INREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETF 1401 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig633.28.1 >prot_P-littoralis_Contig633.28.1 ID=prot_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1005bp MKPIFPLLPVGGLVTLLACQRSSAVPCTSSTLVAPTVVNDAAGALLLAQAback to top mRNA from alignment at P-littoralis_Contig633:118071..122801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig633.28.1 ID=mRNA_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4731bp|location=Sequence derived from alignment at P-littoralis_Contig633:118071..122801- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig633:118071..122801- >mRNA_P-littoralis_Contig633.28.1 ID=mRNA_P-littoralis_Contig633.28.1|Name=mRNA_P-littoralis_Contig633.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3015bp|location=Sequence derived from alignment at P-littoralis_Contig633:118071..122801- (Pylaiella littoralis U1_48)back to top |