mRNA_P-littoralis_Contig633.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: D8LK97_ECTSI (Divergent RAB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK97_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 3.200e-128 Identity = 304/586 (51.88%), Postives = 340/586 (58.02%), Query Frame = 1
Query: 1 MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSVKGTMQRVXXXXXXXXXXXXXXXXXXXXXXRRKYIQKPPQQLPGVHVPPSPKEEGDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSACTPSS----TRATXXXXXXXXXXXXSHSTSQELRRRGPGSPVAQSGTGDAPTARLLERPKKATPPTVGRYVRSGSVTNIPPXXXXXXXXXXXXXXTAPVSGSPTGSLKGGHEYGGGEP-----------LERPGDAKKAXXXXXXXXXXDTAKKQLKEATSFWLGKWGIKATKTDASRGRH-KRITGSPP 1710
M RSC RV DA CPCFR+ S+ S GA G HDMSLNFILHGEC VGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEE G K G+ K PCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISS++TL+ELRRYFS+P+HR+KLAAKK+AGMAM+LVGNKCD+PLSQRQ VGSQTGQDTAAEFG+PFVEVSAKTG NVREAFMF TTRAVGE LAR +LK+ RG ++VK TMQ+V RR+Y QK P + +P XXXXXXXXXXXXXXXXXXXXXXXX A P +RA + + SQ L++R P SPVA SGTGDA T+ LLERP+ +P V R + I T + L G G P XXXXXXXXX ++A KQL+EA+SFWL KWGIKA KTDA+R RH K GS P
Sbjct: 1 MGRSCCRRVLDALCPCFRQNRLGSSPSVSGASGE-HDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDGGDQTREEEPAVAGKTLPSGGRGKGGSTT-----KQAPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSVSTLNELRRYFSDPEHRDKLAAKKKAGMAMLLVGNKCDMPLSQRQ-VGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRG-----ATVKKTMQKVPGLQRALRTRASVLDVFKGLTGRRRYPQK---AQPVIVLP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXAAERPLQRLPSSARRGGRGGLGQGTTARAWALRAAAPPHRRHLSRAKSPSPRGLATASAAAAASQGLQQRRPESPVALSGTGDAATSSLLERPE-LSPVEVERRSEGAAFRKI----------GASTLATTTAAEDKESVLACGRRSSGTSPERTVSTXXXXXXXXXXXXXXXXXXXXXXXXEESATKQLREASSFWLDKWGIKAAKTDATRERHSKEFRGSYP 553
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A6H5KHP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP3_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.830e-118 Identity = 278/550 (50.55%), Postives = 321/550 (58.36%), Query Frame = 1
Query: 1 MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSVKGTMQRVXXXXXXXXXXXXXXXXXXXXXXRRKYIQKPPQQLPGVHVPPSPKEEGDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSACTPSSTRATXXXXXXXXXXXXSHSTSQELRRRGPGSPVAQSGTGDAPTARLLERPKKATPPTV-----GRYVRSGSVTNIPPXXXXXXXXXXXXXXTAPVSGSPTGSLKGGHEYGGGEPLERPGDAKKAXXXXXXXXXXDTAKKQLKEATSFWL 1635
M RSC R DA CPCFRR S+ S GA G HDMSLNFILHGEC VGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEE G K G+ K P ADL+VKINVYDTSGKPGYR+VNSTYLLAFDAVLFVYDISS++TL+ELR+YF+NP+HREKLAAKK+AGMAM+LVGNKCD+PLSQRQ VGSQTGQDTAAEFG+PFVEVSAKTG NVREAFMF TTRAVGE LAR +LK+ RG ++VK TMQ+V RR+Y PQ+ V + P+ N+XXXXXXXXXXXXXXXXXXXX C S +++ + Q L++R P SPVA+SGTGDA T+ LLERP+ +P V G R G + + SP ++ GG + A XXXXXXXX ++A KQL+EA+SFWL
Sbjct: 1 MGRSCCRRALDALCPCFRRHRLGSSTSVSGASGE-HDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDEGDQAREEETAVAGKTLPSGGRGKGGSTA-----KQAPHADLKVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSVSTLNELRQYFNNPEHREKLAAKKKAGMAMLLVGNKCDMPLSQRQ-VGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRG-----ATVKKTMQKVPGLQRALRTRASVLDVFTGLTGRRRY----PQKAQPVGILPAAPPTAGNAXXXXXXXXXXXXXXXXXXXXERPLQRPSSSARRGGRGGLGQGTTAQAWALRAAAPPHRCHLSRAKSSSPRGLTTAAA----AAFQGLQQRRPESPVARSGTGDAATSSLLERPE-LSPVDVERGSEGAAFRKGGASTLATTTAAEDKESVLACGRRSSGTSPERTVS----TSGGSHGDVSQGAXXXXXXXXXXXAEESATKQLREASSFWL 525
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A0W4ZI42_PNEC8 (GTP-binding protein ypt2 n=1 Tax=Pneumocystis carinii (strain B80) TaxID=1408658 RepID=A0A0W4ZI42_PNEC8) HSP 1 Score: 98.2 bits (243), Expect = 8.190e-20 Identity = 67/246 (27.24%), Postives = 109/246 (44.31%), Query Frame = 1
Query: 106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRRGLLSASSSV 843
+D + +L G+ VGK+ L R+ D FT T G+DF I+T++L + ++K+ ++DT+G+ +R + + Y +L VYD++ + +R + SN + G+ +LVGNKCD +R+ + + GQ A EFGIPF+E SAK+ NV +AF F R + +RL Q R G LL ++S+
Sbjct: 9 YDYLIKLLLIGDSGVGKSCLLLRFSDDFFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITAAYYRGAMGILIVYDVTDEKSFQNVRLWVSNVEQHAS------EGVNKILVGNKCD--WEERRVISEEQGQALAQEFGIPFLETSAKSNINVDDAF-FCLARGIKKRLIDSQENRISEGSNVLLDKANSI 199
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: M5X0Z8_PRUPE (Uncharacterized protein n=6 Tax=Prunus TaxID=3754 RepID=M5X0Z8_PRUPE) HSP 1 Score: 94.7 bits (234), Expect = 1.670e-18 Identity = 64/234 (27.35%), Postives = 105/234 (44.87%), Query Frame = 1
Query: 106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQP 807
HD + +L G+ VGK+ L R+ DG FT T G+DF I+T++L + ++K+ ++DT+G+ +R + + Y +L VYD++ ++ + +R + N + ++ K +LVGNK D+ S+R V + GQ A E+GI F+E SAKT NV E F F R + +RLA + +P
Sbjct: 12 HDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASVSVNK------ILVGNKADMDESKRA-VPASKGQALADEYGIKFLETSAKTNMNVEEVF-FSIGRDIKQRLAESDARGTEP 191
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A1Y2HP65_9FUNG (Ras family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HP65_9FUNG) HSP 1 Score: 94.4 bits (233), Expect = 2.020e-18 Identity = 61/230 (26.52%), Postives = 104/230 (45.22%), Query Frame = 1
Query: 100 STHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQ 789
ST+D + +L G+ VGK+ L R+ D FT T G+DF I+T++L + ++K+ ++DT+G+ +R + + Y +L +YD++ + + +R + N + AG+ +LVGNKCDV + ++ + + GQ+ A EFGI F+E SAK+ V EAF F + + +RL Q
Sbjct: 6 STYDHLIKLLLIGDSGVGKSCLLLRFTDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLIYDVTDERSFNNIRNWIRNIEQHAS------AGVNKILVGNKCDV--ADKKVISKEQGQELADEFGIKFIETSAKSNIGVEEAF-FSLAKDIKKRLIDSQ 180
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A7S3ACI0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACI0_9EUKA) HSP 1 Score: 92.0 bits (227), Expect = 8.050e-18 Identity = 55/226 (24.34%), Postives = 103/226 (45.58%), Query Frame = 1
Query: 103 THDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLA 780
++D+ + ++ G+ VGKT+L R+ D F + PT G+DF IKT++L ++ +++ ++DT+G+ +R + Y +L +YD++++ + +R + N D K +L+GNKCD+ + ++QV + G+ A E+G+ F+E SA+ NV +AF+ + T V LA
Sbjct: 9 SYDLQIKLMMIGDQAVGKTALLVRYADKEFHEQLLPTIGIDFKIKTIELQGKK----------------------------------------------IRLQIWDTAGQERFRNITQAYYRGAMGILLIYDVTNLKSWSNVRNWVRNIDGNTPQTVNK------ILIGNKCDI--TGQRQVTTAQGEQLAREYGMKFLETSARANTNVTDAFLTIATDVVERLLA 180
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A0L0SKN2_ALLM3 (Small GTP-binding protein domain n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SKN2_ALLM3) HSP 1 Score: 92.4 bits (228), Expect = 8.610e-18 Identity = 61/235 (25.96%), Postives = 104/235 (44.26%), Query Frame = 1
Query: 100 STHDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQ 804
ST+D + +L G+ VGK+ L R+ D FT T G+DF I+T++L + ++K+ ++DT+G+ +R + + Y +L YD++ + +R + N + G+ M+LVGNKCD + ++ + + GQ+ A EFGI FVE SAK+ V +AF F R + +RL Q +++
Sbjct: 7 STYDYLIKLLLIGDSGVGKSCLLLRFCDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLAYDVTDERSFKNIRNWIKNIEQNAS------QGVNMILVGNKCD--MGDKKVISKEQGQELADEFGIKFVETSAKSNLGVEDAF-FSLARDIKKRLIDTQAPKEE 186
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A6S8IR56_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IR56_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 9.230e-18 Identity = 60/224 (26.79%), Postives = 97/224 (43.30%), Query Frame = 1
Query: 106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERL 777
+DM + ++ G+ VGKT L R+ + F+ T G+DF IK +D+ ++K+ ++DT+G+ +R + ++Y +L VYD++ + + +R + S + K +LVGNKCD + + V + GQ AAEFGIPF EVSAK V E+F + AV +RL
Sbjct: 8 YDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDI----------------------------------------------QGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNK------ILVGNKCD--MMDEKVVSTAEGQKLAAEFGIPFAEVSAKNDIKVDESFQSLAA-AVKDRL 176
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A8C1S1Y4_CYPCA (Multiple EGF-like-domains 8 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1S1Y4_CYPCA) HSP 1 Score: 92.0 bits (227), Expect = 9.740e-18 Identity = 59/232 (25.43%), Postives = 105/232 (45.26%), Query Frame = 1
Query: 103 THDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKR 798
T+D +L G+ VGKT L R+ + F T G+DF I+T++L +++ +K+ ++DT+G+ +R + + Y ++ VYDI+S + + ++ + N + +K +++GNKCD ++ R+QV + G+ A ++GI F+E SAKT NV EAF F R + RL R+ ++
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNEKK----------------------------------------------IKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEK------MILGNKCD--MNDRRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAF-FTLARDIMARLNRKMTRK 180
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Match: A0A1D1ZIW7_9ARAE (Ras-related protein Rab-8A n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIW7_9ARAE) HSP 1 Score: 92.0 bits (227), Expect = 1.230e-17 Identity = 63/237 (26.58%), Postives = 104/237 (43.88%), Query Frame = 1
Query: 106 HDMSLNFILHGECNVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEXXXXXXXXXXXXXXXXXXXARGEGWSKAGAKQRPTKKKHVPCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSMATLDELRRYFSNPDHREKLAAKKQAGMAMVLVGNKCDVPLSQRQQVGSQTGQDTAAEFGIPFVEVSAKTGANVREAFMFVTTRAVGERLAREQLKRQQPGRR 816
+D + +L G+ VGK+ L R+ D FT T G+DF I+T++L + ++K+ ++DT+G+ +R + + Y +L VYD++ + + +R +FSN + G+ +L+GNKCD +++ + + GQ A EFGI F+E SAK NV EAF F R + +RL + QP R
Sbjct: 9 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGK----------------------------------------------RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRNWFSNIEQHAS------EGVNKILIGNKCD--WLEKKVIAKEQGQLLADEFGIKFLETSAKANTNVEEAF-FTLARDIKKRLIDNHSQDPQPRNR 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig633.1.1 >prot_P-littoralis_Contig633.1.1 ID=prot_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=570bp MPRSCYARVFDAACPCFRRWSSASTASSGGAFGSTHDMSLNFILHGECNVback to top mRNA from alignment at P-littoralis_Contig633:43696..48836+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig633.1.1 ID=mRNA_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5141bp|location=Sequence derived from alignment at P-littoralis_Contig633:43696..48836+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig633:43696..48836+ >mRNA_P-littoralis_Contig633.1.1 ID=mRNA_P-littoralis_Contig633.1.1|Name=mRNA_P-littoralis_Contig633.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1710bp|location=Sequence derived from alignment at P-littoralis_Contig633:43696..48836+ (Pylaiella littoralis U1_48)back to top |