mRNA_P-littoralis_Contig633.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig633.1.1
Unique NamemRNA_P-littoralis_Contig633.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: D8LK97_ECTSI (Divergent RAB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK97_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.200e-128
Identity = 304/586 (51.88%), Postives = 340/586 (58.02%), Query Frame = 1
Query:    1 MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSVKGTMQRVXXXXXXXXXXXXXXXXXXXXXXRRKYIQKPPQQLPGVHVPPSPKEEGDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSACTPSS----TRATXXXXXXXXXXXXSHSTSQELRRRGPGSPVAQSGTGDAPTARLLERPKKATPPTVGRYVRSGSVTNIPPXXXXXXXXXXXXXXTAPVSGSPTGSLKGGHEYGGGEP-----------LERPGDAKKAXXXXXXXXXXDTAKKQLKEATSFWLGKWGIKATKTDASRGRH-KRITGSPP 1710
            M RSC  RV DA CPCFR+    S+ S  GA G  HDMSLNFILHGEC VGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEE                       G  K G+       K  PCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISS++TL+ELRRYFS+P+HR+KLAAKK+AGMAM+LVGNKCD+PLSQRQ VGSQTGQDTAAEFG+PFVEVSAKTG NVREAFMF TTRAVGE LAR +LK+     RG     ++VK TMQ+V                      RR+Y QK     P + +P          XXXXXXXXXXXXXXXXXXXXXXXX                                 A  P      +RA             + + SQ L++R P SPVA SGTGDA T+ LLERP+  +P  V R     +   I                T   +      L  G    G  P                     XXXXXXXXX ++A KQL+EA+SFWL KWGIKA KTDA+R RH K   GS P
Sbjct:    1 MGRSCCRRVLDALCPCFRQNRLGSSPSVSGASGE-HDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDGGDQTREEEPAVAGKTLPSGGRGKGGSTT-----KQAPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSVSTLNELRRYFSDPEHRDKLAAKKKAGMAMLLVGNKCDMPLSQRQ-VGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRG-----ATVKKTMQKVPGLQRALRTRASVLDVFKGLTGRRRYPQK---AQPVIVLP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXAAERPLQRLPSSARRGGRGGLGQGTTARAWALRAAAPPHRRHLSRAKSPSPRGLATASAAAAASQGLQQRRPESPVALSGTGDAATSSLLERPE-LSPVEVERRSEGAAFRKI----------GASTLATTTAAEDKESVLACGRRSSGTSPERTVSTXXXXXXXXXXXXXXXXXXXXXXXXEESATKQLREASSFWLDKWGIKAAKTDATRERHSKEFRGSYP 553          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A6H5KHP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP3_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.830e-118
Identity = 278/550 (50.55%), Postives = 321/550 (58.36%), Query Frame = 1
Query:    1 MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSVKGTMQRVXXXXXXXXXXXXXXXXXXXXXXRRKYIQKPPQQLPGVHVPPSPKEEGDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSACTPSSTRATXXXXXXXXXXXXSHSTSQELRRRGPGSPVAQSGTGDAPTARLLERPKKATPPTV-----GRYVRSGSVTNIPPXXXXXXXXXXXXXXTAPVSGSPTGSLKGGHEYGGGEPLERPGDAKKAXXXXXXXXXXDTAKKQLKEATSFWL 1635
            M RSC  R  DA CPCFRR    S+ S  GA G  HDMSLNFILHGEC VGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEE                       G  K G+       K  P ADL+VKINVYDTSGKPGYR+VNSTYLLAFDAVLFVYDISS++TL+ELR+YF+NP+HREKLAAKK+AGMAM+LVGNKCD+PLSQRQ VGSQTGQDTAAEFG+PFVEVSAKTG NVREAFMF TTRAVGE LAR +LK+     RG     ++VK TMQ+V                      RR+Y    PQ+   V + P+      N+XXXXXXXXXXXXXXXXXXXX                                      C  S  +++              +  Q L++R P SPVA+SGTGDA T+ LLERP+  +P  V     G   R G  + +                      SP  ++       GG   +    A   XXXXXXXX  ++A KQL+EA+SFWL
Sbjct:    1 MGRSCCRRALDALCPCFRRHRLGSSTSVSGASGE-HDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDEGDQAREEETAVAGKTLPSGGRGKGGSTA-----KQAPHADLKVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSVSTLNELRQYFNNPEHREKLAAKKKAGMAMLLVGNKCDMPLSQRQ-VGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRG-----ATVKKTMQKVPGLQRALRTRASVLDVFTGLTGRRRY----PQKAQPVGILPAAPPTAGNAXXXXXXXXXXXXXXXXXXXXERPLQRPSSSARRGGRGGLGQGTTAQAWALRAAAPPHRCHLSRAKSSSPRGLTTAAA----AAFQGLQQRRPESPVARSGTGDAATSSLLERPE-LSPVDVERGSEGAAFRKGGASTLATTTAAEDKESVLACGRRSSGTSPERTVS----TSGGSHGDVSQGAXXXXXXXXXXXAEESATKQLREASSFWL 525          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A0W4ZI42_PNEC8 (GTP-binding protein ypt2 n=1 Tax=Pneumocystis carinii (strain B80) TaxID=1408658 RepID=A0A0W4ZI42_PNEC8)

HSP 1 Score: 98.2 bits (243), Expect = 8.190e-20
Identity = 67/246 (27.24%), Postives = 109/246 (44.31%), Query Frame = 1
Query:  106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSV 843
            +D  +  +L G+  VGK+ L  R+ D  FT     T G+DF I+T++L  +                                              ++K+ ++DT+G+  +R + + Y      +L VYD++   +   +R + SN +           G+  +LVGNKCD    +R+ +  + GQ  A EFGIPF+E SAK+  NV +AF F   R + +RL   Q  R   G   LL  ++S+
Sbjct:    9 YDYLIKLLLIGDSGVGKSCLLLRFSDDFFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITAAYYRGAMGILIVYDVTDEKSFQNVRLWVSNVEQHAS------EGVNKILVGNKCD--WEERRVISEEQGQALAQEFGIPFLETSAKSNINVDDAF-FCLARGIKKRLIDSQENRISEGSNVLLDKANSI 199          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: M5X0Z8_PRUPE (Uncharacterized protein n=6 Tax=Prunus TaxID=3754 RepID=M5X0Z8_PRUPE)

HSP 1 Score: 94.7 bits (234), Expect = 1.670e-18
Identity = 64/234 (27.35%), Postives = 105/234 (44.87%), Query Frame = 1
Query:  106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQP 807
            HD  +  +L G+  VGK+ L  R+ DG FT     T G+DF I+T++L  +                                              ++K+ ++DT+G+  +R + + Y      +L VYD++  ++ + +R +  N +    ++  K      +LVGNK D+  S+R  V +  GQ  A E+GI F+E SAKT  NV E F F   R + +RLA    +  +P
Sbjct:   12 HDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASVSVNK------ILVGNKADMDESKRA-VPASKGQALADEYGIKFLETSAKTNMNVEEVF-FSIGRDIKQRLAESDARGTEP 191          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A1Y2HP65_9FUNG (Ras family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HP65_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 2.020e-18
Identity = 61/230 (26.52%), Postives = 104/230 (45.22%), Query Frame = 1
Query:  100 STHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQ 789
            ST+D  +  +L G+  VGK+ L  R+ D  FT     T G+DF I+T++L  +                                              ++K+ ++DT+G+  +R + + Y      +L +YD++   + + +R +  N +          AG+  +LVGNKCDV  + ++ +  + GQ+ A EFGI F+E SAK+   V EAF F   + + +RL   Q
Sbjct:    6 STYDHLIKLLLIGDSGVGKSCLLLRFTDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLIYDVTDERSFNNIRNWIRNIEQHAS------AGVNKILVGNKCDV--ADKKVISKEQGQELADEFGIKFIETSAKSNIGVEEAF-FSLAKDIKKRLIDSQ 180          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A7S3ACI0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACI0_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 8.050e-18
Identity = 55/226 (24.34%), Postives = 103/226 (45.58%), Query Frame = 1
Query:  103 THDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLA 780
            ++D+ +  ++ G+  VGKT+L  R+ D  F   + PT G+DF IKT++L  ++                                              +++ ++DT+G+  +R +   Y      +L +YD++++ +   +R +  N D        K      +L+GNKCD+  + ++QV +  G+  A E+G+ F+E SA+   NV +AF+ + T  V   LA
Sbjct:    9 SYDLQIKLMMIGDQAVGKTALLVRYADKEFHEQLLPTIGIDFKIKTIELQGKK----------------------------------------------IRLQIWDTAGQERFRNITQAYYRGAMGILLIYDVTNLKSWSNVRNWVRNIDGNTPQTVNK------ILIGNKCDI--TGQRQVTTAQGEQLAREYGMKFLETSARANTNVTDAFLTIATDVVERLLA 180          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A0L0SKN2_ALLM3 (Small GTP-binding protein domain n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SKN2_ALLM3)

HSP 1 Score: 92.4 bits (228), Expect = 8.610e-18
Identity = 61/235 (25.96%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  100 STHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQ 804
            ST+D  +  +L G+  VGK+ L  R+ D  FT     T G+DF I+T++L  +                                              ++K+ ++DT+G+  +R + + Y      +L  YD++   +   +R +  N +           G+ M+LVGNKCD  +  ++ +  + GQ+ A EFGI FVE SAK+   V +AF F   R + +RL   Q  +++
Sbjct:    7 STYDYLIKLLLIGDSGVGKSCLLLRFCDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLAYDVTDERSFKNIRNWIKNIEQNAS------QGVNMILVGNKCD--MGDKKVISKEQGQELADEFGIKFVETSAKSNLGVEDAF-FSLARDIKKRLIDTQAPKEE 186          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A6S8IR56_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IR56_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.230e-18
Identity = 60/224 (26.79%), Postives = 97/224 (43.30%), Query Frame = 1
Query:  106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERL 777
            +DM +  ++ G+  VGKT L  R+ +  F+     T G+DF IK +D+                                                 ++K+ ++DT+G+  +R + ++Y      +L VYD++   + + +R + S       +   K      +LVGNKCD  +   + V +  GQ  AAEFGIPF EVSAK    V E+F  +   AV +RL
Sbjct:    8 YDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDI----------------------------------------------QGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNK------ILVGNKCD--MMDEKVVSTAEGQKLAAEFGIPFAEVSAKNDIKVDESFQSLAA-AVKDRL 176          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A8C1S1Y4_CYPCA (Multiple EGF-like-domains 8 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1S1Y4_CYPCA)

HSP 1 Score: 92.0 bits (227), Expect = 9.740e-18
Identity = 59/232 (25.43%), Postives = 105/232 (45.26%), Query Frame = 1
Query:  103 THDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKR 798
            T+D     +L G+  VGKT L  R+ +  F      T G+DF I+T++L +++                                              +K+ ++DT+G+  +R + + Y      ++ VYDI+S  + + ++ +  N +       +K      +++GNKCD  ++ R+QV  + G+  A ++GI F+E SAKT  NV EAF F   R +  RL R+  ++
Sbjct:    4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNEKK----------------------------------------------IKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEK------MILGNKCD--MNDRRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAF-FTLARDIMARLNRKMTRK 180          
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A1D1ZIW7_9ARAE (Ras-related protein Rab-8A n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIW7_9ARAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.230e-17
Identity = 63/237 (26.58%), Postives = 104/237 (43.88%), Query Frame = 1
Query:  106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRR 816
            +D  +  +L G+  VGK+ L  R+ D  FT     T G+DF I+T++L  +                                              ++K+ ++DT+G+  +R + + Y      +L VYD++   + + +R +FSN +           G+  +L+GNKCD    +++ +  + GQ  A EFGI F+E SAK   NV EAF F   R + +RL     +  QP  R
Sbjct:    9 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRNWFSNIEQHAS------EGVNKILIGNKCD--WLEKKVIAKEQGQLLADEFGIKFLETSAKANTNVEEAF-FTLARDIKKRLIDNHSQDPQPRNR 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK97_ECTSI3.200e-12851.88Divergent RAB-like GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KHP3_9PHAE1.830e-11850.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A0W4ZI42_PNEC88.190e-2027.24GTP-binding protein ypt2 n=1 Tax=Pneumocystis cari... [more]
M5X0Z8_PRUPE1.670e-1827.35Uncharacterized protein n=6 Tax=Prunus TaxID=3754 ... [more]
A0A1Y2HP65_9FUNG2.020e-1826.52Ras family-domain-containing protein n=1 Tax=Caten... [more]
A0A7S3ACI0_9EUKA8.050e-1824.34Hypothetical protein (Fragment) n=2 Tax=Haptolina ... [more]
A0A0L0SKN2_ALLM38.610e-1825.96Small GTP-binding protein domain n=1 Tax=Allomyces... [more]
A0A6S8IR56_9STRA9.230e-1826.79Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8C1S1Y4_CYPCA9.740e-1825.43Multiple EGF-like-domains 8 n=1 Tax=Cyprinus carpi... [more]
A0A1D1ZIW7_9ARAE1.230e-1726.58Ras-related protein Rab-8A n=1 Tax=Anthurium amnic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig633contigP-littoralis_Contig633:43696..48836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LK97
PFAMsDNA_pol_A_exo1,Kelch_4,R3H,Ras
Model size1710
Max annot lvl2759|Eukaryota
KEGG koko:K07874
KEGG Pathwayko05134,map05134
Hectar predicted targeting categorymitochondrion
Exons8
Evalue5.24e-129
EggNOG OGsKOG0084@1|root,KOG0084@2759|Eukaryota
Ec32 ortholog descriptiondivergent RAB-like GTPase
Ec32 orthologEc-16_002590.1
DescriptionGTPase activity
Cds size1710
COG categoryS
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig633.1.1prot_P-littoralis_Contig633.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig633 43696..48836 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791320.7317352-CDS-P-littoralis_Contig633:43695..440461680791320.7317352-CDS-P-littoralis_Contig633:43695..44046Pylaiella littoralis U1_48CDSP-littoralis_Contig633 43696..44046 +
1680791320.7474647-CDS-P-littoralis_Contig633:44097..442681680791320.7474647-CDS-P-littoralis_Contig633:44097..44268Pylaiella littoralis U1_48CDSP-littoralis_Contig633 44098..44268 +
1680791320.76045-CDS-P-littoralis_Contig633:44811..449311680791320.76045-CDS-P-littoralis_Contig633:44811..44931Pylaiella littoralis U1_48CDSP-littoralis_Contig633 44812..44931 +
1680791320.772031-CDS-P-littoralis_Contig633:45658..458921680791320.772031-CDS-P-littoralis_Contig633:45658..45892Pylaiella littoralis U1_48CDSP-littoralis_Contig633 45659..45892 +
1680791320.783333-CDS-P-littoralis_Contig633:46730..469171680791320.783333-CDS-P-littoralis_Contig633:46730..46917Pylaiella littoralis U1_48CDSP-littoralis_Contig633 46731..46917 +
1680791320.7943492-CDS-P-littoralis_Contig633:47100..474471680791320.7943492-CDS-P-littoralis_Contig633:47100..47447Pylaiella littoralis U1_48CDSP-littoralis_Contig633 47101..47447 +
1680791320.8058484-CDS-P-littoralis_Contig633:48027..482521680791320.8058484-CDS-P-littoralis_Contig633:48027..48252Pylaiella littoralis U1_48CDSP-littoralis_Contig633 48028..48252 +
1680791320.8189147-CDS-P-littoralis_Contig633:48761..488361680791320.8189147-CDS-P-littoralis_Contig633:48761..48836Pylaiella littoralis U1_48CDSP-littoralis_Contig633 48762..48836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig633.1.1

>prot_P-littoralis_Contig633.1.1 ID=prot_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=570bp
MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNV
GKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEEEEEEGEEEDGQG
EEDEEEARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREV
NSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMV
LVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFV
TTRAVGERLAREQLKRQQPGRRGLLSASSSVKGTMQRVPGLRRALRARAS
VLDVLKGVSGRRKYIQKPPQQLPGVHVPPSPKEEGDNSRGRGGGGGGGGG
GEGGAAAATATATATATATATATATVSASSSATTVSQGRWSWGFSACTPS
STRATSTVAAPSSSSPSSHSTSQELRRRGPGSPVAQSGTGDAPTARLLER
PKKATPPTVGRYVRSGSVTNIPPPSSPAAAAAAAASSTAPVSGSPTGSLK
GGHEYGGGEPLERPGDAKKAAAATAAAAAEDTAKKQLKEATSFWLGKWGI
KATKTDASRGRHKRITGSPP
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mRNA from alignment at P-littoralis_Contig633:43696..48836+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig633.1.1 ID=mRNA_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5141bp|location=Sequence derived from alignment at P-littoralis_Contig633:43696..48836+ (Pylaiella littoralis U1_48)
ATGCCGCGGAGTTGTTACGCACGCGTGTTCGATGCGGCCTGCCCTTGCTT CCGTCGTTGGTCGTCGGCGTCTACGGCGTCGTCAGGCGGCGCTTTTGGCA GCACCCACGACATGAGCCTAAACTTCATACTTCACGGAGAGTGCAACGTC GGTAAGACGAGCCTCAGGAACCGGTGGGTCGACGGTATTTTCACGGGAGA CGTAGCGCCTACGTTTGGCGTAGATTTCAACATCAAGACTCTCGACCTGG TGCAAGAGGAAGAGGAAGAGGAAGAGGGAGAGGAAGAGGACGGACAAGGT GAAGAAGACGAAGAGGAGGCGAGGGGGGAAGGGTGGTCGAAAGCTGGAGC TGTAGCTGACGAAACTCAAAGAGGAGTCGAAGTTGGAGGACAGAGTAGGA AGAAGCAGCGTCCGACGAAGAAGAAGCACGTGCCGTGCGCGGACCTTCAG GTTAAAATCAACGTATACGACACCAGCGGCAAGCCTGGCTACCGAGAAGT GAACAGCACGTACCTGCTGGCCTTCGATGCGGTGCTCTTCGTCTACGATA TCTCCTCGATGGCGACCCTGGATGTGAGTGCACGAGTAACATGTTGTACT GCTGTATCATACGAGTGCGGCATTTGTTTTCACCATGTTCGCAGCAACGG ACGGTGAAAAAGTACTACGAAGTGCTGTTACTGCTGGTACTCGTGGTGGT CAGTCACGTACCTGGCACAAGAGTTCCAGTGTACGGCCGTATGCGATATC AAACGAAAAGTATGGAACAGAGGGTACATCCGTGGTAACAGAGTAACGTT AACGTTTGCACAGACACATACGAGTATTGCGGGAGTACACGCAGTGGTGG TCGTTCAGTAATACTCATCATGACGGTGCACATACTTGACCGAGATGTTC TACAGAGGTATGCACTCCCTGAGACAATTTCGTGCGCGGAAGAGGGTAAA CAGAACAACCCAATGCGCGAAGGCAGGGGCTGAAAAATGCAACGCATTAC ACAGAAAGACAAGAACCACGTGAGACATTTTGTCAAATAATGGCCAACGA CACCCCGCTTGCGCCAAATCGGCTGCACCTTTATCCTCTCTCCTGTACGC CATCGATGCCCGGCAGGAGCTACGCCGATATTTTAGCAACCCAGACCACC GCGAGAAACTCGCTGCGAAGAAACAAGCCGGCATGGCGATGGTTCTGGTT GGGAACAAGTGCGACGTGCCACTGTCACAGCGACAGGTGCTTGATGCGGC CCTGGGCGGGAGAGGGGGGGGGGGCACTGACGTTTTAGCTTGCCTTCTTC AGACCGTTGGTCACCCAGTTCAGTTGAGACGGAGCACCGCCATTCTCTCC CGTCGTGAAACAGTAGTGACTGGAATGACGCGCCACTTTCCGGCGATTAT CTCACGGTCTCTGCGCCCGACTGGCTGGATGTTCGTCGTGCGGTACAAAA TTATTCTGCCCTATTGACTGCTGTCTTCTGGCTGCGGGCTGCACCCCTCG GCCATTCATTTAGTCGGGGTATCGTAAAGAGAACAACCTGTGAGTGTTCA CGTGGTCTTGAACCTCAATGAGCCAAAACTACTGTAACACGGTCACGTGA TGCTTACCTGTAAATCACTTCCACTTCTCTTCAACCCCACGTCCCCCCTT CTCGTTAACTATTCATTTCTCGGACTTTCACCCACAAGAAAGATTATGCA GCCAGACGCGCGCTACAAGGCGCCGTACAGTACATAGAGATATGGTACCT GGTAGGTTTCTAGTGGTTTCAGCTTTTCTGTCCGCTTGCGCTACTACGCT TGCGCTACTACGCTAGCGCTCCTACGCCAGCGTCCCGCGCGGTAAACATC AAGTATTGTCCCTCCTCCCGTCCCCCTCCCCCTCCCCTCCCCCTCCCCAC CCACCACCGCCTCCGCCGACACCTCCAACGGTCGTCTGCCTACCTTACTG CCGGCGGGGCGAGCAGGTTGGATCACAGACAGGGCAAGACACAGCGGCAG AGTTCGGCATCCCTTTCGTAGAAGTCAGTGCGAAGACGGGGGCCAACGTG CGAGAGGCCTTCATGTTCGTCACGACTCGAGCTGTCGGGGAACGCCTCGC TCGCGAGCAGCTGAAACGTCAGCAACCTGGAAGGCGGGGGCTGCTGAGTG CGTCGTCGTCGGTGAAGGGAACGATGCAGAGGGTTCCAGGTCTTCGGGTG AGTGAGGGAAGAAGGAAGAAAGGGAGGGAGGGAGGGACGGACGGACGGAC GGACGGACGATGGGCCGGAGGGAAGGAGAGAGGAAAAGCGTGTCCTATCT ACGAGCGATAACGTAGCCAAACCGAAAAATCTTGACCAACTTTTCTTGCG CGCGCAGCTTGACCGAACGGACTTACACCTTCTGAAAATGGGCGTATTCG TTTGTTGCTGGCGTTAGTTTTACGACCTTGAAGGGGGAGAGGTTTGTTGG TGGTACACCGTGGTTGAGGGAGGAAGAAGAATGAGCAGAGTGGACTTGGA CCCTCCGTAACATAAGGCAAGAGCGGGGGCCGGTTTTATTCTGTGGAATC ATTTCCAATTTTCTCATTTTGGATGTTGGGAGCTTGGGACCGCAAGATTC AGATAGACAGGCAGGGTGTGGACCTCGATGTTCTATTTCTCGCTTTGCGC AGTCGGCTCCTTGCAGAGTTATAGCAGATTGCCCCCGGTCAATCGATCTT CCCCGAACGAGCCTCAACGACACATCCCTCCCAGGGTTTCGTTTCGACAA GTAGTGTTGGGGTATCGGTCAAAATGACTCACGCAGCGACCAAGCTCCTC TGGTATACATATTTACTTTCGAAATATACACGTAGTGAAATGCAATAAGC ACGCCTCACGCAGATAACTCACAGGGAATGAGACACTTTTCGCACAAAGC AATATTTCGCTTTTTTTCCCCATTGGATGCAACAACGAACGACAAACAAA ATCACTGCATAAACACCGGACAATTCCTTGTGAATTACTTCGTACGTGAA ACGAAACTGAAACATTTCTCAAACGTGGACCGCAGCGCGCCTTGCGCGCG AGGGCCAGCGTGCTGGACGTGCTCAAGGGCGTGTCGGGGCGTCGGAAGTA TATCCAGAAACCGCCGCAACAACTACCCGGCGTGCATGTGCCCCCGTCTC CCAAGGAAGAAGGTGACAACAGCCGCGGCCGAGGAGGTGGAGGTGGAGGT GGAGGTGGAGGTGAAGGTGGAGGTGAAGGTGGAGGTTCAACGAGCGATCA GGCCGCAGGCGGTGAGCGGCTGAACGACGTCGAATCACCGCACCGCACAT CCGACGGAGAAGGAAGAGAAGGAGGAGCCGGGGGGAAGGGGGAGAGGCTG AGAGAAGGCCCGGGCAAGCCCAGCAGAGGTACAACAAGGACAGCGGCAGC GGCAGCGGCAGCTGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGG CAACGGCAACGGCAACAGTGTCGGCCTCAAGCTCGGCGACAACGGTGTCT CAAGGGCGTTGGTCATGGGGGTTTAGTGCTTGTACGCCTTCTTCCACTCG TGCGACGTCGACGGTGGCGGCGCCCTCCTCGTCCTCGCCCTCCTCCCACT CCACCTCCCAGGAGCTGCGGCGTCGGGGGCCGGGCTCGCCGGTAGCGCAA AGCGGAACCGGGGACGCGCCGACGGCGAGGTTGCTCGAAAGACCGAAGAA GGCGACGCCGCCGACGGTGGGAAGGTACGTCCGCAGCGGAAGCGTCACTA ACGTTCGTTTCTCGCACCTGCTATGACGTGTGCGAGGGTCGCCCTTGTTT TCTCTCAGGCTGCCAGACAAAAGGAAGTGACGTACCTGTTGAGGATGATA AATTGATTCGATAAAAATGAAAAGAGATTGATTGGGACACAGACTCGTAT TCCTGTTTCGATGTGGTAAAACGGGGCTTGTTTGGAGCGCCAGCAGTCAA CAGGTTTGCTGAGGCCGCATGTGTCGGGGGCGTGGCTGCAACGACCCCAG GGTGATGTTTGACCTTGTTTCTTGCGGCCGCTTCTGGCGTCACATCCGTC GGTCAGTAATATTTGATAAGTACCTTCAAATCTACTGTATGAATTGTGTG AAAAACACCGTGAAAACCAACAAATCCGAAAAAGTTTCAAAATAGTAAAC CATTCTTTCCCCCACCTCCCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCC GCCCGCCCGCCCACCTGCTCGCTCCGCGTGCGCGCGTGCAGAATGTCCGG GCGGGAACTAACGGCCGTCGGCAAGGGGTCCTCTCGACTGCCACAGCAGT TGGGATTCAGGGCCAAACCTCTTATTGTTCAGATCCCTCCTCCTTCTTCG CCGGCTGCTGCTGCTGCTGCTGCTGCTTCGTCGACCGCCCCTGTGTCCGG CTCCCCGACGGGCTCGCTGAAGGGTGGGCACGAGTACGGCGGAGGGGAAC CTCTGGAGAGACCAGGCGACGCCAAGAAGGCGGCAGCGGCGACTGCCGCC GCCGCCGCCGAGGACACCGCGAAGAAACAGCTCAAGGAGGCCACCAGTTT CTGGTTGGTGAGTCGACATGGCAGACACGGCGTGGAGTGGTTTGATGTGG CGTGGTGTAGCGTTCTGTAGCGTGGTATGGGCGCGTTGTGGTGTGCGGCT CTCTAGTGTGAGCGCGGCGGGCGGGTTGCTCAACCGAAAGAGTGGGTTGA TCCGTTCAACGGTCGGCAGCCTATATACATTTGATGGTCATGTGATCTCG CTTCTCCTCTGGTCCTGTTTCAGGTCAGAGACCACCGCCACCGTCGTAGC TGCCACCGCCGCGCAAGTCGCTTCACAGGAGGGGGGACGAAACAACACCT CCTTCAACACCCGCGCGTCTTTCCCTCGAATTAATAGTGCCGCTTTCTCC TCATATCCCACCCCCGCCCCCGCCCTTCCATCGCTTTCCCACCCCCCTCT CTTCCGCGCTCTCTGCCCGTGTTGCCATTCGCCCACCCACCCACCCACTC ACCCACTCACCCACCCACCCACCGCTATGATGCCTCTGTGCTGCAATCTA ACGCCGACTCGAGCAGGGCAAGTGGGGGATCAAGGCCACCAAGACGGATG CCTCAAGGGGGCGGCACAAAAGGATCACCGGGAGCCCTCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig633:43696..48836+

>mRNA_P-littoralis_Contig633.1.1 ID=mRNA_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1710bp|location=Sequence derived from alignment at P-littoralis_Contig633:43696..48836+ (Pylaiella littoralis U1_48)
ATGCCGCGGAGTTGTTACGCACGCGTGTTCGATGCGGCCTGCCCTTGCTT
CCGTCGTTGGTCGTCGGCGTCTACGGCGTCGTCAGGCGGCGCTTTTGGCA
GCACCCACGACATGAGCCTAAACTTCATACTTCACGGAGAGTGCAACGTC
GGTAAGACGAGCCTCAGGAACCGGTGGGTCGACGGTATTTTCACGGGAGA
CGTAGCGCCTACGTTTGGCGTAGATTTCAACATCAAGACTCTCGACCTGG
TGCAAGAGGAAGAGGAAGAGGAAGAGGGAGAGGAAGAGGACGGACAAGGT
GAAGAAGACGAAGAGGAGGCGAGGGGGGAAGGGTGGTCGAAAGCTGGAGC
TAAGCAGCGTCCGACGAAGAAGAAGCACGTGCCGTGCGCGGACCTTCAGG
TTAAAATCAACGTATACGACACCAGCGGCAAGCCTGGCTACCGAGAAGTG
AACAGCACGTACCTGCTGGCCTTCGATGCGGTGCTCTTCGTCTACGATAT
CTCCTCGATGGCGACCCTGGATGAGCTACGCCGATATTTTAGCAACCCAG
ACCACCGCGAGAAACTCGCTGCGAAGAAACAAGCCGGCATGGCGATGGTT
CTGGTTGGGAACAAGTGCGACGTGCCACTGTCACAGCGACAGCAGGTTGG
ATCACAGACAGGGCAAGACACAGCGGCAGAGTTCGGCATCCCTTTCGTAG
AAGTCAGTGCGAAGACGGGGGCCAACGTGCGAGAGGCCTTCATGTTCGTC
ACGACTCGAGCTGTCGGGGAACGCCTCGCTCGCGAGCAGCTGAAACGTCA
GCAACCTGGAAGGCGGGGGCTGCTGAGTGCGTCGTCGTCGGTGAAGGGAA
CGATGCAGAGGGTTCCAGGTCTTCGGCGCGCCTTGCGCGCGAGGGCCAGC
GTGCTGGACGTGCTCAAGGGCGTGTCGGGGCGTCGGAAGTATATCCAGAA
ACCGCCGCAACAACTACCCGGCGTGCATGTGCCCCCGTCTCCCAAGGAAG
AAGGTGACAACAGCCGCGGCCGAGGAGGTGGAGGTGGAGGTGGAGGTGGA
GGTGAAGGTGGAGCGGCAGCTGCAACGGCAACGGCAACGGCAACGGCAAC
GGCAACGGCAACGGCAACGGCAACAGTGTCGGCCTCAAGCTCGGCGACAA
CGGTGTCTCAAGGGCGTTGGTCATGGGGGTTTAGTGCTTGTACGCCTTCT
TCCACTCGTGCGACGTCGACGGTGGCGGCGCCCTCCTCGTCCTCGCCCTC
CTCCCACTCCACCTCCCAGGAGCTGCGGCGTCGGGGGCCGGGCTCGCCGG
TAGCGCAAAGCGGAACCGGGGACGCGCCGACGGCGAGGTTGCTCGAAAGA
CCGAAGAAGGCGACGCCGCCGACGGTGGGAAGGTACGTCCGCAGCGGAAG
CGTCACTAACATCCCTCCTCCTTCTTCGCCGGCTGCTGCTGCTGCTGCTG
CTGCTTCGTCGACCGCCCCTGTGTCCGGCTCCCCGACGGGCTCGCTGAAG
GGTGGGCACGAGTACGGCGGAGGGGAACCTCTGGAGAGACCAGGCGACGC
CAAGAAGGCGGCAGCGGCGACTGCCGCCGCCGCCGCCGAGGACACCGCGA
AGAAACAGCTCAAGGAGGCCACCAGTTTCTGGTTGGGCAAGTGGGGGATC
AAGGCCACCAAGACGGATGCCTCAAGGGGGCGGCACAAAAGGATCACCGG
GAGCCCTCCG
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