mRNA_P-littoralis_Contig631.55.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 221 bits (563), Expect = 3.300e-67 Identity = 105/176 (59.66%), Postives = 141/176 (80.11%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKQDFNPSWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVD 528
+N+DE LPLPL Y++YVKT+ L L + + T KQ ++ +Q+VCIVY+CLAVKRNAG++ E+K AAAA+GY EIAVPGFFRWARDNDI P+ LT++++G ++ GAP+L+ +G KLW++FD AM MK+ NP WDRY+KGQ G N LPSGQTGDDAI+NLLDGL+++T G+ +
Sbjct: 3 INVDEVLPLPLVYNDYVKTSINLALENKKLFTLKQQMLFIQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSTDGAPVLYTNGKKLWTKFDAAMLKMKKFCNPIWDRYVKGQPGGN-LPSGQTGDDAINNLLDGLYSKTKGSAE 177
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 3.660e-49 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKQDFNPSWDRYI 423
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L GAP+LF DG KLW RFD MR MK+ +N WDR +
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGAPVLFTDGKKLWKRFDKVMREMKKTYNKVWDRCV 144
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.030e-44 Identity = 80/166 (48.19%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 25 LPLEYSEYVKTAAKLVLLDNED--ITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKQDFNPSWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLH 504
LPLE++ Y +T + L D +T +LL H+Q+VCIVYACL VKRNAGI+ ++K AAAAKGY++IAV GFF+W ++N WLT E MG ++++G +LF G KLW RFD MR +K+ +NP WD +++GQ G + LPSG +DAI+ LL+G++
Sbjct: 12 LPLEFNSYAETVISM-LRDRRSSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSGDAVLFTHGKKLWKRFDNIMRALKKFYNPVWDSFVEGQPG-DQLPSGSQDEDAIEYLLNGVY 175
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 120 bits (301), Expect = 4.990e-32 Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTG 321
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 120 bits (301), Expect = 3.890e-31 Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTG 321
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.690e-29 Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMR 381
M LD LPLE++ Y +T ++ + +T +LL H+Q+ IVYACLAVKRNAGI+ ++K AAAA+GY++IAVP FF+W ++N D L WLT E MG +++ G +LF +G K+W RFD +R
Sbjct: 400 MKLDGVQSLPLEFNSYAETVVSMLRDRSSGLTDAKLLKHLQNGRIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFEVMGKTSMKGGAVLFTNGEKMWKRFDKILR 530
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5K5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X3_9PHAE) HSP 1 Score: 121 bits (304), Expect = 2.540e-29 Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMR 381
M LD LPL+++ Y + ++ + +T +LL H+Q+ CIVYACLAVKRNAGI+ +++ AAAA+GY++IAVPGF + ++N D L WLT E MG S++ G +LF DG KLW RFD +R
Sbjct: 228 MKLDGVQSLPLKFNSYAEAVISMLRDRSSGLTDAKLLKHLQNGCIVYACLAVKRNAGIVSTQARHAAAAQGYKDIAVPGFIKRLQENLDKEDFFLQPWLTCEVMGKSSMKGGAVLFTDGEKLWKRFDKILR 358
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JXZ8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ8_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.450e-27 Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTG 321
M LD LPLE++ Y +T ++ + +T +LL H+Q+VCIVYACLAVKRNAGI+ ++K AAA +GY++IAVPGFF+W ++N D L WLT E MG +++ G
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISMLRDRSSGLTDAKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAPQGYKDIAVPGFFKWLQENLDKEDFFLQLWLTFEVMGKTSMKG 114
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 103 bits (256), Expect = 6.920e-25 Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNED--ITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTG 321
M LD LPLE++ Y +T + L D +T +LL H+Q+VCIVYACLAVKRNAGI+ ++K AA AKGY++IAVPGFF+W ++N WLT E MG ++++G
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISM-LRDKRSSGLTDTKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSG 115
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Match: A0A6H5JF32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF32_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.680e-24 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTG 321
M LD LPL+++ Y +T ++ + +T +LL +Q+VCIVYACLAVKRNAG++ ++K A AA+GY++IAVPGFF+W ++N D L WLT E MG +++ G
Sbjct: 4 MKLDGVQSLPLKFNSYAETVISMLRDRSSGLTDAKLLKPLQNVCIVYACLAVKRNAGMVFTQAKHATAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFEVMGKTSMKG 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig631.55.1 >prot_P-littoralis_Contig631.55.1 ID=prot_P-littoralis_Contig631.55.1|Name=mRNA_P-littoralis_Contig631.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLback to top mRNA from alignment at P-littoralis_Contig631:169100..170758- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig631.55.1 ID=mRNA_P-littoralis_Contig631.55.1|Name=mRNA_P-littoralis_Contig631.55.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1659bp|location=Sequence derived from alignment at P-littoralis_Contig631:169100..170758- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig631:169100..170758- >mRNA_P-littoralis_Contig631.55.1 ID=mRNA_P-littoralis_Contig631.55.1|Name=mRNA_P-littoralis_Contig631.55.1|organism=Pylaiella littoralis U1_48|type=CDS|length=528bp|location=Sequence derived from alignment at P-littoralis_Contig631:169100..170758- (Pylaiella littoralis U1_48)back to top |